RNA–Protein interactions for RNA: YOR260W

GCD1, Transcript of Gamma subunit of the translation initiation factor eIF2B, yeastyeast

Gene GCD1, Length 1,737 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GCD1YOR260W MTC1P47018 478 aaKnown RBP13.19□□□□□ -0.3
GCD1YOR260W DRS1P32892 752 aaKnown RBP12.63□□□□□ -0.39
GCD1YOR260W FAP1P53971 965 aa11.48□□□□□ -0.57
GCD1YOR260W DIP2Q12220 943 aaPredicted RBP10.95□□□□□ -0.66
GCD1YOR260W PRI1P10363 409 aa10.93□□□□□ -0.66
GCD1YOR260W ISW2Q08773 1120 aa10.86□□□□□ -0.67
GCD1YOR260W AAD16Q02895 342 aa10.81□□□□□ -0.68
GCD1YOR260W PRY3P47033 881 aa10.76□□□□□ -0.69
GCD1YOR260W RPG1P38249 964 aaKnown RBP10.72□□□□□ -0.69
GCD1YOR260W AVT3P36062 692 aa10.67□□□□□ -0.7
GCD1YOR260W BFR2Q06631 534 aaKnown RBP10.66□□□□□ -0.7
GCD1YOR260W RSE1Q04693 1361 aaKnown RBP10.5□□□□□ -0.73
GCD1YOR260W TSR3Q12094 313 aaKnown RBP10.33□□□□□ -0.76
GCD1YOR260W YCK3P39962 524 aa10.2□□□□□ -0.78
GCD1YOR260W RPL17AP05740 184 aaKnown RBP10.14□□□□□ -0.79
GCD1YOR260W RPL17BP46990 184 aaKnown RBP10.14□□□□□ -0.79
GCD1YOR260W HAA1Q12753 694 aaKnown RBP10.13□□□□□ -0.79
GCD1YOR260W REB1P21538 810 aa10.07□□□□□ -0.8
GCD1YOR260W MRPL32P25348 183 aa9.93□□□□□ -0.82
GCD1YOR260W SPT21P35209 758 aa9.76□□□□□ -0.85
GCD1YOR260W TFA1P36100 482 aa9.63□□□□□ -0.87
GCD1YOR260W YKR023WP36119 530 aaKnown RBP9.56□□□□□ -0.88
GCD1YOR260W CDC27P38042 758 aa9.51□□□□□ -0.89
GCD1YOR260W RIM101P33400 625 aa9.48□□□□□ -0.89
GCD1YOR260W YGL015CP33199 130 aa9.43□□□□□ -0.9
GCD1YOR260W TFC8Q12308 588 aa9.37□□□□□ -0.91
GCD1YOR260W HOP09932 586 aa9.35□□□□□ -0.91
GCD1YOR260W DCD1P06773 312 aa9.31□□□□□ -0.92
GCD1YOR260W UBP10P53874 792 aaPredicted RBP9.22□□□□□ -0.93
GCD1YOR260W OXP1P28273 1286 aa9.17□□□□□ -0.94
GCD1YOR260W MAP2P38174 421 aaKnown RBP9.17□□□□□ -0.94
GCD1YOR260W BCH2P36122 765 aa9.07□□□□□ -0.96
GCD1YOR260W SCY1P53009 804 aa9.04□□□□□ -0.96
GCD1YOR260W YIL055CP40523 627 aaKnown RBP9.02□□□□□ -0.97
GCD1YOR260W PTP3P40048 928 aa9□□□□□ -0.97
GCD1YOR260W YAH1Q12184 172 aaKnown RBP8.92□□□□□ -0.98
GCD1YOR260W SLX5P32828 619 aaKnown RBP8.91□□□□□ -0.98
GCD1YOR260W RSM7P47150 247 aa8.88□□□□□ -0.99
GCD1YOR260W EPS1P40557 701 aa8.87□□□□□ -0.99
GCD1YOR260W BDF1P35817 686 aa8.83□□□□□ -1
GCD1YOR260W TIF4632P39936 914 aaKnown RBP8.82□□□□□ -1
GCD1YOR260W YLR271WQ06152 274 aa8.81□□□□□ -1
GCD1YOR260W AI2P03876 854 aa8.78□□□□□ -1
GCD1YOR260W SSP1P38871 571 aa8.78□□□□□ -1
GCD1YOR260W BBC1P47068 1157 aa8.77□□□□□ -1
GCD1YOR260W TGL3P40308 642 aa8.77□□□□□ -1.01
GCD1YOR260W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.69□□□□□ -1.02not detected
GCD1YOR260W PSD2P53037 1138 aaKnown RBP8.66□□□□□ -1.02
GCD1YOR260W MGA2P40578 1113 aa8.54□□□□□ -1.04
GCD1YOR260W NSR1P27476 414 aaKnown RBP RIP-Chip data8.52□□□□□ -1.05not detected
GCD1YOR260W CST9Q06032 482 aa8.52□□□□□ -1.05
GCD1YOR260W BUD31P25337 157 aaPredicted RBP8.51□□□□□ -1.05
GCD1YOR260W MRM1P25270 412 aa8.49□□□□□ -1.05
GCD1YOR260W MST1P07236 462 aa8.46□□□□□ -1.06
GCD1YOR260W YAP5P40574 245 aa8.43□□□□□ -1.06
GCD1YOR260W YOR238WQ08634 303 aa8.43□□□□□ -1.06
GCD1YOR260W UBP9P39967 754 aa8.4□□□□□ -1.07
GCD1YOR260W RTG3P38165 486 aa8.34□□□□□ -1.07
GCD1YOR260W VPS29P38759 282 aa8.29□□□□□ -1.08
GCD1YOR260W RCR1P38212 213 aa8.29□□□□□ -1.08
GCD1YOR260W YMR1P47147 688 aaKnown RBP RIP-Chip data8.27□□□□□ -1.09not detected
GCD1YOR260W PIB1Q06651 286 aa8.26□□□□□ -1.09
GCD1YOR260W YBL029C-AQ3E756 94 aa8.26□□□□□ -1.09
GCD1YOR260W GTT3P39996 337 aa8.23□□□□□ -1.09
GCD1YOR260W DBP1P24784 617 aaKnown RBP8.22□□□□□ -1.09
GCD1YOR260W STS1P38637 319 aa8.21□□□□□ -1.09
GCD1YOR260W VNX1P42839 908 aa8.19□□□□□ -1.1
GCD1YOR260W YFR006WP43590 535 aa8.18□□□□□ -1.1
GCD1YOR260W WSC3Q12215 556 aa8.17□□□□□ -1.1
GCD1YOR260W RAM2P29703 316 aa8.12□□□□□ -1.11
GCD1YOR260W VMA1P17255 1071 aaKnown RBP8.12□□□□□ -1.11
GCD1YOR260W SIS1P25294 352 aaKnown RBP8.12□□□□□ -1.11
GCD1YOR260W SPP1Q03012 353 aa8.11□□□□□ -1.11
GCD1YOR260W MAK11P20484 414 aaKnown RBP8.07□□□□□ -1.12
GCD1YOR260W TIF11P38912 153 aaKnown RBP8.06□□□□□ -1.12
GCD1YOR260W MSB4Q12317 492 aa8.06□□□□□ -1.12
GCD1YOR260W YOL036WQ08206 761 aa8.06□□□□□ -1.12
GCD1YOR260W SAM3Q08986 587 aa8.06□□□□□ -1.12
GCD1YOR260W SET4P42948 560 aa8.03□□□□□ -1.12
GCD1YOR260W ULI1P43604 169 aa8□□□□□ -1.13
GCD1YOR260W EAP1P36041 632 aaKnown RBP7.99□□□□□ -1.13
GCD1YOR260W IOC2Q12072 812 aa7.97□□□□□ -1.13
GCD1YOR260W MIF2P35201 549 aa7.96□□□□□ -1.14
GCD1YOR260W COQ8P27697 501 aa7.95□□□□□ -1.14
GCD1YOR260W EDS1P38073 919 aa7.95□□□□□ -1.14
GCD1YOR260W GYP5Q12344 894 aa7.95□□□□□ -1.14
GCD1YOR260W LDB19Q12502 818 aa7.95□□□□□ -1.14
GCD1YOR260W ABP1P15891 592 aaKnown RBP7.94□□□□□ -1.14
GCD1YOR260W TRP5P00931 707 aaKnown RBP7.93□□□□□ -1.14
GCD1YOR260W FKH1P40466 484 aa7.92□□□□□ -1.14
GCD1YOR260W PTC3P34221 468 aaKnown RBP7.9□□□□□ -1.14
GCD1YOR260W GRE2Q12068 342 aaKnown RBP7.89□□□□□ -1.15
GCD1YOR260W AIR2Q12476 344 aaKnown RBP7.88□□□□□ -1.15
GCD1YOR260W HTA1P04911 132 aaKnown RBP7.86□□□□□ -1.15
GCD1YOR260W HTA2P04912 132 aa7.86□□□□□ -1.15
GCD1YOR260W DCW1P36091 449 aa7.86□□□□□ -1.15
GCD1YOR260W NOP53Q12080 455 aaKnown RBP7.85□□□□□ -1.15
GCD1YOR260W RTG1P32607 177 aa7.84□□□□□ -1.15
GCD1YOR260W ATH1P48016 1211 aa7.84□□□□□ -1.15
GCD1YOR260W YNL035CP53962 389 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 41 ms