RNA–Protein interactions for RNA: YPR103W

PRE2, Transcript of Beta 5 subunit of the 20S proteasome, yeastyeast

Gene PRE2, Length 864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE2YPR103W YDR090CQ03193 310 aa10.67□□□□□ -0.7
PRE2YPR103W YGR273CP53329 174 aa10.66□□□□□ -0.7
PRE2YPR103W NUP42P49686 430 aaKnown RBP10.65□□□□□ -0.7
PRE2YPR103W YLR326WQ06170 240 aaKnown RBP10.65□□□□□ -0.7
PRE2YPR103W MAK21Q12176 1025 aaKnown RBP10.65□□□□□ -0.7
PRE2YPR103W SET4P42948 560 aa10.64□□□□□ -0.71
PRE2YPR103W DIT2P21595 489 aa10.63□□□□□ -0.71
PRE2YPR103W YNR021WP53723 404 aaKnown RBP10.63□□□□□ -0.71
PRE2YPR103W NST1P53935 1240 aa10.63□□□□□ -0.71
PRE2YPR103W DCW1P36091 449 aa10.62□□□□□ -0.71
PRE2YPR103W WSC3Q12215 556 aa10.58□□□□□ -0.72
PRE2YPR103W KEX1P09620 729 aa10.56□□□□□ -0.72
PRE2YPR103W GLC3P32775 704 aa10.56□□□□□ -0.72
PRE2YPR103W ABP1P15891 592 aaKnown RBP10.55□□□□□ -0.72
PRE2YPR103W PCS60P38137 543 aaKnown RBP RIP-Chip data10.54□□□□□ -0.72not detected
PRE2YPR103W MSB4Q12317 492 aa10.54□□□□□ -0.72
PRE2YPR103W HTA1P04911 132 aaKnown RBP10.52□□□□□ -0.73
PRE2YPR103W HTA2P04912 132 aa10.52□□□□□ -0.73
PRE2YPR103W ILV3P39522 585 aaKnown RBP10.52□□□□□ -0.73
PRE2YPR103W KIN1P13185 1064 aa10.51□□□□□ -0.73
PRE2YPR103W DMA2P53924 522 aa10.51□□□□□ -0.73
PRE2YPR103W YBL029C-AQ3E756 94 aa10.5□□□□□ -0.73
PRE2YPR103W RAD54P32863 898 aa10.49□□□□□ -0.73
PRE2YPR103W AIM7Q12156 149 aa10.48□□□□□ -0.73
PRE2YPR103W MPH3P0CE00 602 aa10.47□□□□□ -0.73
PRE2YPR103W VNX1P42839 908 aa10.47□□□□□ -0.73
PRE2YPR103W AI4P03878 556 aa10.45□□□□□ -0.74
PRE2YPR103W KIC1P38692 1080 aa10.45□□□□□ -0.74
PRE2YPR103W TRP5P00931 707 aaKnown RBP10.43□□□□□ -0.74
PRE2YPR103W YEL023CP39992 682 aa10.43□□□□□ -0.74
PRE2YPR103W EAP1P36041 632 aaKnown RBP10.41□□□□□ -0.74
PRE2YPR103W ORC6P38826 435 aa10.39□□□□□ -0.75
PRE2YPR103W TIF11P38912 153 aaKnown RBP10.38□□□□□ -0.75
PRE2YPR103W DAN4P47179 1161 aa10.38□□□□□ -0.75
PRE2YPR103W ATF2P53296 535 aa10.38□□□□□ -0.75
PRE2YPR103W PSE1P32337 1089 aaKnown RBP10.37□□□□□ -0.75
PRE2YPR103W ULI1P43604 169 aa10.37□□□□□ -0.75
PRE2YPR103W PTC4P38089 393 aa10.36□□□□□ -0.75
PRE2YPR103W SLI15P38283 698 aa10.36□□□□□ -0.75
PRE2YPR103W IOC2Q12072 812 aa10.35□□□□□ -0.75
PRE2YPR103W SPP1Q03012 353 aa10.34□□□□□ -0.75
PRE2YPR103W UBP9P39967 754 aa10.33□□□□□ -0.76
PRE2YPR103W GUA1P38625 525 aaKnown RBP10.32□□□□□ -0.76
PRE2YPR103W JIP4Q03361 876 aa10.31□□□□□ -0.76
PRE2YPR103W GAP1P19145 602 aaPredicted RBP10.3□□□□□ -0.76
PRE2YPR103W RGR1P19263 1082 aa10.28□□□□□ -0.76
PRE2YPR103W CDC73Q06697 393 aa10.27□□□□□ -0.77
PRE2YPR103W MVP1P40959 511 aaKnown RBP10.25□□□□□ -0.77
PRE2YPR103W YNL035CP53962 389 aaKnown RBP10.24□□□□□ -0.77
PRE2YPR103W MID1P41821 548 aa10.22□□□□□ -0.77
PRE2YPR103W TEA1P47988 759 aa10.2□□□□□ -0.78
PRE2YPR103W CSC1Q06538 782 aa10.2□□□□□ -0.78
PRE2YPR103W LDB19Q12502 818 aa10.2□□□□□ -0.78
PRE2YPR103W RTG1P32607 177 aa10.19□□□□□ -0.78
PRE2YPR103W PML39Q03760 334 aa10.19□□□□□ -0.78
PRE2YPR103W HPC2Q01448 625 aa10.17□□□□□ -0.78
PRE2YPR103W YPR109WQ06104 294 aa10.17□□□□□ -0.78
PRE2YPR103W KTR1P27810 393 aaKnown RBP10.14□□□□□ -0.79
PRE2YPR103W SEC61P32915 480 aa10.14□□□□□ -0.79
PRE2YPR103W CSN12P47130 423 aa10.14□□□□□ -0.79
PRE2YPR103W MPC54Q08550 464 aa10.14□□□□□ -0.79
PRE2YPR103W RPP1BP10622 106 aaKnown RBP10.13□□□□□ -0.79
PRE2YPR103W BUD31P25337 157 aaPredicted RBP10.13□□□□□ -0.79
PRE2YPR103W TFB4Q12004 338 aa10.13□□□□□ -0.79
PRE2YPR103W CLB5P30283 435 aa10.12□□□□□ -0.79
PRE2YPR103W TFB3Q03290 321 aa10.12□□□□□ -0.79
PRE2YPR103W DPL1Q05567 589 aa10.12□□□□□ -0.79
PRE2YPR103W NIS1P53939 407 aa10.11□□□□□ -0.79
PRE2YPR103W TYW1Q08960 810 aaKnown RBP10.09□□□□□ -0.79
PRE2YPR103W TUM1Q08686 304 aaKnown RBP10.08□□□□□ -0.8
PRE2YPR103W FPK1P53739 893 aa10.07□□□□□ -0.8
PRE2YPR103W PEX29Q03370 554 aa10.07□□□□□ -0.8
PRE2YPR103W NCR1Q12200 1170 aa10.07□□□□□ -0.8
PRE2YPR103W PKC1P24583 1151 aa10.06□□□□□ -0.8
PRE2YPR103W PEX21P50091 288 aa10.06□□□□□ -0.8
PRE2YPR103W SSA2P10592 639 aaKnown RBP10.05□□□□□ -0.8
PRE2YPR103W HGH1P48362 394 aaKnown RBP10.05□□□□□ -0.8
PRE2YPR103W RLF2Q12495 606 aa10.05□□□□□ -0.8
PRE2YPR103W NMA111P53920 997 aa10.04□□□□□ -0.8
PRE2YPR103W YDL129WQ07555 291 aa10.04□□□□□ -0.8
PRE2YPR103W ISU2Q12056 156 aa10.04□□□□□ -0.8
PRE2YPR103W YRR1Q12172 810 aa10.04□□□□□ -0.8
PRE2YPR103W SIT4P20604 311 aa10.03□□□□□ -0.8
PRE2YPR103W FKH1P40466 484 aa10.03□□□□□ -0.8
PRE2YPR103W HST2P53686 357 aa10.03□□□□□ -0.8
PRE2YPR103W SCJ1P25303 377 aa10.02□□□□□ -0.81
PRE2YPR103W YDR344CQ05510 147 aa10.01□□□□□ -0.81
PRE2YPR103W BRL1P38770 471 aa10□□□□□ -0.81
PRE2YPR103W GLN1P32288 370 aaKnown RBP9.99□□□□□ -0.81
PRE2YPR103W TFG1P41895 735 aaPredicted RBP9.99□□□□□ -0.81
PRE2YPR103W YMR196WQ04336 1088 aa9.98□□□□□ -0.81
PRE2YPR103W MMP1Q12372 583 aa9.98□□□□□ -0.81
PRE2YPR103W ESS1P22696 170 aa9.96□□□□□ -0.82
PRE2YPR103W AIR2Q12476 344 aaKnown RBP9.95□□□□□ -0.82
PRE2YPR103W PDR1P12383 1068 aa9.94□□□□□ -0.82
PRE2YPR103W YJU3P28321 313 aa9.94□□□□□ -0.82
PRE2YPR103W SAP30P38429 201 aa9.94□□□□□ -0.82
PRE2YPR103W PKH3Q03306 898 aaPredicted RBP9.92□□□□□ -0.82
PRE2YPR103W ARH1P48360 493 aa9.91□□□□□ -0.82
PRE2YPR103W HAP5Q02516 242 aa9.91□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms