RNA–Protein interactions for RNA: YOR032C

HMS1, Transcript of bHLH protein with similarity to myc-family transcription factors, yeastyeast

Gene HMS1, Length 1,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMS1YOR032C PTC3P34221 468 aaKnown RBP8.96□□□□□ -0.98
HMS1YOR032C NCR1Q12200 1170 aa8.96□□□□□ -0.98
HMS1YOR032C SEC61P32915 480 aa8.94□□□□□ -0.98
HMS1YOR032C BMT6Q12291 365 aa8.94□□□□□ -0.98
HMS1YOR032C DAN4P47179 1161 aa8.93□□□□□ -0.98
HMS1YOR032C YEL023CP39992 682 aa8.92□□□□□ -0.98
HMS1YOR032C JIP4Q03361 876 aa8.92□□□□□ -0.98
HMS1YOR032C ATH1P48016 1211 aa8.91□□□□□ -0.98
HMS1YOR032C GUT1P32190 709 aa8.88□□□□□ -0.99
HMS1YOR032C PTC4P38089 393 aa8.87□□□□□ -0.99
HMS1YOR032C TFG1P41895 735 aaPredicted RBP8.85□□□□□ -0.99
HMS1YOR032C SAP30P38429 201 aa8.8□□□□□ -1
HMS1YOR032C SOL3P38858 249 aa8.8□□□□□ -1
HMS1YOR032C NST1P53935 1240 aa8.8□□□□□ -1
HMS1YOR032C YDL129WQ07555 291 aa8.8□□□□□ -1
HMS1YOR032C NOP53Q12080 455 aaKnown RBP8.78□□□□□ -1
HMS1YOR032C SET1P38827 1080 aaKnown RBP8.75□□□□□ -1.01
HMS1YOR032C PML39Q03760 334 aa8.74□□□□□ -1.01
HMS1YOR032C ILV3P39522 585 aaKnown RBP8.71□□□□□ -1.02
HMS1YOR032C MPH3P0CE00 602 aa8.7□□□□□ -1.02
HMS1YOR032C YGR273CP53329 174 aa8.7□□□□□ -1.02
HMS1YOR032C AI4P03878 556 aa8.69□□□□□ -1.02
HMS1YOR032C YDR344CQ05510 147 aa8.68□□□□□ -1.02
HMS1YOR032C MID1P41821 548 aa8.67□□□□□ -1.02
HMS1YOR032C PRE3P38624 215 aa8.63□□□□□ -1.03
HMS1YOR032C CHL1P22516 861 aaPredicted RBP8.62□□□□□ -1.03
HMS1YOR032C SAS10Q12136 610 aaPredicted RBP8.58□□□□□ -1.04
HMS1YOR032C ELP4Q02884 456 aaKnown RBP8.57□□□□□ -1.04
HMS1YOR032C PEX29Q03370 554 aa8.57□□□□□ -1.04
HMS1YOR032C KEX1P09620 729 aa8.55□□□□□ -1.04
HMS1YOR032C SLI15P38283 698 aa8.54□□□□□ -1.04
HMS1YOR032C LEO1P38439 464 aa8.54□□□□□ -1.04
HMS1YOR032C VHR2P40041 505 aa8.54□□□□□ -1.04
HMS1YOR032C ARH1P48360 493 aa8.54□□□□□ -1.04
HMS1YOR032C YLR326WQ06170 240 aaKnown RBP8.53□□□□□ -1.04
HMS1YOR032C BCK2P33306 851 aa8.52□□□□□ -1.05
HMS1YOR032C UBP14P38237 781 aaKnown RBP8.52□□□□□ -1.05
HMS1YOR032C MPC54Q08550 464 aa8.52□□□□□ -1.05
HMS1YOR032C IFH1P39520 1085 aa8.5□□□□□ -1.05
HMS1YOR032C YPR148CQ06523 435 aa8.49□□□□□ -1.05
HMS1YOR032C HAP5Q02516 242 aa8.47□□□□□ -1.05
HMS1YOR032C PCS60P38137 543 aaKnown RBP RIP-Chip data8.45□□□□□ -1.06not detected
HMS1YOR032C DPL1Q05567 589 aa8.45□□□□□ -1.06
HMS1YOR032C SPT23P35210 1082 aa8.44□□□□□ -1.06
HMS1YOR032C VRP1P37370 817 aa8.44□□□□□ -1.06
HMS1YOR032C LEU3P08638 886 aa8.43□□□□□ -1.06
HMS1YOR032C RAD54P32863 898 aa8.43□□□□□ -1.06
HMS1YOR032C VPS70P47161 811 aa8.43□□□□□ -1.06
HMS1YOR032C NMA111P53920 997 aa8.43□□□□□ -1.06
HMS1YOR032C TAF7Q05021 590 aa8.42□□□□□ -1.06
HMS1YOR032C CDC73Q06697 393 aa8.42□□□□□ -1.06
HMS1YOR032C YDR090CQ03193 310 aa8.41□□□□□ -1.06
HMS1YOR032C BNI4P53858 892 aa8.4□□□□□ -1.06
HMS1YOR032C REF2P42073 533 aaPredicted RBP8.38□□□□□ -1.07
HMS1YOR032C PTC2P39966 464 aaKnown RBP8.35□□□□□ -1.07
HMS1YOR032C KIC1P38692 1080 aa8.33□□□□□ -1.08
HMS1YOR032C XDJ1P39102 459 aa8.33□□□□□ -1.08
HMS1YOR032C ISU2Q12056 156 aa8.33□□□□□ -1.08
HMS1YOR032C YML082WQ04533 649 aaKnown RBP8.32□□□□□ -1.08
HMS1YOR032C CKB1P43639 278 aa8.3□□□□□ -1.08
HMS1YOR032C YPR015CQ12531 247 aa8.29□□□□□ -1.08
HMS1YOR032C PDR1P12383 1068 aa8.28□□□□□ -1.08
HMS1YOR032C RPP1BP10622 106 aaKnown RBP8.27□□□□□ -1.09
HMS1YOR032C RAM1P22007 431 aa8.27□□□□□ -1.09
HMS1YOR032C SPB4P25808 606 aaPredicted RBP8.27□□□□□ -1.09
HMS1YOR032C COX6P00427 148 aa8.25□□□□□ -1.09
HMS1YOR032C MAK21Q12176 1025 aaKnown RBP8.24□□□□□ -1.09
HMS1YOR032C GAP1P19145 602 aaPredicted RBP8.23□□□□□ -1.09
HMS1YOR032C ORC6P38826 435 aa8.23□□□□□ -1.09
HMS1YOR032C RPN1P38764 993 aaKnown RBP8.22□□□□□ -1.09
HMS1YOR032C PBS2P08018 668 aa8.2□□□□□ -1.1
HMS1YOR032C PEX21P50091 288 aa8.19□□□□□ -1.1
HMS1YOR032C CSC1Q06538 782 aa8.19□□□□□ -1.1
HMS1YOR032C YRR1Q12172 810 aa8.19□□□□□ -1.1
HMS1YOR032C DPS1P04802 557 aaKnown RBP8.17□□□□□ -1.1
HMS1YOR032C TFB4Q12004 338 aa8.17□□□□□ -1.1
HMS1YOR032C TUM1Q08686 304 aaKnown RBP8.16□□□□□ -1.1
HMS1YOR032C MVP1P40959 511 aaKnown RBP8.12□□□□□ -1.11
HMS1YOR032C GYP1Q08484 637 aa8.12□□□□□ -1.11
HMS1YOR032C RGR1P19263 1082 aa8.1□□□□□ -1.11
HMS1YOR032C STR2P47164 639 aa8.1□□□□□ -1.11
HMS1YOR032C NUD1P32336 851 aa8.09□□□□□ -1.11
HMS1YOR032C DSF2P38213 736 aa8.09□□□□□ -1.11
HMS1YOR032C BUD20Q08004 166 aaPredicted RBP8.09□□□□□ -1.11
HMS1YOR032C ISM1P48526 1002 aa8.08□□□□□ -1.12
HMS1YOR032C MAM3Q12296 706 aa8.08□□□□□ -1.12
HMS1YOR032C YPR109WQ06104 294 aa8.06□□□□□ -1.12
HMS1YOR032C IES2P40154 320 aa8.05□□□□□ -1.12
HMS1YOR032C SDH2P21801 266 aa8.04□□□□□ -1.12
HMS1YOR032C RAS1P01119 309 aa8.03□□□□□ -1.12
HMS1YOR032C SAS4Q04003 481 aa8.03□□□□□ -1.12
HMS1YOR032C PRT1P06103 763 aaKnown RBP8.03□□□□□ -1.12
HMS1YOR032C PSE1P32337 1089 aaKnown RBP8.02□□□□□ -1.13
HMS1YOR032C NPL4P33755 580 aa8.02□□□□□ -1.13
HMS1YOR032C TY1A-DR4O74302 440 aa8.01□□□□□ -1.13
HMS1YOR032C TY1A-HP0C2I4 478 aaKnown RBP8.01□□□□□ -1.13
HMS1YOR032C TY1A-AP0CX57 440 aa8.01□□□□□ -1.13
HMS1YOR032C TY1A-PR1P0CX58 440 aa8.01□□□□□ -1.13
HMS1YOR032C TY1A-ORP0CX59 440 aa8.01□□□□□ -1.13
HMS1YOR032C TY1A-PR2P0CX60 440 aa8.01□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 138.9 ms