RNA–Protein interactions for RNA: YOR260W

GCD1, Transcript of Gamma subunit of the translation initiation factor eIF2B, yeastyeast

Gene GCD1, Length 1,737 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GCD1YOR260W GUT1P32190 709 aa7.83□□□□□ -1.16
GCD1YOR260W JIP4Q03361 876 aa7.81□□□□□ -1.16
GCD1YOR260W SET1P38827 1080 aaKnown RBP7.81□□□□□ -1.16
GCD1YOR260W YEL023CP39992 682 aa7.81□□□□□ -1.16
GCD1YOR260W SEC61P32915 480 aa7.8□□□□□ -1.16
GCD1YOR260W DAN4P47179 1161 aa7.79□□□□□ -1.16
GCD1YOR260W PTC4P38089 393 aa7.78□□□□□ -1.16
GCD1YOR260W YJL171CP46992 396 aa7.77□□□□□ -1.17
GCD1YOR260W NCR1Q12200 1170 aa7.77□□□□□ -1.17
GCD1YOR260W DMA1P38823 416 aa7.76□□□□□ -1.17
GCD1YOR260W NST1P53935 1240 aa7.74□□□□□ -1.17
GCD1YOR260W SOL3P38858 249 aa7.72□□□□□ -1.17
GCD1YOR260W BMT6Q12291 365 aa7.72□□□□□ -1.17
GCD1YOR260W TFG1P41895 735 aaPredicted RBP7.71□□□□□ -1.18
GCD1YOR260W YGR273CP53329 174 aa7.68□□□□□ -1.18
GCD1YOR260W AI4P03878 556 aa7.66□□□□□ -1.18
GCD1YOR260W IFH1P39520 1085 aa7.66□□□□□ -1.18
GCD1YOR260W YDL129WQ07555 291 aa7.66□□□□□ -1.18
GCD1YOR260W MPH3P0CE00 602 aa7.65□□□□□ -1.18
GCD1YOR260W SAP30P38429 201 aa7.64□□□□□ -1.19
GCD1YOR260W YPR148CQ06523 435 aa7.64□□□□□ -1.19
GCD1YOR260W RQC2Q12532 1038 aaKnown RBP7.64□□□□□ -1.19
GCD1YOR260W ILV3P39522 585 aaKnown RBP7.63□□□□□ -1.19
GCD1YOR260W PML39Q03760 334 aa7.63□□□□□ -1.19
GCD1YOR260W KEX1P09620 729 aa7.56□□□□□ -1.2
GCD1YOR260W MID1P41821 548 aa7.56□□□□□ -1.2
GCD1YOR260W YLR326WQ06170 240 aaKnown RBP7.55□□□□□ -1.2
GCD1YOR260W UBP14P38237 781 aaKnown RBP7.55□□□□□ -1.2
GCD1YOR260W VHR2P40041 505 aa7.54□□□□□ -1.2
GCD1YOR260W VPS70P47161 811 aa7.54□□□□□ -1.2
GCD1YOR260W SLI15P38283 698 aa7.52□□□□□ -1.21
GCD1YOR260W PRE3P38624 215 aa7.51□□□□□ -1.21
GCD1YOR260W YDR344CQ05510 147 aa7.51□□□□□ -1.21
GCD1YOR260W CHL1P22516 861 aaPredicted RBP7.5□□□□□ -1.21
GCD1YOR260W SAS10Q12136 610 aaPredicted RBP7.5□□□□□ -1.21
GCD1YOR260W REF2P42073 533 aaPredicted RBP7.49□□□□□ -1.21
GCD1YOR260W PEX29Q03370 554 aa7.49□□□□□ -1.21
GCD1YOR260W ARH1P48360 493 aa7.48□□□□□ -1.21
GCD1YOR260W RAD54P32863 898 aa7.47□□□□□ -1.21
GCD1YOR260W PCS60P38137 543 aaKnown RBP RIP-Chip data7.47□□□□□ -1.21not detected
GCD1YOR260W MPC54Q08550 464 aa7.47□□□□□ -1.21
GCD1YOR260W YDR090CQ03193 310 aa7.47□□□□□ -1.21
GCD1YOR260W ELP4Q02884 456 aaKnown RBP7.45□□□□□ -1.22
GCD1YOR260W CKB1P43639 278 aa7.44□□□□□ -1.22
GCD1YOR260W DPL1Q05567 589 aa7.43□□□□□ -1.22
GCD1YOR260W HAP5Q02516 242 aa7.42□□□□□ -1.22
GCD1YOR260W KIC1P38692 1080 aa7.41□□□□□ -1.22
GCD1YOR260W MAK21Q12176 1025 aaKnown RBP7.41□□□□□ -1.22
GCD1YOR260W CDC73Q06697 393 aa7.4□□□□□ -1.23
GCD1YOR260W NMA111P53920 997 aa7.39□□□□□ -1.23
GCD1YOR260W COX6P00427 148 aa7.38□□□□□ -1.23
GCD1YOR260W SPT23P35210 1082 aa7.38□□□□□ -1.23
GCD1YOR260W BNI4P53858 892 aa7.38□□□□□ -1.23
GCD1YOR260W BCK2P33306 851 aa7.36□□□□□ -1.23
GCD1YOR260W PBS2P08018 668 aa7.35□□□□□ -1.23
GCD1YOR260W RPP1BP10622 106 aaKnown RBP7.35□□□□□ -1.23
GCD1YOR260W ISU2Q12056 156 aa7.35□□□□□ -1.23
GCD1YOR260W ORC6P38826 435 aa7.32□□□□□ -1.24
GCD1YOR260W GAP1P19145 602 aaPredicted RBP7.31□□□□□ -1.24
GCD1YOR260W PTC2P39966 464 aaKnown RBP7.31□□□□□ -1.24
GCD1YOR260W VRP1P37370 817 aa7.3□□□□□ -1.24
GCD1YOR260W DSF2P38213 736 aa7.3□□□□□ -1.24
GCD1YOR260W YML082WQ04533 649 aaKnown RBP7.3□□□□□ -1.24
GCD1YOR260W CSC1Q06538 782 aa7.28□□□□□ -1.24
GCD1YOR260W MAM3Q12296 706 aa7.27□□□□□ -1.25
GCD1YOR260W RAM1P22007 431 aa7.26□□□□□ -1.25
GCD1YOR260W TFB4Q12004 338 aa7.26□□□□□ -1.25
GCD1YOR260W SPB4P25808 606 aaPredicted RBP7.24□□□□□ -1.25
GCD1YOR260W PEX21P50091 288 aa7.24□□□□□ -1.25
GCD1YOR260W PDR1P12383 1068 aa7.24□□□□□ -1.25
GCD1YOR260W XDJ1P39102 459 aa7.24□□□□□ -1.25
GCD1YOR260W YPR015CQ12531 247 aa7.24□□□□□ -1.25
GCD1YOR260W IES2P40154 320 aa7.22□□□□□ -1.25
GCD1YOR260W YRR1Q12172 810 aa7.22□□□□□ -1.25
GCD1YOR260W MVP1P40959 511 aaKnown RBP7.21□□□□□ -1.25
GCD1YOR260W TUM1Q08686 304 aaKnown RBP7.21□□□□□ -1.25
GCD1YOR260W RGR1P19263 1082 aa7.2□□□□□ -1.26
GCD1YOR260W PSE1P32337 1089 aaKnown RBP7.18□□□□□ -1.26
GCD1YOR260W NUP42P49686 430 aaKnown RBP7.18□□□□□ -1.26
GCD1YOR260W NUD1P32336 851 aa7.15□□□□□ -1.27
GCD1YOR260W YPR109WQ06104 294 aa7.15□□□□□ -1.27
GCD1YOR260W STR2P47164 639 aa7.13□□□□□ -1.27
GCD1YOR260W DIT2P21595 489 aa7.12□□□□□ -1.27
GCD1YOR260W ISM1P48526 1002 aa7.11□□□□□ -1.27
GCD1YOR260W BUD20Q08004 166 aaPredicted RBP7.11□□□□□ -1.27
GCD1YOR260W GYP1Q08484 637 aa7.11□□□□□ -1.27
GCD1YOR260W CLB5P30283 435 aa7.1□□□□□ -1.27
GCD1YOR260W SAS4Q04003 481 aa7.09□□□□□ -1.27
GCD1YOR260W NPL4P33755 580 aa7.08□□□□□ -1.28
GCD1YOR260W DPS1P04802 557 aaKnown RBP7.07□□□□□ -1.28
GCD1YOR260W PRT1P06103 763 aaKnown RBP7.07□□□□□ -1.28
GCD1YOR260W TY1A-DR4O74302 440 aa7.05□□□□□ -1.28
GCD1YOR260W TY1A-HP0C2I4 478 aaKnown RBP7.05□□□□□ -1.28
GCD1YOR260W TY1A-AP0CX57 440 aa7.05□□□□□ -1.28
GCD1YOR260W TY1A-PR1P0CX58 440 aa7.05□□□□□ -1.28
GCD1YOR260W TY1A-ORP0CX59 440 aa7.05□□□□□ -1.28
GCD1YOR260W TY1A-PR2P0CX60 440 aa7.05□□□□□ -1.28
GCD1YOR260W TY1A-DR5P0CX65 440 aa7.05□□□□□ -1.28
GCD1YOR260W TY1A-ER2P0CX66 440 aa7.05□□□□□ -1.28
GCD1YOR260W TY1A-GR3P0CX67 440 aa7.05□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 101.8 ms