RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W UBP14P38237 781 aaKnown RBP4.62□□□□□ -1.67
BRO1YPL084W MAK21Q12176 1025 aaKnown RBP4.62□□□□□ -1.67
BRO1YPL084W WSC3Q12215 556 aa4.62□□□□□ -1.67
BRO1YPL084W YGR273CP53329 174 aa4.61□□□□□ -1.67
BRO1YPL084W DIT2P21595 489 aa4.61□□□□□ -1.67
BRO1YPL084W SOL3P38858 249 aa4.6□□□□□ -1.67
BRO1YPL084W NUP42P49686 430 aaKnown RBP4.6□□□□□ -1.67
BRO1YPL084W YNR021WP53723 404 aaKnown RBP4.6□□□□□ -1.67
BRO1YPL084W YDR090CQ03193 310 aa4.6□□□□□ -1.67
BRO1YPL084W YLR326WQ06170 240 aaKnown RBP4.6□□□□□ -1.67
BRO1YPL084W ABP1P15891 592 aaKnown RBP4.58□□□□□ -1.68
BRO1YPL084W GLC3P32775 704 aa4.58□□□□□ -1.68
BRO1YPL084W HTA1P04911 132 aaKnown RBP4.58□□□□□ -1.68
BRO1YPL084W HTA2P04912 132 aa4.58□□□□□ -1.68
BRO1YPL084W KIC1P38692 1080 aa4.58□□□□□ -1.68
BRO1YPL084W KEX1P09620 729 aa4.57□□□□□ -1.68
BRO1YPL084W MSB4Q12317 492 aa4.57□□□□□ -1.68
BRO1YPL084W DMA2P53924 522 aa4.57□□□□□ -1.68
BRO1YPL084W YBL029C-AQ3E756 94 aa4.57□□□□□ -1.68
BRO1YPL084W KIN1P13185 1064 aa4.56□□□□□ -1.68
BRO1YPL084W RAD54P32863 898 aa4.56□□□□□ -1.68
BRO1YPL084W PCS60P38137 543 aaKnown RBP RIP-Chip data4.56□□□□□ -1.68not detected
BRO1YPL084W NST1P53935 1240 aa4.56□□□□□ -1.68
BRO1YPL084W YEL023CP39992 682 aa4.54□□□□□ -1.68
BRO1YPL084W ATF2P53296 535 aa4.54□□□□□ -1.68
BRO1YPL084W VNX1P42839 908 aa4.54□□□□□ -1.68
BRO1YPL084W AIM7Q12156 149 aa4.54□□□□□ -1.68
BRO1YPL084W EAP1P36041 632 aaKnown RBP4.53□□□□□ -1.68
BRO1YPL084W TRP5P00931 707 aaKnown RBP4.52□□□□□ -1.69
BRO1YPL084W AI4P03878 556 aa4.52□□□□□ -1.69
BRO1YPL084W MPH3P0CE00 602 aa4.52□□□□□ -1.69
BRO1YPL084W UBP9P39967 754 aa4.52□□□□□ -1.69
BRO1YPL084W ILV3P39522 585 aaKnown RBP4.51□□□□□ -1.69
BRO1YPL084W PTC4P38089 393 aa4.51□□□□□ -1.69
BRO1YPL084W ULI1P43604 169 aa4.51□□□□□ -1.69
BRO1YPL084W DAN4P47179 1161 aa4.51□□□□□ -1.69
BRO1YPL084W SPP1Q03012 353 aa4.51□□□□□ -1.69
BRO1YPL084W TIF11P38912 153 aaKnown RBP4.5□□□□□ -1.69
BRO1YPL084W PSE1P32337 1089 aaKnown RBP4.49□□□□□ -1.69
BRO1YPL084W SLI15P38283 698 aa4.48□□□□□ -1.69
BRO1YPL084W GUA1P38625 525 aaKnown RBP4.48□□□□□ -1.69
BRO1YPL084W ORC6P38826 435 aa4.48□□□□□ -1.69
BRO1YPL084W JIP4Q03361 876 aa4.48□□□□□ -1.69
BRO1YPL084W IOC2Q12072 812 aa4.47□□□□□ -1.69
BRO1YPL084W BUD31P25337 157 aaPredicted RBP4.46□□□□□ -1.69
BRO1YPL084W RGR1P19263 1082 aa4.45□□□□□ -1.7
BRO1YPL084W MVP1P40959 511 aaKnown RBP4.45□□□□□ -1.7
BRO1YPL084W TEA1P47988 759 aa4.45□□□□□ -1.7
BRO1YPL084W YNL035CP53962 389 aaKnown RBP4.44□□□□□ -1.7
BRO1YPL084W CDC73Q06697 393 aa4.44□□□□□ -1.7
BRO1YPL084W LDB19Q12502 818 aa4.44□□□□□ -1.7
BRO1YPL084W RPP1BP10622 106 aaKnown RBP4.44□□□□□ -1.7
BRO1YPL084W PML39Q03760 334 aa4.44□□□□□ -1.7
BRO1YPL084W MID1P41821 548 aa4.43□□□□□ -1.7
BRO1YPL084W RTG1P32607 177 aa4.43□□□□□ -1.7
BRO1YPL084W GAP1P19145 602 aaPredicted RBP4.42□□□□□ -1.7
BRO1YPL084W HGH1P48362 394 aaKnown RBP4.42□□□□□ -1.7
BRO1YPL084W CSC1Q06538 782 aa4.42□□□□□ -1.7
BRO1YPL084W CSN12P47130 423 aa4.41□□□□□ -1.7
BRO1YPL084W PEX21P50091 288 aa4.41□□□□□ -1.7
BRO1YPL084W YPR109WQ06104 294 aa4.41□□□□□ -1.7
BRO1YPL084W SEC61P32915 480 aa4.4□□□□□ -1.7
BRO1YPL084W HPC2Q01448 625 aa4.4□□□□□ -1.7
BRO1YPL084W CLB5P30283 435 aa4.4□□□□□ -1.71
BRO1YPL084W TFB3Q03290 321 aa4.4□□□□□ -1.71
BRO1YPL084W DPL1Q05567 589 aa4.4□□□□□ -1.71
BRO1YPL084W MPC54Q08550 464 aa4.4□□□□□ -1.71
BRO1YPL084W TUM1Q08686 304 aaKnown RBP4.4□□□□□ -1.71
BRO1YPL084W TFG1P41895 735 aaPredicted RBP4.39□□□□□ -1.71
BRO1YPL084W SSA2P10592 639 aaKnown RBP4.39□□□□□ -1.71
BRO1YPL084W NIS1P53939 407 aa4.39□□□□□ -1.71
BRO1YPL084W TYW1Q08960 810 aaKnown RBP4.39□□□□□ -1.71
BRO1YPL084W TFB4Q12004 338 aa4.39□□□□□ -1.71
BRO1YPL084W NCR1Q12200 1170 aa4.39□□□□□ -1.71
BRO1YPL084W PEX29Q03370 554 aa4.38□□□□□ -1.71
BRO1YPL084W RLF2Q12495 606 aa4.38□□□□□ -1.71
BRO1YPL084W KTR1P27810 393 aaKnown RBP4.37□□□□□ -1.71
BRO1YPL084W BRL1P38770 471 aa4.37□□□□□ -1.71
BRO1YPL084W FPK1P53739 893 aa4.37□□□□□ -1.71
BRO1YPL084W NMA111P53920 997 aa4.37□□□□□ -1.71
BRO1YPL084W YMR196WQ04336 1088 aa4.37□□□□□ -1.71
BRO1YPL084W PKC1P24583 1151 aa4.36□□□□□ -1.71
BRO1YPL084W YRR1Q12172 810 aa4.36□□□□□ -1.71
BRO1YPL084W ISU2Q12056 156 aa4.36□□□□□ -1.71
BRO1YPL084W YDL129WQ07555 291 aa4.35□□□□□ -1.71
BRO1YPL084W SCJ1P25303 377 aa4.35□□□□□ -1.71
BRO1YPL084W GLN1P32288 370 aaKnown RBP4.35□□□□□ -1.71
BRO1YPL084W HST2P53686 357 aa4.34□□□□□ -1.71
BRO1YPL084W MMP1Q12372 583 aa4.34□□□□□ -1.72
BRO1YPL084W SAP30P38429 201 aa4.33□□□□□ -1.72
BRO1YPL084W ESS1P22696 170 aa4.33□□□□□ -1.72
BRO1YPL084W FKH1P40466 484 aa4.33□□□□□ -1.72
BRO1YPL084W SIT4P20604 311 aa4.32□□□□□ -1.72
BRO1YPL084W SIS1P25294 352 aaKnown RBP4.32□□□□□ -1.72
BRO1YPL084W PKH3Q03306 898 aaPredicted RBP4.32□□□□□ -1.72
BRO1YPL084W YJL007CP47080 104 aa4.31□□□□□ -1.72
BRO1YPL084W HAP5Q02516 242 aa4.31□□□□□ -1.72
BRO1YPL084W YDR344CQ05510 147 aa4.31□□□□□ -1.72
BRO1YPL084W PDR1P12383 1068 aa4.3□□□□□ -1.72
BRO1YPL084W SLY41P22215 453 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms