RNA–Protein interactions for RNA: YPL135W

ISU1, Transcript of Conserved protein of the mitochondrial matrix, yeast

Gene ISU1, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ISU1	YPL135W	ATH1	P48016	1211 aa		5.02	□□□□□ -1.61
ISU1	YPL135W	GRE2	Q12068	342 aa	Known RBP	5.02	□□□□□ -1.61
ISU1	YPL135W	LDB19	Q12502	818 aa		5.02	□□□□□ -1.61
ISU1	YPL135W	IES2	P40154	320 aa		5.01	□□□□□ -1.61
ISU1	YPL135W	IOC2	Q12072	812 aa		5.01	□□□□□ -1.61
ISU1	YPL135W	MAM3	Q12296	706 aa		5.01	□□□□□ -1.61
ISU1	YPL135W	VHR2	P40041	505 aa		5	□□□□□ -1.61
ISU1	YPL135W	ULI1	P43604	169 aa		5	□□□□□ -1.61
ISU1	YPL135W	GYP5	Q12344	894 aa		4.99	□□□□□ -1.61
ISU1	YPL135W	DIT2	P21595	489 aa		4.98	□□□□□ -1.61
ISU1	YPL135W	GUT1	P32190	709 aa		4.98	□□□□□ -1.61
ISU1	YPL135W	DMA2	P53924	522 aa		4.98	□□□□□ -1.61
ISU1	YPL135W	SAM3	Q08986	587 aa		4.98	□□□□□ -1.61
ISU1	YPL135W	GLC3	P32775	704 aa		4.97	□□□□□ -1.61
ISU1	YPL135W	DCW1	P36091	449 aa		4.97	□□□□□ -1.61
ISU1	YPL135W	SET4	P42948	560 aa		4.97	□□□□□ -1.61
ISU1	YPL135W	COX6	P00427	148 aa		4.96	□□□□□ -1.62
ISU1	YPL135W	UBP14	P38237	781 aa	Known RBP	4.96	□□□□□ -1.62
ISU1	YPL135W	NUP42	P49686	430 aa	Known RBP	4.96	□□□□□ -1.62
ISU1	YPL135W	YNR021W	P53723	404 aa	Known RBP	4.96	□□□□□ -1.62
ISU1	YPL135W	SOL3	P38858	249 aa		4.95	□□□□□ -1.62
ISU1	YPL135W	YGR273C	P53329	174 aa		4.95	□□□□□ -1.62
ISU1	YPL135W	YDR090C	Q03193	310 aa		4.95	□□□□□ -1.62
ISU1	YPL135W	YLR326W	Q06170	240 aa	Known RBP	4.95	□□□□□ -1.62
ISU1	YPL135W	YOL036W	Q08206	761 aa		4.95	□□□□□ -1.62
ISU1	YPL135W	MSB4	Q12317	492 aa		4.95	□□□□□ -1.62
ISU1	YPL135W	KIN1	P13185	1064 aa		4.94	□□□□□ -1.62
ISU1	YPL135W	MAK21	Q12176	1025 aa	Known RBP	4.94	□□□□□ -1.62
ISU1	YPL135W	EAP1	P36041	632 aa	Known RBP	4.93	□□□□□ -1.62
ISU1	YPL135W	KEX1	P09620	729 aa		4.91	□□□□□ -1.62
ISU1	YPL135W	KIC1	P38692	1080 aa		4.91	□□□□□ -1.62
ISU1	YPL135W	HTA1	P04911	132 aa	Known RBP	4.9	□□□□□ -1.63
ISU1	YPL135W	HTA2	P04912	132 aa		4.9	□□□□□ -1.63
ISU1	YPL135W	RAD54	P32863	898 aa		4.9	□□□□□ -1.63
ISU1	YPL135W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
ISU1	YPL135W	ATF2	P53296	535 aa		4.9	□□□□□ -1.63
ISU1	YPL135W	RTG1	P32607	177 aa		4.88	□□□□□ -1.63
ISU1	YPL135W	NST1	P53935	1240 aa		4.88	□□□□□ -1.63
ISU1	YPL135W	AIM7	Q12156	149 aa		4.88	□□□□□ -1.63
ISU1	YPL135W	ABP1	P15891	592 aa	Known RBP	4.87	□□□□□ -1.63
ISU1	YPL135W	ILV3	P39522	585 aa	Known RBP	4.87	□□□□□ -1.63
ISU1	YPL135W	NCR1	Q12200	1170 aa		4.87	□□□□□ -1.63
ISU1	YPL135W	YEL023C	P39992	682 aa		4.86	□□□□□ -1.63
ISU1	YPL135W	TRP5	P00931	707 aa	Known RBP	4.85	□□□□□ -1.63
ISU1	YPL135W	SEC61	P32915	480 aa		4.85	□□□□□ -1.63
ISU1	YPL135W	YNL035C	P53962	389 aa	Known RBP	4.85	□□□□□ -1.63
ISU1	YPL135W	MPH3	P0CE00	602 aa		4.84	□□□□□ -1.63
ISU1	YPL135W	GUA1	P38625	525 aa	Known RBP	4.84	□□□□□ -1.63
ISU1	YPL135W	AI4	P03878	556 aa		4.83	□□□□□ -1.64
ISU1	YPL135W	PSE1	P32337	1089 aa	Known RBP	4.82	□□□□□ -1.64
ISU1	YPL135W	ORC6	P38826	435 aa		4.82	□□□□□ -1.64
ISU1	YPL135W	DAN4	P47179	1161 aa		4.82	□□□□□ -1.64
ISU1	YPL135W	SLI15	P38283	698 aa		4.81	□□□□□ -1.64
ISU1	YPL135W	PTC4	P38089	393 aa		4.8	□□□□□ -1.64
ISU1	YPL135W	CDC73	Q06697	393 aa		4.79	□□□□□ -1.64
ISU1	YPL135W	RGR1	P19263	1082 aa		4.78	□□□□□ -1.64
ISU1	YPL135W	BCK2	P33306	851 aa		4.78	□□□□□ -1.64
ISU1	YPL135W	TEA1	P47988	759 aa		4.78	□□□□□ -1.64
ISU1	YPL135W	MVP1	P40959	511 aa	Known RBP	4.77	□□□□□ -1.65
ISU1	YPL135W	MID1	P41821	548 aa		4.77	□□□□□ -1.65
ISU1	YPL135W	TFG1	P41895	735 aa	Predicted RBP	4.77	□□□□□ -1.65
ISU1	YPL135W	TFB3	Q03290	321 aa		4.76	□□□□□ -1.65
ISU1	YPL135W	JIP4	Q03361	876 aa		4.76	□□□□□ -1.65
ISU1	YPL135W	CSN12	P47130	423 aa		4.75	□□□□□ -1.65
ISU1	YPL135W	PML39	Q03760	334 aa		4.75	□□□□□ -1.65
ISU1	YPL135W	TYW1	Q08960	810 aa	Known RBP	4.75	□□□□□ -1.65
ISU1	YPL135W	CHL1	P22516	861 aa	Predicted RBP	4.74	□□□□□ -1.65
ISU1	YPL135W	HGH1	P48362	394 aa	Known RBP	4.74	□□□□□ -1.65
ISU1	YPL135W	YPR109W	Q06104	294 aa		4.74	□□□□□ -1.65
ISU1	YPL135W	RLF2	Q12495	606 aa		4.74	□□□□□ -1.65
ISU1	YPL135W	RPP1B	P10622	106 aa	Known RBP	4.73	□□□□□ -1.65
ISU1	YPL135W	GAP1	P19145	602 aa	Predicted RBP	4.73	□□□□□ -1.65
ISU1	YPL135W	PKC1	P24583	1151 aa		4.73	□□□□□ -1.65
ISU1	YPL135W	PEX21	P50091	288 aa		4.73	□□□□□ -1.65
ISU1	YPL135W	HPC2	Q01448	625 aa		4.73	□□□□□ -1.65
ISU1	YPL135W	CSC1	Q06538	782 aa		4.73	□□□□□ -1.65
ISU1	YPL135W	KTR1	P27810	393 aa	Known RBP	4.72	□□□□□ -1.65
ISU1	YPL135W	SAP30	P38429	201 aa		4.72	□□□□□ -1.65
ISU1	YPL135W	NIS1	P53939	407 aa		4.72	□□□□□ -1.65
ISU1	YPL135W	TUM1	Q08686	304 aa	Known RBP	4.72	□□□□□ -1.65
ISU1	YPL135W	SSA2	P10592	639 aa	Known RBP	4.71	□□□□□ -1.66
ISU1	YPL135W	BRL1	P38770	471 aa		4.71	□□□□□ -1.66
ISU1	YPL135W	YMR196W	Q04336	1088 aa		4.71	□□□□□ -1.66
ISU1	YPL135W	YDL129W	Q07555	291 aa		4.71	□□□□□ -1.66
ISU1	YPL135W	MPC54	Q08550	464 aa		4.71	□□□□□ -1.66
ISU1	YPL135W	SCJ1	P25303	377 aa		4.7	□□□□□ -1.66
ISU1	YPL135W	CLB5	P30283	435 aa		4.7	□□□□□ -1.66
ISU1	YPL135W	PRE3	P38624	215 aa		4.7	□□□□□ -1.66
ISU1	YPL135W	FPK1	P53739	893 aa		4.7	□□□□□ -1.66
ISU1	YPL135W	PEX29	Q03370	554 aa		4.7	□□□□□ -1.66
ISU1	YPL135W	DPL1	Q05567	589 aa		4.7	□□□□□ -1.66
ISU1	YPL135W	TFB4	Q12004	338 aa		4.69	□□□□□ -1.66
ISU1	YPL135W	YRR1	Q12172	810 aa		4.69	□□□□□ -1.66
ISU1	YPL135W	ESS1	P22696	170 aa		4.68	□□□□□ -1.66
ISU1	YPL135W	GLN1	P32288	370 aa	Known RBP	4.67	□□□□□ -1.66
ISU1	YPL135W	YJL007C	P47080	104 aa		4.67	□□□□□ -1.66
ISU1	YPL135W	NMA111	P53920	997 aa		4.67	□□□□□ -1.66
ISU1	YPL135W	PKH3	Q03306	898 aa	Predicted RBP	4.67	□□□□□ -1.66
ISU1	YPL135W	MMP1	Q12372	583 aa		4.67	□□□□□ -1.66
ISU1	YPL135W	HST2	P53686	357 aa		4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms