RNA–Protein interactions for RNA: YNR060W

FRE4, Transcript of Ferric reductase, yeastyeast

Gene FRE4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FRE4YNR060W DRS1P32892 752 aaKnown RBP8.79□□□□□ -1
FRE4YNR060W MTC1P47018 478 aaKnown RBP8.7□□□□□ -1.02
FRE4YNR060W BFR2Q06631 534 aaKnown RBP7.63□□□□□ -1.19
FRE4YNR060W AVT3P36062 692 aa7.49□□□□□ -1.21
FRE4YNR060W TFA1P36100 482 aa7.48□□□□□ -1.21
FRE4YNR060W DIP2Q12220 943 aaPredicted RBP7.47□□□□□ -1.21
FRE4YNR060W FAP1P53971 965 aa7.32□□□□□ -1.24
FRE4YNR060W PRI1P10363 409 aa7.09□□□□□ -1.27
FRE4YNR060W ISW2Q08773 1120 aa7.08□□□□□ -1.28
FRE4YNR060W AAD16Q02895 342 aa6.99□□□□□ -1.29
FRE4YNR060W RPG1P38249 964 aaKnown RBP6.99□□□□□ -1.29
FRE4YNR060W RSE1Q04693 1361 aaKnown RBP6.97□□□□□ -1.29
FRE4YNR060W PRY3P47033 881 aa6.87□□□□□ -1.31
FRE4YNR060W RQC2Q12532 1038 aaKnown RBP6.82□□□□□ -1.32
FRE4YNR060W RPL17AP05740 184 aaKnown RBP6.71□□□□□ -1.33
FRE4YNR060W RPL17BP46990 184 aaKnown RBP6.71□□□□□ -1.33
FRE4YNR060W TSR3Q12094 313 aaKnown RBP6.69□□□□□ -1.34
FRE4YNR060W SPT21P35209 758 aa6.61□□□□□ -1.35
FRE4YNR060W REB1P21538 810 aa6.58□□□□□ -1.36
FRE4YNR060W YCK3P39962 524 aa6.55□□□□□ -1.36
FRE4YNR060W RIM101P33400 625 aa6.51□□□□□ -1.37
FRE4YNR060W HAA1Q12753 694 aaKnown RBP6.51□□□□□ -1.37
FRE4YNR060W TAF7Q05021 590 aa6.47□□□□□ -1.37
FRE4YNR060W MRPL32P25348 183 aa6.44□□□□□ -1.38
FRE4YNR060W DMA1P38823 416 aa6.38□□□□□ -1.39
FRE4YNR060W YKR023WP36119 530 aaKnown RBP6.35□□□□□ -1.39
FRE4YNR060W OXP1P28273 1286 aa6.33□□□□□ -1.4
FRE4YNR060W PTP3P40048 928 aa6.26□□□□□ -1.41
FRE4YNR060W SSP1P38871 571 aa6.21□□□□□ -1.41
FRE4YNR060W TFC8Q12308 588 aa6.2□□□□□ -1.42
FRE4YNR060W CDC27P38042 758 aa6.18□□□□□ -1.42
FRE4YNR060W YLR271WQ06152 274 aa6.16□□□□□ -1.42
FRE4YNR060W HOP09932 586 aa6.16□□□□□ -1.42
FRE4YNR060W LEO1P38439 464 aa6.16□□□□□ -1.42
FRE4YNR060W DCD1P06773 312 aa6.13□□□□□ -1.43
FRE4YNR060W YAH1Q12184 172 aaKnown RBP6.13□□□□□ -1.43
FRE4YNR060W YGL015CP33199 130 aa6.1□□□□□ -1.43
FRE4YNR060W YIL055CP40523 627 aaKnown RBP6.07□□□□□ -1.44
FRE4YNR060W RSM7P47150 247 aa6.06□□□□□ -1.44
FRE4YNR060W BCH2P36122 765 aa6.02□□□□□ -1.45
FRE4YNR060W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
FRE4YNR060W PSD2P53037 1138 aaKnown RBP6□□□□□ -1.45
FRE4YNR060W MGA2P40578 1113 aa5.99□□□□□ -1.45
FRE4YNR060W CST9Q06032 482 aa5.99□□□□□ -1.45
FRE4YNR060W UBP10P53874 792 aaPredicted RBP5.98□□□□□ -1.45
FRE4YNR060W AI2P03876 854 aa5.96□□□□□ -1.46
FRE4YNR060W MAP2P38174 421 aaKnown RBP5.94□□□□□ -1.46
FRE4YNR060W SAS10Q12136 610 aaPredicted RBP5.91□□□□□ -1.46
FRE4YNR060W LEU3P08638 886 aa5.9□□□□□ -1.46
FRE4YNR060W EPS1P40557 701 aa5.89□□□□□ -1.47
FRE4YNR060W SCY1P53009 804 aa5.89□□□□□ -1.47
FRE4YNR060W BDF1P35817 686 aa5.87□□□□□ -1.47
FRE4YNR060W BBC1P47068 1157 aa5.83□□□□□ -1.48
FRE4YNR060W SLX5P32828 619 aaKnown RBP5.8□□□□□ -1.48
FRE4YNR060W RCR1P38212 213 aa5.79□□□□□ -1.48
FRE4YNR060W RAM2P29703 316 aa5.79□□□□□ -1.48
FRE4YNR060W MRM1P25270 412 aa5.77□□□□□ -1.49
FRE4YNR060W TIF4632P39936 914 aaKnown RBP5.72□□□□□ -1.49
FRE4YNR060W TGL3P40308 642 aa5.72□□□□□ -1.49
FRE4YNR060W VPS29P38759 282 aa5.7□□□□□ -1.5
FRE4YNR060W ABP1P15891 592 aaKnown RBP5.7□□□□□ -1.5
FRE4YNR060W DMA2P53924 522 aa5.7□□□□□ -1.5
FRE4YNR060W RTG3P38165 486 aa5.69□□□□□ -1.5
FRE4YNR060W RPN1P38764 993 aaKnown RBP5.65□□□□□ -1.51
FRE4YNR060W MAK11P20484 414 aaKnown RBP5.64□□□□□ -1.51
FRE4YNR060W SET1P38827 1080 aaKnown RBP5.62□□□□□ -1.51
FRE4YNR060W YPR148CQ06523 435 aa5.62□□□□□ -1.51
FRE4YNR060W STS1P38637 319 aa5.62□□□□□ -1.51
FRE4YNR060W NSR1P27476 414 aaKnown RBP RIP-Chip data5.59□□□□□ -1.52not detected
FRE4YNR060W YMR1P47147 688 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
FRE4YNR060W COQ8P27697 501 aa5.56□□□□□ -1.52
FRE4YNR060W EDS1P38073 919 aa5.56□□□□□ -1.52
FRE4YNR060W RLF2Q12495 606 aa5.55□□□□□ -1.52
FRE4YNR060W MST1P07236 462 aa5.54□□□□□ -1.52
FRE4YNR060W DBP1P24784 617 aaKnown RBP5.54□□□□□ -1.52
FRE4YNR060W YAP5P40574 245 aa5.52□□□□□ -1.53
FRE4YNR060W YFR006WP43590 535 aa5.52□□□□□ -1.53
FRE4YNR060W CKB1P43639 278 aa5.52□□□□□ -1.53
FRE4YNR060W YOR238WQ08634 303 aa5.52□□□□□ -1.53
FRE4YNR060W VPS70P47161 811 aa5.5□□□□□ -1.53
FRE4YNR060W NOP53Q12080 455 aaKnown RBP5.5□□□□□ -1.53
FRE4YNR060W IFH1P39520 1085 aa5.49□□□□□ -1.53
FRE4YNR060W MIF2P35201 549 aa5.46□□□□□ -1.53
FRE4YNR060W PTC3P34221 468 aaKnown RBP5.46□□□□□ -1.54
FRE4YNR060W PIB1Q06651 286 aa5.46□□□□□ -1.54
FRE4YNR060W VMA1P17255 1071 aaKnown RBP5.45□□□□□ -1.54
FRE4YNR060W SPB4P25808 606 aaPredicted RBP5.45□□□□□ -1.54
FRE4YNR060W DSF2P38213 736 aa5.44□□□□□ -1.54
FRE4YNR060W BUD31P25337 157 aaPredicted RBP5.43□□□□□ -1.54
FRE4YNR060W SAM3Q08986 587 aa5.42□□□□□ -1.54
FRE4YNR060W UBP9P39967 754 aa5.41□□□□□ -1.54
FRE4YNR060W PBS2P08018 668 aa5.39□□□□□ -1.55
FRE4YNR060W KIN1P13185 1064 aa5.38□□□□□ -1.55
FRE4YNR060W REF2P42073 533 aaPredicted RBP5.38□□□□□ -1.55
FRE4YNR060W SOL3P38858 249 aa5.37□□□□□ -1.55
FRE4YNR060W NST1P53935 1240 aa5.37□□□□□ -1.55
FRE4YNR060W UBP14P38237 781 aaKnown RBP5.36□□□□□ -1.55
FRE4YNR060W YNR021WP53723 404 aaKnown RBP5.36□□□□□ -1.55
FRE4YNR060W YDR090CQ03193 310 aa5.36□□□□□ -1.55
FRE4YNR060W GTT3P39996 337 aa5.35□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms