RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 DCW1P36091 449 aa3.99□□□□□ -1.77
snR53snR53 YMR1P47147 688 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
snR53snR53 GYP5Q12344 894 aa3.98□□□□□ -1.77
snR53snR53 TRK1P12685 1235 aa3.97□□□□□ -1.77
snR53snR53 ARH1P48360 493 aa3.96□□□□□ -1.78
snR53snR53 YAH1Q12184 172 aaKnown RBP3.95□□□□□ -1.78
snR53snR53 SPT23P35210 1082 aa3.94□□□□□ -1.78
snR53snR53 GBP2P25555 427 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
snR53snR53 STS1P38637 319 aa3.9□□□□□ -1.79
snR53snR53 VPS29P38759 282 aa3.89□□□□□ -1.79
snR53snR53 GAR1P28007 205 aaKnown RBP3.88□□□□□ -1.79
snR53snR53 MID1P41821 548 aa3.86□□□□□ -1.79
snR53snR53 PSD2P53037 1138 aaKnown RBP3.85□□□□□ -1.79
snR53snR53 PTC2P39966 464 aaKnown RBP3.84□□□□□ -1.79
snR53snR53 PEX29Q03370 554 aa3.83□□□□□ -1.8
snR53snR53 YML082WQ04533 649 aaKnown RBP3.82□□□□□ -1.8
snR53snR53 HAP5Q02516 242 aa3.81□□□□□ -1.8
snR53snR53 BNI4P53858 892 aa3.79□□□□□ -1.8
snR53snR53 AMS1P22855 1083 aa3.78□□□□□ -1.8
snR53snR53 RTG3P38165 486 aa3.78□□□□□ -1.8
snR53snR53 YLR271WQ06152 274 aa3.75□□□□□ -1.81
snR53snR53 BRE2P43132 505 aa3.7□□□□□ -1.82
snR53snR53 GCR2Q01722 534 aa3.68□□□□□ -1.82
snR53snR53 GYP1Q08484 637 aa3.68□□□□□ -1.82
snR53snR53 GRE2Q12068 342 aaKnown RBP3.68□□□□□ -1.82
snR53snR53 MTC5Q03897 1148 aa3.67□□□□□ -1.82
snR53snR53 YPR015CQ12531 247 aa3.65□□□□□ -1.83
snR53snR53 RCR1P38212 213 aa3.62□□□□□ -1.83
snR53snR53 MPC54Q08550 464 aa3.62□□□□□ -1.83
snR53snR53 SDH2P21801 266 aa3.61□□□□□ -1.83
snR53snR53 NMA111P53920 997 aa3.61□□□□□ -1.83
snR53snR53 YEL077CQ3E7X8 1277 aa3.61□□□□□ -1.83
snR53snR53 ATH1P48016 1211 aa3.6□□□□□ -1.83
snR53snR53 NST1P53935 1240 aa3.59□□□□□ -1.83
snR53snR53 MET22P32179 357 aa3.58□□□□□ -1.84
snR53snR53 GUT1P32190 709 aa3.57□□□□□ -1.84
snR53snR53 AIR1P40507 360 aaKnown RBP3.57□□□□□ -1.84
snR53snR53 BFR2Q06631 534 aaKnown RBP3.57□□□□□ -1.84
snR53snR53 CST9Q06032 482 aa3.56□□□□□ -1.84
snR53snR53 MPH3P0CE00 602 aa3.55□□□□□ -1.84
snR53snR53 RAM1P22007 431 aa3.55□□□□□ -1.84
snR53snR53 AI4P03878 556 aa3.54□□□□□ -1.84
snR53snR53 ILV3P39522 585 aaKnown RBP3.53□□□□□ -1.84
snR53snR53 SAS4Q04003 481 aa3.53□□□□□ -1.84
snR53snR53 ENV9Q08651 330 aa3.53□□□□□ -1.84
snR53snR53 SOL3P38858 249 aa3.52□□□□□ -1.85
snR53snR53 YDR444WQ04093 687 aa3.5□□□□□ -1.85
snR53snR53 CLA4P48562 842 aa3.49□□□□□ -1.85
snR53snR53 DPL1Q05567 589 aa3.49□□□□□ -1.85
snR53snR53 YDL176WQ12027 708 aa3.49□□□□□ -1.85
snR53snR53 MRF1P30775 413 aaPredicted RBP3.48□□□□□ -1.85
snR53snR53 MIF2P35201 549 aa3.48□□□□□ -1.85
snR53snR53 PTC3P34221 468 aaKnown RBP3.46□□□□□ -1.86
snR53snR53 ARP8Q12386 881 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
snR53snR53 ISU2Q12056 156 aa3.43□□□□□ -1.86
snR53snR53 SLI15P38283 698 aa3.42□□□□□ -1.86
snR53snR53 PDR1P12383 1068 aa3.41□□□□□ -1.86
snR53snR53 ERG12P07277 443 aa3.4□□□□□ -1.87
snR53snR53 EDS1P38073 919 aa3.4□□□□□ -1.87
snR53snR53 LCB5Q06147 687 aaKnown RBP3.4□□□□□ -1.87
snR53snR53 CST6P40535 587 aa3.39□□□□□ -1.87
snR53snR53 MGA2P40578 1113 aa3.39□□□□□ -1.87
snR53snR53 CDC4P07834 779 aa3.38□□□□□ -1.87
snR53snR53 NRD1P53617 575 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
snR53snR53 TRK2P28584 889 aa3.34□□□□□ -1.87
snR53snR53 YGR273CP53329 174 aa3.33□□□□□ -1.88
snR53snR53 LSB3P43603 459 aaKnown RBP3.32□□□□□ -1.88
snR53snR53 SSP1P38871 571 aa3.31□□□□□ -1.88
snR53snR53 FRK1Q03002 865 aaPredicted RBP3.31□□□□□ -1.88
snR53snR53 LAM6Q08001 693 aa3.31□□□□□ -1.88
snR53snR53 PRT1P06103 763 aaKnown RBP3.3□□□□□ -1.88
snR53snR53 CDC73Q06697 393 aa3.3□□□□□ -1.88
snR53snR53 CAF120P53836 1060 aa3.29□□□□□ -1.88
snR53snR53 BUD20Q08004 166 aaPredicted RBP3.29□□□□□ -1.88
snR53snR53 RRD1P40454 393 aaKnown RBP3.27□□□□□ -1.89
snR53snR53 MAK11P20484 414 aaKnown RBP3.26□□□□□ -1.89
snR53snR53 YGR035CP53222 116 aa3.26□□□□□ -1.89
snR53snR53 COQ8P27697 501 aa3.24□□□□□ -1.89
snR53snR53 ASH1P34233 588 aa3.24□□□□□ -1.89
snR53snR53 PUS1Q12211 544 aaKnown RBP3.24□□□□□ -1.89
snR53snR53 ICP55P40051 511 aa3.23□□□□□ -1.89
snR53snR53 HED1Q03937 162 aa3.22□□□□□ -1.89
snR53snR53 BDP1P46678 594 aa3.21□□□□□ -1.9
snR53snR53 SPT16P32558 1035 aaKnown RBP3.2□□□□□ -1.9
snR53snR53 ACO2P39533 789 aa3.2□□□□□ -1.9
snR53snR53 STR2P47164 639 aa3.19□□□□□ -1.9
snR53snR53 HST3P53687 447 aa3.19□□□□□ -1.9
snR53snR53 ISM1P48526 1002 aa3.18□□□□□ -1.9
snR53snR53 HPF1Q05164 967 aa3.18□□□□□ -1.9
snR53snR53 AFT1P22149 690 aa3.17□□□□□ -1.9
snR53snR53 MET32Q12041 191 aa3.17□□□□□ -1.9
snR53snR53 KEX1P09620 729 aa3.16□□□□□ -1.9
snR53snR53 YJR115WP47152 169 aa3.15□□□□□ -1.91
snR53snR53 YPR204WQ08995 1032 aa3.13□□□□□ -1.91
snR53snR53 YRR1Q12172 810 aa3.13□□□□□ -1.91
snR53snR53 RAM2P29703 316 aa3.12□□□□□ -1.91
snR53snR53 GCD11P32481 527 aaKnown RBP3.11□□□□□ -1.91
snR53snR53 YIR007WP40566 764 aa3.1□□□□□ -1.91
snR53snR53 RPP1BP10622 106 aaKnown RBP3.09□□□□□ -1.91
snR53snR53 NUD1P32336 851 aa3.09□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms