RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W SEC61P32915 480 aa7.19□□□□□ -1.26
UBP16YPL072W ATH1P48016 1211 aa7.19□□□□□ -1.26
UBP16YPL072W JIP4Q03361 876 aa7.19□□□□□ -1.26
UBP16YPL072W YJL171CP46992 396 aa7.17□□□□□ -1.26
UBP16YPL072W YEL023CP39992 682 aa7.17□□□□□ -1.26
UBP16YPL072W NCR1Q12200 1170 aa7.17□□□□□ -1.26
UBP16YPL072W PTC4P38089 393 aa7.16□□□□□ -1.26
UBP16YPL072W DAN4P47179 1161 aa7.16□□□□□ -1.26
UBP16YPL072W SET1P38827 1080 aaKnown RBP7.13□□□□□ -1.27
UBP16YPL072W BMT6Q12291 365 aa7.11□□□□□ -1.27
UBP16YPL072W TFG1P41895 735 aaPredicted RBP7.11□□□□□ -1.27
UBP16YPL072W NST1P53935 1240 aa7.09□□□□□ -1.27
UBP16YPL072W SOL3P38858 249 aa7.08□□□□□ -1.28
UBP16YPL072W YDL129WQ07555 291 aa7.06□□□□□ -1.28
UBP16YPL072W AI4P03878 556 aa7.03□□□□□ -1.28
UBP16YPL072W MPH3P0CE00 602 aa7.03□□□□□ -1.28
UBP16YPL072W YGR273CP53329 174 aa7.03□□□□□ -1.28
UBP16YPL072W SAP30P38429 201 aa7.02□□□□□ -1.29
UBP16YPL072W IFH1P39520 1085 aa7.02□□□□□ -1.29
UBP16YPL072W PML39Q03760 334 aa7□□□□□ -1.29
UBP16YPL072W ILV3P39522 585 aaKnown RBP6.97□□□□□ -1.29
UBP16YPL072W YPR148CQ06523 435 aa6.97□□□□□ -1.29
UBP16YPL072W DMA1P38823 416 aa6.96□□□□□ -1.29
UBP16YPL072W MID1P41821 548 aa6.93□□□□□ -1.3
UBP16YPL072W KEX1P09620 729 aa6.92□□□□□ -1.3
UBP16YPL072W CHL1P22516 861 aaPredicted RBP6.91□□□□□ -1.3
UBP16YPL072W UBP14P38237 781 aaKnown RBP6.91□□□□□ -1.3
UBP16YPL072W PRE3P38624 215 aa6.91□□□□□ -1.3
UBP16YPL072W YLR326WQ06170 240 aaKnown RBP6.9□□□□□ -1.31
UBP16YPL072W SLI15P38283 698 aa6.89□□□□□ -1.31
UBP16YPL072W VHR2P40041 505 aa6.89□□□□□ -1.31
UBP16YPL072W VPS70P47161 811 aa6.88□□□□□ -1.31
UBP16YPL072W ARH1P48360 493 aa6.88□□□□□ -1.31
UBP16YPL072W PEX29Q03370 554 aa6.87□□□□□ -1.31
UBP16YPL072W YDR344CQ05510 147 aa6.87□□□□□ -1.31
UBP16YPL072W REF2P42073 533 aaPredicted RBP6.86□□□□□ -1.31
UBP16YPL072W ELP4Q02884 456 aaKnown RBP6.86□□□□□ -1.31
UBP16YPL072W MPC54Q08550 464 aa6.85□□□□□ -1.31
UBP16YPL072W RAD54P32863 898 aa6.84□□□□□ -1.31
UBP16YPL072W PCS60P38137 543 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
UBP16YPL072W YDR090CQ03193 310 aa6.83□□□□□ -1.32
UBP16YPL072W SAS10Q12136 610 aaPredicted RBP6.83□□□□□ -1.32
UBP16YPL072W HAP5Q02516 242 aa6.81□□□□□ -1.32
UBP16YPL072W DPL1Q05567 589 aa6.81□□□□□ -1.32
UBP16YPL072W CKB1P43639 278 aa6.81□□□□□ -1.32
UBP16YPL072W RQC2Q12532 1038 aaKnown RBP6.8□□□□□ -1.32
UBP16YPL072W BCK2P33306 851 aa6.79□□□□□ -1.32
UBP16YPL072W SPT23P35210 1082 aa6.79□□□□□ -1.32
UBP16YPL072W KIC1P38692 1080 aa6.79□□□□□ -1.32
UBP16YPL072W NMA111P53920 997 aa6.79□□□□□ -1.32
UBP16YPL072W MAK21Q12176 1025 aaKnown RBP6.79□□□□□ -1.32
UBP16YPL072W BNI4P53858 892 aa6.77□□□□□ -1.33
UBP16YPL072W CDC73Q06697 393 aa6.77□□□□□ -1.33
UBP16YPL072W COX6P00427 148 aa6.76□□□□□ -1.33
UBP16YPL072W RPP1BP10622 106 aaKnown RBP6.76□□□□□ -1.33
UBP16YPL072W ISU2Q12056 156 aa6.76□□□□□ -1.33
UBP16YPL072W VRP1P37370 817 aa6.73□□□□□ -1.33
UBP16YPL072W PBS2P08018 668 aa6.72□□□□□ -1.33
UBP16YPL072W YML082WQ04533 649 aaKnown RBP6.72□□□□□ -1.33
UBP16YPL072W PTC2P39966 464 aaKnown RBP6.71□□□□□ -1.33
UBP16YPL072W GAP1P19145 602 aaPredicted RBP6.7□□□□□ -1.34
UBP16YPL072W ORC6P38826 435 aa6.68□□□□□ -1.34
UBP16YPL072W XDJ1P39102 459 aa6.68□□□□□ -1.34
UBP16YPL072W CSC1Q06538 782 aa6.68□□□□□ -1.34
UBP16YPL072W DSF2P38213 736 aa6.66□□□□□ -1.34
UBP16YPL072W TFB4Q12004 338 aa6.66□□□□□ -1.34
UBP16YPL072W RAM1P22007 431 aa6.66□□□□□ -1.34
UBP16YPL072W PEX21P50091 288 aa6.65□□□□□ -1.35
UBP16YPL072W MAM3Q12296 706 aa6.64□□□□□ -1.35
UBP16YPL072W YPR015CQ12531 247 aa6.63□□□□□ -1.35
UBP16YPL072W PDR1P12383 1068 aa6.62□□□□□ -1.35
UBP16YPL072W SPB4P25808 606 aaPredicted RBP6.61□□□□□ -1.35
UBP16YPL072W MVP1P40959 511 aaKnown RBP6.61□□□□□ -1.35
UBP16YPL072W YRR1Q12172 810 aa6.61□□□□□ -1.35
UBP16YPL072W TUM1Q08686 304 aaKnown RBP6.6□□□□□ -1.35
UBP16YPL072W RGR1P19263 1082 aa6.59□□□□□ -1.35
UBP16YPL072W PSE1P32337 1089 aaKnown RBP6.58□□□□□ -1.36
UBP16YPL072W IES2P40154 320 aa6.58□□□□□ -1.36
UBP16YPL072W NUP42P49686 430 aaKnown RBP6.55□□□□□ -1.36
UBP16YPL072W YPR109WQ06104 294 aa6.55□□□□□ -1.36
UBP16YPL072W NUD1P32336 851 aa6.54□□□□□ -1.36
UBP16YPL072W STR2P47164 639 aa6.53□□□□□ -1.36
UBP16YPL072W SAS4Q04003 481 aa6.53□□□□□ -1.36
UBP16YPL072W BUD20Q08004 166 aaPredicted RBP6.53□□□□□ -1.36
UBP16YPL072W GYP1Q08484 637 aa6.53□□□□□ -1.36
UBP16YPL072W ISM1P48526 1002 aa6.52□□□□□ -1.37
UBP16YPL072W DIT2P21595 489 aa6.5□□□□□ -1.37
UBP16YPL072W CLB5P30283 435 aa6.5□□□□□ -1.37
UBP16YPL072W NPL4P33755 580 aa6.5□□□□□ -1.37
UBP16YPL072W DPS1P04802 557 aaKnown RBP6.5□□□□□ -1.37
UBP16YPL072W PRT1P06103 763 aaKnown RBP6.5□□□□□ -1.37
UBP16YPL072W TY1A-DR4O74302 440 aa6.45□□□□□ -1.38
UBP16YPL072W TY1A-HP0C2I4 478 aaKnown RBP6.45□□□□□ -1.38
UBP16YPL072W TY1A-AP0CX57 440 aa6.45□□□□□ -1.38
UBP16YPL072W TY1A-PR1P0CX58 440 aa6.45□□□□□ -1.38
UBP16YPL072W TY1A-ORP0CX59 440 aa6.45□□□□□ -1.38
UBP16YPL072W TY1A-PR2P0CX60 440 aa6.45□□□□□ -1.38
UBP16YPL072W TY1A-DR5P0CX65 440 aa6.45□□□□□ -1.38
UBP16YPL072W TY1A-ER2P0CX66 440 aa6.45□□□□□ -1.38
UBP16YPL072W TY1A-GR3P0CX67 440 aa6.45□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms