RNA–Protein interactions for RNA: YPR029C

APL4, Transcript of Gamma-adaptin, yeast

Gene APL4, Length 2,499 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL4	YPR029C	SSA4	P22202	642 aa	Known RBP	4.78	□□□□□ -1.64
APL4	YPR029C	YLR271W	Q06152	274 aa		4.78	□□□□□ -1.64
APL4	YPR029C	GLC3	P32775	704 aa		4.77	□□□□□ -1.65
APL4	YPR029C	TOM20	P35180	183 aa		4.77	□□□□□ -1.65
APL4	YPR029C	TY4A-J	P47023	414 aa		4.77	□□□□□ -1.65
APL4	YPR029C	RPS0A	P32905	252 aa	Known RBP	4.77	□□□□□ -1.65
APL4	YPR029C	SET1	P38827	1080 aa	Known RBP	4.77	□□□□□ -1.65
APL4	YPR029C	YIL055C	P40523	627 aa	Known RBP	4.76	□□□□□ -1.65
APL4	YPR029C	PRY3	P47033	881 aa		4.76	□□□□□ -1.65
APL4	YPR029C	NNF1	P47149	201 aa		4.76	□□□□□ -1.65
APL4	YPR029C	ISW2	Q08773	1120 aa		4.76	□□□□□ -1.65
APL4	YPR029C	RPT2	P40327	437 aa	Known RBP	4.75	□□□□□ -1.65
APL4	YPR029C	ALD4	P46367	519 aa	Known RBP	4.75	□□□□□ -1.65
APL4	YPR029C	RLP24	Q07915	199 aa	Known RBP	4.75	□□□□□ -1.65
APL4	YPR029C	PBS2	P08018	668 aa		4.75	□□□□□ -1.65
APL4	YPR029C	CDC3	P32457	520 aa	Known RBP	4.75	□□□□□ -1.65
APL4	YPR029C	RPL34A	P87262	121 aa	Predicted RBP	4.75	□□□□□ -1.65
APL4	YPR029C	ITT1	Q04638	464 aa		4.75	□□□□□ -1.65
APL4	YPR029C	KEX1	P09620	729 aa		4.74	□□□□□ -1.65
APL4	YPR029C	OXP1	P28273	1286 aa		4.74	□□□□□ -1.65
APL4	YPR029C	RRP14	P36080	434 aa	Known RBP	4.73	□□□□□ -1.65
APL4	YPR029C	BRE1	Q07457	700 aa	Known RBP	4.73	□□□□□ -1.65
APL4	YPR029C	REB1	P21538	810 aa		4.73	□□□□□ -1.65
APL4	YPR029C	SPT21	P35209	758 aa		4.73	□□□□□ -1.65
APL4	YPR029C	SEN54	Q02825	467 aa	Predicted RBP	4.73	□□□□□ -1.65
APL4	YPR029C	CAB3	P36076	571 aa		4.72	□□□□□ -1.65
APL4	YPR029C	NOP2	P40991	618 aa	Known RBP	4.72	□□□□□ -1.65
APL4	YPR029C	TFB3	Q03290	321 aa		4.72	□□□□□ -1.65
APL4	YPR029C	MAK21	Q12176	1025 aa	Known RBP	4.72	□□□□□ -1.65
APL4	YPR029C	FPR3	P38911	411 aa	Known RBP	4.71	□□□□□ -1.65
APL4	YPR029C	RAD2	P07276	1031 aa		4.71	□□□□□ -1.66
APL4	YPR029C	GAL11	P19659	1081 aa		4.71	□□□□□ -1.66
APL4	YPR029C	CST6	P40535	587 aa		4.71	□□□□□ -1.66
APL4	YPR029C	ISW1	P38144	1129 aa		4.7	□□□□□ -1.66
APL4	YPR029C	AIM21	P40563	679 aa		4.7	□□□□□ -1.66
APL4	YPR029C	MPP10	P47083	593 aa	Known RBP	4.7	□□□□□ -1.66
APL4	YPR029C	TPM2	P40414	161 aa		4.7	□□□□□ -1.66
APL4	YPR029C	RNH70	P53331	553 aa		4.69	□□□□□ -1.66
APL4	YPR029C	GIR2	Q03768	265 aa	Predicted RBP	4.69	□□□□□ -1.66
APL4	YPR029C	MFT1	P33441	392 aa	Known RBP	4.69	□□□□□ -1.66
APL4	YPR029C	TSR4	P25040	408 aa		4.68	□□□□□ -1.66
APL4	YPR029C	TMA64	Q04600	565 aa	Known RBP	4.68	□□□□□ -1.66
APL4	YPR029C	PMC1	P38929	1173 aa	Predicted RBP	4.68	□□□□□ -1.66
APL4	YPR029C	TFG1	P41895	735 aa	Predicted RBP	4.68	□□□□□ -1.66
APL4	YPR029C	NOC2	P39744	710 aa	Known RBP	4.67	□□□□□ -1.66
APL4	YPR029C	BIM1	P40013	344 aa		4.67	□□□□□ -1.66
APL4	YPR029C	YDL121C	Q07541	149 aa		4.67	□□□□□ -1.66
APL4	YPR029C	PPG1	P32838	368 aa		4.67	□□□□□ -1.66
APL4	YPR029C	ERP2	P39704	215 aa		4.67	□□□□□ -1.66
APL4	YPR029C	ATF2	P53296	535 aa		4.67	□□□□□ -1.66
APL4	YPR029C	SVF1	Q05515	481 aa		4.67	□□□□□ -1.66
APL4	YPR029C	CST9	Q06032	482 aa		4.67	□□□□□ -1.66
APL4	YPR029C	MAK16	P10962	306 aa	Predicted RBP	4.66	□□□□□ -1.66
APL4	YPR029C	SPT16	P32558	1035 aa	Known RBP	4.66	□□□□□ -1.66
APL4	YPR029C	BOI2	P39969	1040 aa		4.66	□□□□□ -1.66
APL4	YPR029C	NHA1	Q99271	985 aa		4.66	□□□□□ -1.66
APL4	YPR029C	SSB1	P11484	613 aa	Known RBP	4.66	□□□□□ -1.66
APL4	YPR029C	VMA4	P22203	233 aa	Known RBP	4.66	□□□□□ -1.66
APL4	YPR029C	SSB2	P40150	613 aa	Known RBP	4.66	□□□□□ -1.66
APL4	YPR029C	IES2	P40154	320 aa		4.66	□□□□□ -1.66
APL4	YPR029C	VPS27	P40343	622 aa	Known RBP	4.66	□□□□□ -1.66
APL4	YPR029C	RPL34B	P40525	121 aa	Known RBP	4.66	□□□□□ -1.66
APL4	YPR029C	PSH1	Q12161	406 aa		4.66	□□□□□ -1.66
APL4	YPR029C	DIT2	P21595	489 aa		4.65	□□□□□ -1.67
APL4	YPR029C	MPE1	P35728	441 aa	Known RBP	4.65	□□□□□ -1.67
APL4	YPR029C	YJL007C	P47080	104 aa		4.65	□□□□□ -1.67
APL4	YPR029C	HAT1	Q12341	374 aa		4.65	□□□□□ -1.67
APL4	YPR029C	YOL098C	Q12496	1037 aa		4.65	□□□□□ -1.67
APL4	YPR029C	RPA135	P22138	1203 aa	Known RBP	4.64	□□□□□ -1.67
APL4	YPR029C	DEF1	P35732	738 aa	Known RBP	4.64	□□□□□ -1.67
APL4	YPR029C	RPG1	P38249	964 aa	Known RBP	4.64	□□□□□ -1.67
APL4	YPR029C	STM1	P39015	273 aa	Known RBP	4.64	□□□□□ -1.67
APL4	YPR029C	HOS4	P40480	1083 aa		4.64	□□□□□ -1.67
APL4	YPR029C	SEC20	P28791	383 aa		4.64	□□□□□ -1.67
APL4	YPR029C	RAM2	P29703	316 aa		4.64	□□□□□ -1.67
APL4	YPR029C	IES1	P43579	692 aa		4.64	□□□□□ -1.67
APL4	YPR029C	PKC1	P24583	1151 aa		4.63	□□□□□ -1.67
APL4	YPR029C	CPS1	P27614	576 aa		4.63	□□□□□ -1.67
APL4	YPR029C	POL5	P39985	1022 aa	Known RBP	4.63	□□□□□ -1.67
APL4	YPR029C	ATG32	P40458	529 aa		4.63	□□□□□ -1.67
APL4	YPR029C	NUP42	P49686	430 aa	Known RBP	4.63	□□□□□ -1.67
APL4	YPR029C	YOL057W	Q08225	711 aa		4.63	□□□□□ -1.67
APL4	YPR029C	SSA2	P10592	639 aa	Known RBP	4.63	□□□□□ -1.67
APL4	YPR029C	GLN1	P32288	370 aa	Known RBP	4.63	□□□□□ -1.67
APL4	YPR029C	RSM7	P47150	247 aa		4.63	□□□□□ -1.67
APL4	YPR029C	ESF2	P53743	316 aa	Known RBP	4.63	□□□□□ -1.67
APL4	YPR029C	ECM16	Q04217	1267 aa	Known RBP	4.63	□□□□□ -1.67
APL4	YPR029C	NOP53	Q12080	455 aa	Known RBP	4.63	□□□□□ -1.67
APL4	YPR029C	KAR1	P11927	433 aa		4.62	□□□□□ -1.67
APL4	YPR029C	CEF1	Q03654	590 aa	Predicted RBP	4.62	□□□□□ -1.67
APL4	YPR029C	BLI1	P35727	113 aa		4.62	□□□□□ -1.67
APL4	YPR029C	YMR196W	Q04336	1088 aa		4.62	□□□□□ -1.67
APL4	YPR029C	ALD2	P47771	506 aa		4.61	□□□□□ -1.67
APL4	YPR029C	YGL081W	P53156	320 aa		4.61	□□□□□ -1.67
APL4	YPR029C	NOB1	Q08444	459 aa	Known RBP	4.61	□□□□□ -1.67
APL4	YPR029C	TTI1	P36097	1038 aa		4.6	□□□□□ -1.67
APL4	YPR029C	MEH1	Q02205	184 aa		4.6	□□□□□ -1.67
APL4	YPR029C	POB3	Q04636	552 aa	Known RBP	4.6	□□□□□ -1.67
APL4	YPR029C	NKP1	Q12493	238 aa		4.6	□□□□□ -1.67
APL4	YPR029C	TAF13	P11747	167 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms