RNA–Protein interactions for RNA: YOR291W

YPK9, Transcript of Vacuolar protein with a possible role in sequestering heavy metals, yeast

Gene YPK9, Length 4,419 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPK9	YOR291W	PDS5	Q04264	1277 aa		5.06	□□□□□ -1.6
YPK9	YOR291W	CDC45	Q08032	650 aa		5.06	□□□□□ -1.6
YPK9	YOR291W	MMS1	Q06211	1407 aa		5.06	□□□□□ -1.6
YPK9	YOR291W	COG8	Q04632	607 aa		5.05	□□□□□ -1.6
YPK9	YOR291W	MTC1	P47018	478 aa	Known RBP	5.05	□□□□□ -1.6
YPK9	YOR291W	MLP2	P40457	1679 aa		5.05	□□□□□ -1.6
YPK9	YOR291W	MYO4	P32492	1471 aa		5.05	□□□□□ -1.6
YPK9	YOR291W	VPS24	P36095	224 aa	Known RBP	5.05	□□□□□ -1.6
YPK9	YOR291W	YIR014W	P40570	242 aa		5.05	□□□□□ -1.6
YPK9	YOR291W	SLN1	P39928	1220 aa	Predicted RBP	5.04	□□□□□ -1.6
YPK9	YOR291W	DJP1	P40564	432 aa		5.04	□□□□□ -1.6
YPK9	YOR291W	NAP1	P25293	417 aa	Known RBP	5.03	□□□□□ -1.6
YPK9	YOR291W	VPS27	P40343	622 aa	Known RBP	5.03	□□□□□ -1.6
YPK9	YOR291W	YPP1	P46951	817 aa		5.03	□□□□□ -1.6
YPK9	YOR291W	TSC11	P40061	1430 aa		5.03	□□□□□ -1.6
YPK9	YOR291W	SPT21	P35209	758 aa		5.03	□□□□□ -1.6
YPK9	YOR291W	ENV11	P53246	860 aa		5.02	□□□□□ -1.61
YPK9	YOR291W	CTR9	P89105	1077 aa		5.02	□□□□□ -1.61
YPK9	YOR291W	DIP2	Q12220	943 aa	Predicted RBP	5.02	□□□□□ -1.61
YPK9	YOR291W	ARL1	P38116	183 aa	Known RBP	5.01	□□□□□ -1.61
YPK9	YOR291W	ABP1	P15891	592 aa	Known RBP	5.01	□□□□□ -1.61
YPK9	YOR291W	KRI1	P42846	591 aa	Known RBP	5.01	□□□□□ -1.61
YPK9	YOR291W	SMC3	P47037	1230 aa		5.01	□□□□□ -1.61
YPK9	YOR291W	IRC20	Q06554	1556 aa		5.01	□□□□□ -1.61
YPK9	YOR291W	CKB1	P43639	278 aa		5	□□□□□ -1.61
YPK9	YOR291W	SNQ2	P32568	1501 aa	Known RBP	5	□□□□□ -1.61
YPK9	YOR291W	DNA2	P38859	1522 aa		5	□□□□□ -1.61
YPK9	YOR291W	RAD2	P07276	1031 aa		5	□□□□□ -1.61
YPK9	YOR291W	TPM2	P40414	161 aa		5	□□□□□ -1.61
YPK9	YOR291W	NOT3	P06102	836 aa	Known RBP	5	□□□□□ -1.61
YPK9	YOR291W	YPK9	Q12697	1472 aa		4.99	□□□□□ -1.61
YPK9	YOR291W	GEA1	P47102	1408 aa	Predicted RBP	4.99	□□□□□ -1.61
YPK9	YOR291W	BUD21	Q08492	214 aa	Predicted RBP	4.99	□□□□□ -1.61
YPK9	YOR291W	ESP1	Q03018	1630 aa		4.99	□□□□□ -1.61
YPK9	YOR291W	YOR1	P53049	1477 aa		4.99	□□□□□ -1.61
YPK9	YOR291W	PCT1	P13259	424 aa		4.99	□□□□□ -1.61
YPK9	YOR291W	EDE1	P34216	1381 aa		4.99	□□□□□ -1.61
YPK9	YOR291W	SPT2	P06843	333 aa	Predicted RBP	4.98	□□□□□ -1.61
YPK9	YOR291W	SPC110	P32380	944 aa		4.98	□□□□□ -1.61
YPK9	YOR291W	NUP159	P40477	1460 aa		4.98	□□□□□ -1.61
YPK9	YOR291W	YCF1	P39109	1515 aa	Known RBP	4.98	□□□□□ -1.61
YPK9	YOR291W	YDL144C	Q07589	356 aa		4.98	□□□□□ -1.61
YPK9	YOR291W	RPP0	P05317	312 aa	Known RBP	4.97	□□□□□ -1.61
YPK9	YOR291W	MSP1	P28737	362 aa		4.97	□□□□□ -1.61
YPK9	YOR291W	NMD2	P38798	1089 aa	Known RBP	4.97	□□□□□ -1.61
YPK9	YOR291W	RAD26	P40352	1085 aa		4.97	□□□□□ -1.61
YPK9	YOR291W	RVB2	Q12464	471 aa	Known RBP	4.97	□□□□□ -1.61
YPK9	YOR291W	RKR1	Q04781	1562 aa		4.95	□□□□□ -1.62
YPK9	YOR291W	KOG1	P38873	1557 aa		4.95	□□□□□ -1.62
YPK9	YOR291W	MDG1	P53885	366 aa		4.94	□□□□□ -1.62
YPK9	YOR291W	HSP82	P02829	709 aa	Known RBP	4.94	□□□□□ -1.62
YPK9	YOR291W	SPB4	P25808	606 aa	Predicted RBP	4.94	□□□□□ -1.62
YPK9	YOR291W	MIC60	P36112	540 aa		4.94	□□□□□ -1.62
YPK9	YOR291W	TCD1	P38756	429 aa		4.93	□□□□□ -1.62
YPK9	YOR291W	KIP3	P53086	805 aa	Known RBP	4.93	□□□□□ -1.62
YPK9	YOR291W	YGL081W	P53156	320 aa		4.93	□□□□□ -1.62
YPK9	YOR291W	PDR15	Q04182	1529 aa	Known RBP	4.93	□□□□□ -1.62
YPK9	YOR291W	CLB1	P24868	471 aa		4.93	□□□□□ -1.62
YPK9	YOR291W	TAF5	P38129	798 aa		4.93	□□□□□ -1.62
YPK9	YOR291W	DSN1	P40568	576 aa		4.93	□□□□□ -1.62
YPK9	YOR291W	PSH1	Q12161	406 aa		4.93	□□□□□ -1.62
YPK9	YOR291W	ITC1	P53125	1264 aa		4.92	□□□□□ -1.62
YPK9	YOR291W	MSH4	P40965	878 aa	Predicted RBP	4.92	□□□□□ -1.62
YPK9	YOR291W	LSP1	Q12230	341 aa	Known RBP	4.92	□□□□□ -1.62
YPK9	YOR291W	RPN1	P38764	993 aa	Known RBP	4.92	□□□□□ -1.62
YPK9	YOR291W	LCD1	Q04377	747 aa		4.91	□□□□□ -1.62
YPK9	YOR291W	VPS15	P22219	1454 aa		4.91	□□□□□ -1.62
YPK9	YOR291W	DOS2	P54858	310 aa		4.91	□□□□□ -1.62
YPK9	YOR291W	KNS1	P32350	737 aa	Predicted RBP	4.91	□□□□□ -1.62
YPK9	YOR291W	CLB5	P30283	435 aa		4.9	□□□□□ -1.62
YPK9	YOR291W	DEP1	P31385	405 aa		4.9	□□□□□ -1.62
YPK9	YOR291W	GCN2	P15442	1659 aa		4.9	□□□□□ -1.62
YPK9	YOR291W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.62	not detected
YPK9	YOR291W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.62	not detected
YPK9	YOR291W	PLP2	Q12017	286 aa		4.9	□□□□□ -1.62
YPK9	YOR291W	TRM3	Q07527	1436 aa		4.9	□□□□□ -1.62
YPK9	YOR291W	SWE1	P32944	819 aa		4.9	□□□□□ -1.63
YPK9	YOR291W	PRP3	Q03338	469 aa	Predicted RBP	4.9	□□□□□ -1.63
YPK9	YOR291W	DNF1	P32660	1571 aa		4.9	□□□□□ -1.63
YPK9	YOR291W	MFT1	P33441	392 aa	Known RBP	4.9	□□□□□ -1.63
YPK9	YOR291W	VPS60	Q03390	229 aa		4.89	□□□□□ -1.63
YPK9	YOR291W	DAL5	P15365	543 aa		4.89	□□□□□ -1.63
YPK9	YOR291W	TEA1	P47988	759 aa		4.89	□□□□□ -1.63
YPK9	YOR291W	RNT1	Q02555	471 aa		4.89	□□□□□ -1.63
YPK9	YOR291W	SFI1	Q12369	946 aa		4.89	□□□□□ -1.63
YPK9	YOR291W	RSC1	P53236	928 aa		4.88	□□□□□ -1.63
YPK9	YOR291W	YNL011C	P53980	444 aa		4.88	□□□□□ -1.63
YPK9	YOR291W	MAK21	Q12176	1025 aa	Known RBP	4.88	□□□□□ -1.63
YPK9	YOR291W	ESL2	P36168	1195 aa		4.88	□□□□□ -1.63
YPK9	YOR291W	RTR1	P40084	226 aa	Predicted RBP	4.88	□□□□□ -1.63
YPK9	YOR291W	NST1	P53935	1240 aa		4.88	□□□□□ -1.63
YPK9	YOR291W	MPP10	P47083	593 aa	Known RBP	4.87	□□□□□ -1.63
YPK9	YOR291W	PIL1	P53252	339 aa	Known RBP	4.87	□□□□□ -1.63
YPK9	YOR291W	NUP157	P40064	1391 aa	Known RBP	4.87	□□□□□ -1.63
YPK9	YOR291W	HOS3	Q02959	697 aa	Known RBP	4.87	□□□□□ -1.63
YPK9	YOR291W	PUF6	Q04373	656 aa	Known RBP	4.87	□□□□□ -1.63
YPK9	YOR291W	LTV1	P34078	463 aa		4.87	□□□□□ -1.63
YPK9	YOR291W	ECM16	Q04217	1267 aa	Known RBP	4.87	□□□□□ -1.63
YPK9	YOR291W	SRS2	P12954	1174 aa		4.86	□□□□□ -1.63
YPK9	YOR291W	GEA2	P39993	1459 aa	Known RBP	4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms