RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeastyeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC8YPR055W ATH1P48016 1211 aa2.45□□□□□ -2.02
SEC8YPR055W RTG1P32607 177 aa2.43□□□□□ -2.02
SEC8YPR055W IOC2Q12072 812 aa2.43□□□□□ -2.02
SEC8YPR055W VPS70P47161 811 aa2.43□□□□□ -2.02
SEC8YPR055W SOL3P38858 249 aa2.42□□□□□ -2.02
SEC8YPR055W YEL023CP39992 682 aa2.42□□□□□ -2.02
SEC8YPR055W MSB4Q12317 492 aa2.42□□□□□ -2.02
SEC8YPR055W HTA1P04911 132 aaKnown RBP2.42□□□□□ -2.02
SEC8YPR055W HTA2P04912 132 aa2.42□□□□□ -2.02
SEC8YPR055W XDJ1P39102 459 aa2.42□□□□□ -2.02
SEC8YPR055W GUT1P32190 709 aa2.41□□□□□ -2.02
SEC8YPR055W CHL1P22516 861 aaPredicted RBP2.41□□□□□ -2.02
SEC8YPR055W ILV3P39522 585 aaKnown RBP2.41□□□□□ -2.02
SEC8YPR055W VHR2P40041 505 aa2.41□□□□□ -2.02
SEC8YPR055W EAP1P36041 632 aaKnown RBP2.4□□□□□ -2.03
SEC8YPR055W MID1P41821 548 aa2.39□□□□□ -2.03
SEC8YPR055W YDR344CQ05510 147 aa2.39□□□□□ -2.03
SEC8YPR055W RQC2Q12532 1038 aaKnown RBP2.39□□□□□ -2.03
SEC8YPR055W YGR273CP53329 174 aa2.39□□□□□ -2.03
SEC8YPR055W NST1P53935 1240 aa2.39□□□□□ -2.03
SEC8YPR055W GBP2P25555 427 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
SEC8YPR055W DAN4P47179 1161 aa2.38□□□□□ -2.03
SEC8YPR055W PML39Q03760 334 aa2.38□□□□□ -2.03
SEC8YPR055W YNL035CP53962 389 aaKnown RBP2.38□□□□□ -2.03
SEC8YPR055W PTC4P38089 393 aa2.37□□□□□ -2.03
SEC8YPR055W SAP30P38429 201 aa2.37□□□□□ -2.03
SEC8YPR055W UBP14P38237 781 aaKnown RBP2.37□□□□□ -2.03
SEC8YPR055W YLR326WQ06170 240 aaKnown RBP2.37□□□□□ -2.03
SEC8YPR055W ABP1P15891 592 aaKnown RBP2.37□□□□□ -2.03
SEC8YPR055W KEX1P09620 729 aa2.36□□□□□ -2.03
SEC8YPR055W YPR148CQ06523 435 aa2.36□□□□□ -2.03
SEC8YPR055W JIP4Q03361 876 aa2.35□□□□□ -2.03
SEC8YPR055W SAS10Q12136 610 aaPredicted RBP2.35□□□□□ -2.03
SEC8YPR055W VRP1P37370 817 aa2.35□□□□□ -2.03
SEC8YPR055W PCS60P38137 543 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03 RIP-Chip
SEC8YPR055W SLI15P38283 698 aa2.35□□□□□ -2.03
SEC8YPR055W MPH3P0CE00 602 aa2.35□□□□□ -2.03
SEC8YPR055W SEC61P32915 480 aa2.35□□□□□ -2.03
SEC8YPR055W YDR090CQ03193 310 aa2.35□□□□□ -2.03
SEC8YPR055W NOP53Q12080 455 aaKnown RBP2.35□□□□□ -2.03
SEC8YPR055W SPB4P25808 606 aaPredicted RBP2.34□□□□□ -2.03
SEC8YPR055W REF2P42073 533 aaPredicted RBP2.34□□□□□ -2.03
SEC8YPR055W CDC73Q06697 393 aa2.34□□□□□ -2.03
SEC8YPR055W AI4P03878 556 aa2.34□□□□□ -2.04
SEC8YPR055W RAD54P32863 898 aa2.34□□□□□ -2.04
SEC8YPR055W IFH1P39520 1085 aa2.34□□□□□ -2.04
SEC8YPR055W PEX29Q03370 554 aa2.34□□□□□ -2.04
SEC8YPR055W YDL129WQ07555 291 aa2.34□□□□□ -2.04
SEC8YPR055W PBS2P08018 668 aa2.33□□□□□ -2.04
SEC8YPR055W MPC54Q08550 464 aa2.33□□□□□ -2.04
SEC8YPR055W PRE3P38624 215 aa2.32□□□□□ -2.04
SEC8YPR055W KIC1P38692 1080 aa2.32□□□□□ -2.04
SEC8YPR055W IES2P40154 320 aa2.31□□□□□ -2.04
SEC8YPR055W CKB1P43639 278 aa2.31□□□□□ -2.04
SEC8YPR055W ELP4Q02884 456 aaKnown RBP2.31□□□□□ -2.04
SEC8YPR055W NMA111P53920 997 aa2.3□□□□□ -2.04
SEC8YPR055W YPL062WQ02781 134 aa2.3□□□□□ -2.04
SEC8YPR055W COX6P00427 148 aa2.3□□□□□ -2.04
SEC8YPR055W MAM3Q12296 706 aa2.3□□□□□ -2.04
SEC8YPR055W DIT2P21595 489 aa2.29□□□□□ -2.04
SEC8YPR055W DPL1Q05567 589 aa2.29□□□□□ -2.04
SEC8YPR055W PDR1P12383 1068 aa2.29□□□□□ -2.04
SEC8YPR055W DSF2P38213 736 aa2.28□□□□□ -2.04
SEC8YPR055W ORC6P38826 435 aa2.28□□□□□ -2.04
SEC8YPR055W TUM1Q08686 304 aaKnown RBP2.28□□□□□ -2.04
SEC8YPR055W NUP42P49686 430 aaKnown RBP2.27□□□□□ -2.05
SEC8YPR055W HAP5Q02516 242 aa2.27□□□□□ -2.05
SEC8YPR055W YRR1Q12172 810 aa2.27□□□□□ -2.05
SEC8YPR055W GLC3P32775 704 aa2.27□□□□□ -2.05
SEC8YPR055W ARH1P48360 493 aa2.27□□□□□ -2.05
SEC8YPR055W PEX21P50091 288 aa2.26□□□□□ -2.05
SEC8YPR055W MAK21Q12176 1025 aaKnown RBP2.26□□□□□ -2.05
SEC8YPR055W YPR015CQ12531 247 aa2.26□□□□□ -2.05
SEC8YPR055W MVP1P40959 511 aaKnown RBP2.26□□□□□ -2.05
SEC8YPR055W RGR1P19263 1082 aa2.25□□□□□ -2.05
SEC8YPR055W YPR109WQ06104 294 aa2.25□□□□□ -2.05
SEC8YPR055W ISU2Q12056 156 aa2.25□□□□□ -2.05
SEC8YPR055W GAP1P19145 602 aaPredicted RBP2.24□□□□□ -2.05
SEC8YPR055W PTC2P39966 464 aaKnown RBP2.24□□□□□ -2.05
SEC8YPR055W NUD1P32336 851 aa2.23□□□□□ -2.05
SEC8YPR055W SPT23P35210 1082 aa2.23□□□□□ -2.05
SEC8YPR055W STR2P47164 639 aa2.23□□□□□ -2.05
SEC8YPR055W ISM1P48526 1002 aa2.23□□□□□ -2.05
SEC8YPR055W CSC1Q06538 782 aa2.23□□□□□ -2.05
SEC8YPR055W ERF2Q06551 359 aa2.23□□□□□ -2.05
SEC8YPR055W RAM1P22007 431 aa2.23□□□□□ -2.05
SEC8YPR055W BNI4P53858 892 aa2.23□□□□□ -2.05
SEC8YPR055W RPP1BP10622 106 aaKnown RBP2.22□□□□□ -2.05
SEC8YPR055W ATF2P53296 535 aa2.22□□□□□ -2.05
SEC8YPR055W KEX2P13134 814 aa2.22□□□□□ -2.05
SEC8YPR055W SCJ1P25303 377 aa2.22□□□□□ -2.05
SEC8YPR055W NIS1P53939 407 aa2.22□□□□□ -2.05
SEC8YPR055W TYW1Q08960 810 aaKnown RBP2.22□□□□□ -2.05
SEC8YPR055W PSE1P32337 1089 aaKnown RBP2.21□□□□□ -2.06
SEC8YPR055W TEA1P47988 759 aa2.21□□□□□ -2.06
SEC8YPR055W TFB4Q12004 338 aa2.21□□□□□ -2.06
SEC8YPR055W GCD11P32481 527 aaKnown RBP2.21□□□□□ -2.06
SEC8YPR055W SRC1Q03707 834 aa2.21□□□□□ -2.06
SEC8YPR055W BUD20Q08004 166 aaPredicted RBP2.21□□□□□ -2.06
SEC8YPR055W LEU3P08638 886 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms