RNA–Protein interactions for RNA: YOR032C

HMS1, Transcript of bHLH protein with similarity to myc-family transcription factors, yeastyeast

Gene HMS1, Length 1,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMS1YOR032C MTC1P47018 478 aaKnown RBP15.16■□□□□ 0.02
HMS1YOR032C DRS1P32892 752 aaKnown RBP14.32□□□□□ -0.12
HMS1YOR032C FAP1P53971 965 aa13.48□□□□□ -0.25
HMS1YOR032C PRI1P10363 409 aa12.68□□□□□ -0.38
HMS1YOR032C PRY3P47033 881 aa12.66□□□□□ -0.38
HMS1YOR032C AAD16Q02895 342 aa12.58□□□□□ -0.4
HMS1YOR032C ISW2Q08773 1120 aa12.5□□□□□ -0.41
HMS1YOR032C DIP2Q12220 943 aaPredicted RBP12.49□□□□□ -0.41
HMS1YOR032C RPG1P38249 964 aaKnown RBP12.39□□□□□ -0.43
HMS1YOR032C AVT3P36062 692 aa12.09□□□□□ -0.47
HMS1YOR032C TSR3Q12094 313 aaKnown RBP12.03□□□□□ -0.48
HMS1YOR032C RSE1Q04693 1361 aaKnown RBP12.02□□□□□ -0.49
HMS1YOR032C YCK3P39962 524 aa11.99□□□□□ -0.49
HMS1YOR032C BFR2Q06631 534 aaKnown RBP11.97□□□□□ -0.49
HMS1YOR032C HAA1Q12753 694 aaKnown RBP11.85□□□□□ -0.51
HMS1YOR032C RPL17AP05740 184 aaKnown RBP11.65□□□□□ -0.54
HMS1YOR032C RPL17BP46990 184 aaKnown RBP11.65□□□□□ -0.54
HMS1YOR032C REB1P21538 810 aa11.58□□□□□ -0.56
HMS1YOR032C MRPL32P25348 183 aa11.51□□□□□ -0.57
HMS1YOR032C SPT21P35209 758 aa11.16□□□□□ -0.62
HMS1YOR032C YKR023WP36119 530 aaKnown RBP11.01□□□□□ -0.65
HMS1YOR032C CDC27P38042 758 aa11.01□□□□□ -0.65
HMS1YOR032C TFA1P36100 482 aa11□□□□□ -0.65
HMS1YOR032C YGL015CP33199 130 aa10.98□□□□□ -0.65
HMS1YOR032C HOP09932 586 aa10.8□□□□□ -0.68
HMS1YOR032C RIM101P33400 625 aa10.79□□□□□ -0.68
HMS1YOR032C DCD1P06773 312 aa10.77□□□□□ -0.69
HMS1YOR032C TFC8Q12308 588 aa10.77□□□□□ -0.69
HMS1YOR032C MAP2P38174 421 aaKnown RBP10.64□□□□□ -0.71
HMS1YOR032C UBP10P53874 792 aaPredicted RBP10.63□□□□□ -0.71
HMS1YOR032C OXP1P28273 1286 aa10.46□□□□□ -0.73
HMS1YOR032C SCY1P53009 804 aa10.45□□□□□ -0.74
HMS1YOR032C BCH2P36122 765 aa10.43□□□□□ -0.74
HMS1YOR032C SLX5P32828 619 aaKnown RBP10.29□□□□□ -0.76
HMS1YOR032C PTP3P40048 928 aa10.28□□□□□ -0.76
HMS1YOR032C YIL055CP40523 627 aaKnown RBP10.27□□□□□ -0.77
HMS1YOR032C EPS1P40557 701 aa10.19□□□□□ -0.78
HMS1YOR032C YAH1Q12184 172 aaKnown RBP10.18□□□□□ -0.78
HMS1YOR032C TIF4632P39936 914 aaKnown RBP10.17□□□□□ -0.78
HMS1YOR032C BDF1P35817 686 aa10.13□□□□□ -0.79
HMS1YOR032C TGL3P40308 642 aa10.12□□□□□ -0.79
HMS1YOR032C RSM7P47150 247 aa10.12□□□□□ -0.79
HMS1YOR032C AI2P03876 854 aa10.04□□□□□ -0.8
HMS1YOR032C BUD31P25337 157 aaPredicted RBP10.01□□□□□ -0.81
HMS1YOR032C BBC1P47068 1157 aa10□□□□□ -0.81
HMS1YOR032C YLR271WQ06152 274 aa10□□□□□ -0.81
HMS1YOR032C SSP1P38871 571 aa9.89□□□□□ -0.83
HMS1YOR032C PSD2P53037 1138 aaKnown RBP9.82□□□□□ -0.84
HMS1YOR032C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.8□□□□□ -0.84not detected
HMS1YOR032C UBP9P39967 754 aa9.76□□□□□ -0.85
HMS1YOR032C RQC2Q12532 1038 aaKnown RBP9.76□□□□□ -0.85
HMS1YOR032C NSR1P27476 414 aaKnown RBP RIP-Chip data9.73□□□□□ -0.85not detected
HMS1YOR032C MST1P07236 462 aa9.72□□□□□ -0.85
HMS1YOR032C YOR238WQ08634 303 aa9.71□□□□□ -0.86
HMS1YOR032C MRM1P25270 412 aa9.69□□□□□ -0.86
HMS1YOR032C YAP5P40574 245 aa9.67□□□□□ -0.86
HMS1YOR032C CST9Q06032 482 aa9.67□□□□□ -0.86
HMS1YOR032C MGA2P40578 1113 aa9.63□□□□□ -0.87
HMS1YOR032C YBL029C-AQ3E756 94 aa9.59□□□□□ -0.87
HMS1YOR032C SIS1P25294 352 aaKnown RBP9.56□□□□□ -0.88
HMS1YOR032C PIB1Q06651 286 aa9.54□□□□□ -0.88
HMS1YOR032C VNX1P42839 908 aa9.48□□□□□ -0.89
HMS1YOR032C WSC3Q12215 556 aa9.48□□□□□ -0.89
HMS1YOR032C GTT3P39996 337 aa9.47□□□□□ -0.89
HMS1YOR032C RTG3P38165 486 aa9.46□□□□□ -0.9
HMS1YOR032C VPS29P38759 282 aa9.46□□□□□ -0.9
HMS1YOR032C RCR1P38212 213 aa9.44□□□□□ -0.9
HMS1YOR032C YMR1P47147 688 aaKnown RBP RIP-Chip data9.41□□□□□ -0.9not detected
HMS1YOR032C DBP1P24784 617 aaKnown RBP9.39□□□□□ -0.91
HMS1YOR032C SPP1Q03012 353 aa9.39□□□□□ -0.91
HMS1YOR032C YFR006WP43590 535 aa9.38□□□□□ -0.91
HMS1YOR032C STS1P38637 319 aa9.37□□□□□ -0.91
HMS1YOR032C TIF11P38912 153 aaKnown RBP9.31□□□□□ -0.92
HMS1YOR032C VMA1P17255 1071 aaKnown RBP9.27□□□□□ -0.93
HMS1YOR032C YOL036WQ08206 761 aa9.25□□□□□ -0.93
HMS1YOR032C SET4P42948 560 aa9.23□□□□□ -0.93
HMS1YOR032C ULI1P43604 169 aa9.22□□□□□ -0.93
HMS1YOR032C MSB4Q12317 492 aa9.22□□□□□ -0.93
HMS1YOR032C DMA1P38823 416 aa9.19□□□□□ -0.94
HMS1YOR032C SAM3Q08986 587 aa9.19□□□□□ -0.94
HMS1YOR032C IOC2Q12072 812 aa9.19□□□□□ -0.94
HMS1YOR032C LDB19Q12502 818 aa9.19□□□□□ -0.94
HMS1YOR032C RAM2P29703 316 aa9.18□□□□□ -0.94
HMS1YOR032C FKH1P40466 484 aa9.17□□□□□ -0.94
HMS1YOR032C AIR2Q12476 344 aaKnown RBP9.15□□□□□ -0.94
HMS1YOR032C EAP1P36041 632 aaKnown RBP9.14□□□□□ -0.95
HMS1YOR032C TRP5P00931 707 aaKnown RBP9.12□□□□□ -0.95
HMS1YOR032C MAK11P20484 414 aaKnown RBP9.09□□□□□ -0.95
HMS1YOR032C GYP5Q12344 894 aa9.07□□□□□ -0.96
HMS1YOR032C RTG1P32607 177 aa9.05□□□□□ -0.96
HMS1YOR032C MIF2P35201 549 aa9.05□□□□□ -0.96
HMS1YOR032C EDS1P38073 919 aa9.03□□□□□ -0.96
HMS1YOR032C YJL171CP46992 396 aa9.03□□□□□ -0.96
HMS1YOR032C DCW1P36091 449 aa9.02□□□□□ -0.97
HMS1YOR032C ABP1P15891 592 aaKnown RBP9□□□□□ -0.97
HMS1YOR032C YNL035CP53962 389 aaKnown RBP9□□□□□ -0.97
HMS1YOR032C COQ8P27697 501 aa8.99□□□□□ -0.97
HMS1YOR032C HTA1P04911 132 aaKnown RBP8.98□□□□□ -0.97
HMS1YOR032C HTA2P04912 132 aa8.98□□□□□ -0.97
HMS1YOR032C GRE2Q12068 342 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms