RNA–Protein interactions for RNA: snR17a

snR17a, Transcript of Small nucleolar RNA (snoRNA) U3, yeastyeast

Gene snR17a, Length 333 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR17asnR17a EDS1P38073 919 aa7.28□□□□□ -1.24
snR17asnR17a TFG1P41895 735 aaPredicted RBP7.28□□□□□ -1.24
snR17asnR17a ATH1P48016 1211 aa7.28□□□□□ -1.24
snR17asnR17a NOP53Q12080 455 aaKnown RBP7.28□□□□□ -1.24
snR17asnR17a NCR1Q12200 1170 aa7.28□□□□□ -1.24
snR17asnR17a BMT6Q12291 365 aa7.27□□□□□ -1.25
snR17asnR17a GUT1P32190 709 aa7.26□□□□□ -1.25
snR17asnR17a PTC4P38089 393 aa7.25□□□□□ -1.25
snR17asnR17a YEL023CP39992 682 aa7.25□□□□□ -1.25
snR17asnR17a DAN4P47179 1161 aa7.22□□□□□ -1.25
snR17asnR17a SET1P38827 1080 aaKnown RBP7.17□□□□□ -1.26
snR17asnR17a YDL129WQ07555 291 aa7.16□□□□□ -1.26
snR17asnR17a SAP30P38429 201 aa7.12□□□□□ -1.27
snR17asnR17a SOL3P38858 249 aa7.1□□□□□ -1.27
snR17asnR17a AI4P03878 556 aa7.09□□□□□ -1.27
snR17asnR17a MPH3P0CE00 602 aa7.09□□□□□ -1.27
snR17asnR17a IFH1P39520 1085 aa7.09□□□□□ -1.27
snR17asnR17a YGR273CP53329 174 aa7.09□□□□□ -1.27
snR17asnR17a NST1P53935 1240 aa7.09□□□□□ -1.27
snR17asnR17a PML39Q03760 334 aa7.09□□□□□ -1.27
snR17asnR17a CHL1P22516 861 aaPredicted RBP7.03□□□□□ -1.28
snR17asnR17a PRE3P38624 215 aa7.02□□□□□ -1.29
snR17asnR17a PEX29Q03370 554 aa7.01□□□□□ -1.29
snR17asnR17a MID1P41821 548 aa7□□□□□ -1.29
snR17asnR17a ILV3P39522 585 aaKnown RBP6.98□□□□□ -1.29
snR17asnR17a ELP4Q02884 456 aaKnown RBP6.98□□□□□ -1.29
snR17asnR17a KEX1P09620 729 aa6.96□□□□□ -1.3
snR17asnR17a ARH1P48360 493 aa6.96□□□□□ -1.3
snR17asnR17a YPR148CQ06523 435 aa6.96□□□□□ -1.3
snR17asnR17a DMA1P38823 416 aa6.94□□□□□ -1.3
snR17asnR17a VHR2P40041 505 aa6.94□□□□□ -1.3
snR17asnR17a UBP14P38237 781 aaKnown RBP6.93□□□□□ -1.3
snR17asnR17a SLI15P38283 698 aa6.93□□□□□ -1.3
snR17asnR17a YLR326WQ06170 240 aaKnown RBP6.92□□□□□ -1.3
snR17asnR17a RAD54P32863 898 aa6.91□□□□□ -1.3
snR17asnR17a BCK2P33306 851 aa6.91□□□□□ -1.3
snR17asnR17a VPS70P47161 811 aa6.91□□□□□ -1.3
snR17asnR17a MPC54Q08550 464 aa6.91□□□□□ -1.3
snR17asnR17a SPT23P35210 1082 aa6.9□□□□□ -1.3
snR17asnR17a REF2P42073 533 aaPredicted RBP6.9□□□□□ -1.3
snR17asnR17a HAP5Q02516 242 aa6.9□□□□□ -1.3
snR17asnR17a RPP1BP10622 106 aaKnown RBP6.89□□□□□ -1.31
snR17asnR17a KIC1P38692 1080 aa6.89□□□□□ -1.31
snR17asnR17a DPL1Q05567 589 aa6.89□□□□□ -1.31
snR17asnR17a YDR344CQ05510 147 aa6.88□□□□□ -1.31
snR17asnR17a PCS60P38137 543 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
snR17asnR17a NMA111P53920 997 aa6.87□□□□□ -1.31
snR17asnR17a CKB1P43639 278 aa6.85□□□□□ -1.31
snR17asnR17a BNI4P53858 892 aa6.85□□□□□ -1.31
snR17asnR17a VRP1P37370 817 aa6.84□□□□□ -1.31
snR17asnR17a ISU2Q12056 156 aa6.84□□□□□ -1.31
snR17asnR17a MAK21Q12176 1025 aaKnown RBP6.84□□□□□ -1.31
snR17asnR17a RQC2Q12532 1038 aaKnown RBP6.84□□□□□ -1.31
snR17asnR17a PTC2P39966 464 aaKnown RBP6.83□□□□□ -1.32
snR17asnR17a YDR090CQ03193 310 aa6.83□□□□□ -1.32
snR17asnR17a CDC73Q06697 393 aa6.82□□□□□ -1.32
snR17asnR17a COX6P00427 148 aa6.8□□□□□ -1.32
snR17asnR17a YML082WQ04533 649 aaKnown RBP6.8□□□□□ -1.32
snR17asnR17a XDJ1P39102 459 aa6.79□□□□□ -1.32
snR17asnR17a SAS10Q12136 610 aaPredicted RBP6.79□□□□□ -1.32
snR17asnR17a PEX21P50091 288 aa6.76□□□□□ -1.33
snR17asnR17a CSC1Q06538 782 aa6.75□□□□□ -1.33
snR17asnR17a PBS2P08018 668 aa6.74□□□□□ -1.33
snR17asnR17a TFB4Q12004 338 aa6.72□□□□□ -1.33
snR17asnR17a ORC6P38826 435 aa6.7□□□□□ -1.34
snR17asnR17a GAP1P19145 602 aaPredicted RBP6.69□□□□□ -1.34
snR17asnR17a RAM1P22007 431 aa6.68□□□□□ -1.34
snR17asnR17a YRR1Q12172 810 aa6.68□□□□□ -1.34
snR17asnR17a PDR1P12383 1068 aa6.67□□□□□ -1.34
snR17asnR17a SPB4P25808 606 aaPredicted RBP6.67□□□□□ -1.34
snR17asnR17a MAM3Q12296 706 aa6.67□□□□□ -1.34
snR17asnR17a DSF2P38213 736 aa6.66□□□□□ -1.34
snR17asnR17a TUM1Q08686 304 aaKnown RBP6.66□□□□□ -1.34
snR17asnR17a GYP1Q08484 637 aa6.65□□□□□ -1.34
snR17asnR17a YPR015CQ12531 247 aa6.65□□□□□ -1.34
snR17asnR17a MVP1P40959 511 aaKnown RBP6.64□□□□□ -1.35
snR17asnR17a SAS4Q04003 481 aa6.63□□□□□ -1.35
snR17asnR17a DPS1P04802 557 aaKnown RBP6.62□□□□□ -1.35
snR17asnR17a RGR1P19263 1082 aa6.62□□□□□ -1.35
snR17asnR17a PSE1P32337 1089 aaKnown RBP6.62□□□□□ -1.35
snR17asnR17a NPL4P33755 580 aa6.62□□□□□ -1.35
snR17asnR17a NUD1P32336 851 aa6.6□□□□□ -1.35
snR17asnR17a YPR109WQ06104 294 aa6.6□□□□□ -1.35
snR17asnR17a IES2P40154 320 aa6.59□□□□□ -1.35
snR17asnR17a PRT1P06103 763 aaKnown RBP6.57□□□□□ -1.36
snR17asnR17a CLB5P30283 435 aa6.57□□□□□ -1.36
snR17asnR17a BUD20Q08004 166 aaPredicted RBP6.57□□□□□ -1.36
snR17asnR17a MRF1P30775 413 aaPredicted RBP6.56□□□□□ -1.36
snR17asnR17a STR2P47164 639 aa6.56□□□□□ -1.36
snR17asnR17a ISM1P48526 1002 aa6.56□□□□□ -1.36
snR17asnR17a NUP42P49686 430 aaKnown RBP6.54□□□□□ -1.36
snR17asnR17a GCD11P32481 527 aaKnown RBP6.53□□□□□ -1.36
snR17asnR17a YEL077CQ3E7X8 1277 aa6.51□□□□□ -1.37
snR17asnR17a DIT2P21595 489 aa6.5□□□□□ -1.37
snR17asnR17a AMS1P22855 1083 aa6.5□□□□□ -1.37
snR17asnR17a PAT1P25644 796 aaKnown RBP6.5□□□□□ -1.37
snR17asnR17a TEA1P47988 759 aa6.5□□□□□ -1.37
snR17asnR17a SPT16P32558 1035 aaKnown RBP6.49□□□□□ -1.37
snR17asnR17a ERG12P07277 443 aa6.48□□□□□ -1.37
snR17asnR17a RAS1P01119 309 aa6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms