RNA–Protein interactions for RNA: YNR060W

FRE4, Transcript of Ferric reductase, yeastyeast

Gene FRE4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FRE4YNR060W NUP42P49686 430 aaKnown RBP5.35□□□□□ -1.55
FRE4YNR060W GUT1P32190 709 aa5.34□□□□□ -1.55
FRE4YNR060W YBL029C-AQ3E756 94 aa5.33□□□□□ -1.56
FRE4YNR060W COX6P00427 148 aa5.33□□□□□ -1.56
FRE4YNR060W GRE2Q12068 342 aaKnown RBP5.33□□□□□ -1.56
FRE4YNR060W VNX1P42839 908 aa5.32□□□□□ -1.56
FRE4YNR060W YLR326WQ06170 240 aaKnown RBP5.32□□□□□ -1.56
FRE4YNR060W AIM7Q12156 149 aa5.32□□□□□ -1.56
FRE4YNR060W YGR273CP53329 174 aa5.31□□□□□ -1.56
FRE4YNR060W DIT2P21595 489 aa5.31□□□□□ -1.56
FRE4YNR060W IES2P40154 320 aa5.31□□□□□ -1.56
FRE4YNR060W ATH1P48016 1211 aa5.31□□□□□ -1.56
FRE4YNR060W YOL036WQ08206 761 aa5.31□□□□□ -1.56
FRE4YNR060W MAK21Q12176 1025 aaKnown RBP5.31□□□□□ -1.56
FRE4YNR060W MAM3Q12296 706 aa5.31□□□□□ -1.56
FRE4YNR060W GLC3P32775 704 aa5.3□□□□□ -1.56
FRE4YNR060W WSC3Q12215 556 aa5.3□□□□□ -1.56
FRE4YNR060W GYP5Q12344 894 aa5.3□□□□□ -1.56
FRE4YNR060W VHR2P40041 505 aa5.29□□□□□ -1.56
FRE4YNR060W GUA1P38625 525 aaKnown RBP5.29□□□□□ -1.56
FRE4YNR060W ILV3P39522 585 aaKnown RBP5.28□□□□□ -1.56
FRE4YNR060W MSB4Q12317 492 aa5.28□□□□□ -1.56
FRE4YNR060W NOP8Q08287 484 aaPredicted RBP5.27□□□□□ -1.57
FRE4YNR060W KEX1P09620 729 aa5.26□□□□□ -1.57
FRE4YNR060W PCS60P38137 543 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
FRE4YNR060W SPP1Q03012 353 aa5.26□□□□□ -1.57
FRE4YNR060W TIF11P38912 153 aaKnown RBP5.26□□□□□ -1.57
FRE4YNR060W SET4P42948 560 aa5.26□□□□□ -1.57
FRE4YNR060W YML020WQ03722 664 aa5.25□□□□□ -1.57
FRE4YNR060W ORC1P54784 914 aaPredicted RBP5.25□□□□□ -1.57
FRE4YNR060W DCW1P36091 449 aa5.24□□□□□ -1.57
FRE4YNR060W EAP1P36041 632 aaKnown RBP5.23□□□□□ -1.57
FRE4YNR060W MPH3P0CE00 602 aa5.22□□□□□ -1.57
FRE4YNR060W HGH1P48362 394 aaKnown RBP5.22□□□□□ -1.57
FRE4YNR060W AI4P03878 556 aa5.22□□□□□ -1.57
FRE4YNR060W IOC2Q12072 812 aa5.22□□□□□ -1.57
FRE4YNR060W ORC6P38826 435 aa5.21□□□□□ -1.58
FRE4YNR060W ULI1P43604 169 aa5.21□□□□□ -1.58
FRE4YNR060W HPC2Q01448 625 aa5.21□□□□□ -1.58
FRE4YNR060W HTA1P04911 132 aaKnown RBP5.21□□□□□ -1.58
FRE4YNR060W HTA2P04912 132 aa5.21□□□□□ -1.58
FRE4YNR060W TRP5P00931 707 aaKnown RBP5.19□□□□□ -1.58
FRE4YNR060W RAD54P32863 898 aa5.19□□□□□ -1.58
FRE4YNR060W GAP1P19145 602 aaPredicted RBP5.19□□□□□ -1.58
FRE4YNR060W YEL023CP39992 682 aa5.19□□□□□ -1.58
FRE4YNR060W TFB3Q03290 321 aa5.18□□□□□ -1.58
FRE4YNR060W SUB2Q07478 446 aaKnown RBP5.18□□□□□ -1.58
FRE4YNR060W SIS1P25294 352 aaKnown RBP5.18□□□□□ -1.58
FRE4YNR060W SLX8P40072 274 aa5.18□□□□□ -1.58
FRE4YNR060W PSE1P32337 1089 aaKnown RBP5.17□□□□□ -1.58
FRE4YNR060W SLI15P38283 698 aa5.17□□□□□ -1.58
FRE4YNR060W DAN4P47179 1161 aa5.17□□□□□ -1.58
FRE4YNR060W SSA1P10591 642 aaKnown RBP5.16□□□□□ -1.58
FRE4YNR060W GEF1P37020 779 aa5.16□□□□□ -1.58
FRE4YNR060W LDB19Q12502 818 aa5.16□□□□□ -1.58
FRE4YNR060W PTC4P38089 393 aa5.15□□□□□ -1.58
FRE4YNR060W PKC1P24583 1151 aa5.15□□□□□ -1.59
FRE4YNR060W RGR1P19263 1082 aa5.14□□□□□ -1.59
FRE4YNR060W JIP4Q03361 876 aa5.14□□□□□ -1.59
FRE4YNR060W GLN1P32288 370 aaKnown RBP5.14□□□□□ -1.59
FRE4YNR060W YNL035CP53962 389 aaKnown RBP5.14□□□□□ -1.59
FRE4YNR060W AIM44Q99299 758 aa5.14□□□□□ -1.59
FRE4YNR060W NAP1P25293 417 aaKnown RBP5.13□□□□□ -1.59
FRE4YNR060W KIC1P38692 1080 aa5.13□□□□□ -1.59
FRE4YNR060W FKH1P40466 484 aa5.13□□□□□ -1.59
FRE4YNR060W MVP1P40959 511 aaKnown RBP5.12□□□□□ -1.59
FRE4YNR060W ATF2P53296 535 aa5.12□□□□□ -1.59
FRE4YNR060W RTG1P32607 177 aa5.12□□□□□ -1.59
FRE4YNR060W SEC61P32915 480 aa5.11□□□□□ -1.59
FRE4YNR060W IOC4Q04213 475 aa5.11□□□□□ -1.59
FRE4YNR060W CDC73Q06697 393 aa5.11□□□□□ -1.59
FRE4YNR060W AIR2Q12476 344 aaKnown RBP5.11□□□□□ -1.59
FRE4YNR060W KTR1P27810 393 aaKnown RBP5.1□□□□□ -1.59
FRE4YNR060W BIM1P40013 344 aa5.09□□□□□ -1.59
FRE4YNR060W MRX12P47084 519 aa5.09□□□□□ -1.59
FRE4YNR060W NCR1Q12200 1170 aa5.09□□□□□ -1.59
FRE4YNR060W ATG32P40458 529 aa5.08□□□□□ -1.6
FRE4YNR060W MID1P41821 548 aa5.08□□□□□ -1.6
FRE4YNR060W BRL1P38770 471 aa5.08□□□□□ -1.6
FRE4YNR060W CSC1Q06538 782 aa5.06□□□□□ -1.6
FRE4YNR060W TEA1P47988 759 aa5.06□□□□□ -1.6
FRE4YNR060W NIS1P53939 407 aa5.06□□□□□ -1.6
FRE4YNR060W MPC54Q08550 464 aa5.06□□□□□ -1.6
FRE4YNR060W SSA2P10592 639 aaKnown RBP5.05□□□□□ -1.6
FRE4YNR060W YJL007CP47080 104 aa5.05□□□□□ -1.6
FRE4YNR060W PML39Q03760 334 aa5.05□□□□□ -1.6
FRE4YNR060W CSN12P47130 423 aa5.04□□□□□ -1.6
FRE4YNR060W YPR109WQ06104 294 aa5.04□□□□□ -1.6
FRE4YNR060W TFG1P41895 735 aaPredicted RBP5.04□□□□□ -1.6
FRE4YNR060W TFB4Q12004 338 aa5.04□□□□□ -1.6
FRE4YNR060W ERG12P07277 443 aa5.03□□□□□ -1.6
FRE4YNR060W SIT4P20604 311 aa5.03□□□□□ -1.6
FRE4YNR060W SSA4P22202 642 aaKnown RBP5.03□□□□□ -1.6
FRE4YNR060W YDR344CQ05510 147 aa5.03□□□□□ -1.6
FRE4YNR060W DPL1Q05567 589 aa5.03□□□□□ -1.6
FRE4YNR060W TIF1P10081 395 aaKnown RBP5.02□□□□□ -1.61
FRE4YNR060W CLB5P30283 435 aa5.02□□□□□ -1.61
FRE4YNR060W YDL129WQ07555 291 aa5.02□□□□□ -1.61
FRE4YNR060W YJL171CP46992 396 aa5.02□□□□□ -1.61
FRE4YNR060W FPK1P53739 893 aa5.02□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms