RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W GUT1P32190 709 aa6.1□□□□□ -1.43
VPS27YNR006W ATH1P48016 1211 aa6.1□□□□□ -1.43
VPS27YNR006W MAK21Q12176 1025 aaKnown RBP6.1□□□□□ -1.43
VPS27YNR006W YBL029C-AQ3E756 94 aa6.1□□□□□ -1.43
VPS27YNR006W DIT2P21595 489 aa6.09□□□□□ -1.44
VPS27YNR006W UBP14P38237 781 aaKnown RBP6.09□□□□□ -1.44
VPS27YNR006W VHR2P40041 505 aa6.08□□□□□ -1.44
VPS27YNR006W YDR090CQ03193 310 aa6.08□□□□□ -1.44
VPS27YNR006W GLC3P32775 704 aa6.07□□□□□ -1.44
VPS27YNR006W GYP5Q12344 894 aa6.07□□□□□ -1.44
VPS27YNR006W SOL3P38858 249 aa6.06□□□□□ -1.44
VPS27YNR006W YGR273CP53329 174 aa6.06□□□□□ -1.44
VPS27YNR006W YLR326WQ06170 240 aaKnown RBP6.06□□□□□ -1.44
VPS27YNR006W KIN1P13185 1064 aa6.05□□□□□ -1.44
VPS27YNR006W GTT3P39996 337 aa6.05□□□□□ -1.44
VPS27YNR006W VNX1P42839 908 aa6.05□□□□□ -1.44
VPS27YNR006W AIM7Q12156 149 aa6.05□□□□□ -1.44
VPS27YNR006W WSC3Q12215 556 aa6.03□□□□□ -1.44
VPS27YNR006W NST1P53935 1240 aa6.02□□□□□ -1.44
VPS27YNR006W YOL036WQ08206 761 aa6.02□□□□□ -1.44
VPS27YNR006W KEX1P09620 729 aa6.01□□□□□ -1.45
VPS27YNR006W DCW1P36091 449 aa6□□□□□ -1.45
VPS27YNR006W SPP1Q03012 353 aa6□□□□□ -1.45
VPS27YNR006W PCS60P38137 543 aaKnown RBP RIP-Chip data6□□□□□ -1.45 RIP-Chip
VPS27YNR006W SET4P42948 560 aa6□□□□□ -1.45
VPS27YNR006W RAD54P32863 898 aa5.98□□□□□ -1.45
VPS27YNR006W KIC1P38692 1080 aa5.97□□□□□ -1.45
VPS27YNR006W HTA1P04911 132 aaKnown RBP5.96□□□□□ -1.45
VPS27YNR006W HTA2P04912 132 aa5.96□□□□□ -1.45
VPS27YNR006W ATF2P53296 535 aa5.96□□□□□ -1.45
VPS27YNR006W MSB4Q12317 492 aa5.96□□□□□ -1.45
VPS27YNR006W ILV3P39522 585 aaKnown RBP5.95□□□□□ -1.46
VPS27YNR006W MPH3P0CE00 602 aa5.94□□□□□ -1.46
VPS27YNR006W GUA1P38625 525 aaKnown RBP5.94□□□□□ -1.46
VPS27YNR006W TIF11P38912 153 aaKnown RBP5.94□□□□□ -1.46
VPS27YNR006W PSE1P32337 1089 aaKnown RBP5.94□□□□□ -1.46
VPS27YNR006W AI4P03878 556 aa5.93□□□□□ -1.46
VPS27YNR006W ORC6P38826 435 aa5.92□□□□□ -1.46
VPS27YNR006W YEL023CP39992 682 aa5.91□□□□□ -1.46
VPS27YNR006W ORC1P54784 914 aaPredicted RBP5.91□□□□□ -1.46
VPS27YNR006W YML020WQ03722 664 aa5.9□□□□□ -1.46
VPS27YNR006W EAP1P36041 632 aaKnown RBP5.89□□□□□ -1.47
VPS27YNR006W DAN4P47179 1161 aa5.89□□□□□ -1.47
VPS27YNR006W NOP8Q08287 484 aaPredicted RBP5.89□□□□□ -1.47
VPS27YNR006W TRP5P00931 707 aaKnown RBP5.88□□□□□ -1.47
VPS27YNR006W SLI15P38283 698 aa5.88□□□□□ -1.47
VPS27YNR006W ULI1P43604 169 aa5.88□□□□□ -1.47
VPS27YNR006W PTC4P38089 393 aa5.87□□□□□ -1.47
VPS27YNR006W HPC2Q01448 625 aa5.87□□□□□ -1.47
VPS27YNR006W GAP1P19145 602 aaPredicted RBP5.86□□□□□ -1.47
VPS27YNR006W RGR1P19263 1082 aa5.86□□□□□ -1.47
VPS27YNR006W LDB19Q12502 818 aa5.85□□□□□ -1.47
VPS27YNR006W AIM44Q99299 758 aa5.85□□□□□ -1.47
VPS27YNR006W MVP1P40959 511 aaKnown RBP5.85□□□□□ -1.47
VPS27YNR006W FKH1P40466 484 aa5.84□□□□□ -1.47
VPS27YNR006W TEA1P47988 759 aa5.84□□□□□ -1.47
VPS27YNR006W HGH1P48362 394 aaKnown RBP5.84□□□□□ -1.47
VPS27YNR006W IOC2Q12072 812 aa5.84□□□□□ -1.47
VPS27YNR006W JIP4Q03361 876 aa5.83□□□□□ -1.48
VPS27YNR006W AIR2Q12476 344 aaKnown RBP5.83□□□□□ -1.48
VPS27YNR006W NAP1P25293 417 aaKnown RBP5.83□□□□□ -1.48
VPS27YNR006W TFB3Q03290 321 aa5.83□□□□□ -1.48
VPS27YNR006W YJL171CP46992 396 aa5.82□□□□□ -1.48
VPS27YNR006W CSN12P47130 423 aa5.82□□□□□ -1.48
VPS27YNR006W CDC73Q06697 393 aa5.82□□□□□ -1.48
VPS27YNR006W IOC4Q04213 475 aa5.81□□□□□ -1.48
VPS27YNR006W CSC1Q06538 782 aa5.81□□□□□ -1.48
VPS27YNR006W KTR1P27810 393 aaKnown RBP5.8□□□□□ -1.48
VPS27YNR006W CLB5P30283 435 aa5.8□□□□□ -1.48
VPS27YNR006W SSA2P10592 639 aaKnown RBP5.79□□□□□ -1.48
VPS27YNR006W SLX8P40072 274 aa5.79□□□□□ -1.48
VPS27YNR006W RPP1BP10622 106 aaKnown RBP5.79□□□□□ -1.48
VPS27YNR006W PKC1P24583 1151 aa5.79□□□□□ -1.48
VPS27YNR006W YPR109WQ06104 294 aa5.79□□□□□ -1.48
VPS27YNR006W GEF1P37020 779 aa5.78□□□□□ -1.48
VPS27YNR006W NIS1P53939 407 aa5.78□□□□□ -1.48
VPS27YNR006W SSA1P10591 642 aaKnown RBP5.77□□□□□ -1.49
VPS27YNR006W BRL1P38770 471 aa5.77□□□□□ -1.49
VPS27YNR006W MID1P41821 548 aa5.77□□□□□ -1.49
VPS27YNR006W YNL035CP53962 389 aaKnown RBP5.77□□□□□ -1.49
VPS27YNR006W SUB2Q07478 446 aaKnown RBP5.77□□□□□ -1.49
VPS27YNR006W TYW1Q08960 810 aaKnown RBP5.77□□□□□ -1.49
VPS27YNR006W TFB4Q12004 338 aa5.77□□□□□ -1.49
VPS27YNR006W RTG1P32607 177 aa5.76□□□□□ -1.49
VPS27YNR006W FPK1P53739 893 aa5.76□□□□□ -1.49
VPS27YNR006W PML39Q03760 334 aa5.76□□□□□ -1.49
VPS27YNR006W HST2P53686 357 aa5.75□□□□□ -1.49
VPS27YNR006W DPL1Q05567 589 aa5.75□□□□□ -1.49
VPS27YNR006W MPC54Q08550 464 aa5.75□□□□□ -1.49
VPS27YNR006W TUM1Q08686 304 aaKnown RBP5.74□□□□□ -1.49
VPS27YNR006W PEX21P50091 288 aa5.73□□□□□ -1.49
VPS27YNR006W BMT6Q12291 365 aa5.73□□□□□ -1.49
VPS27YNR006W SIT4P20604 311 aa5.73□□□□□ -1.49
VPS27YNR006W GLN1P32288 370 aaKnown RBP5.73□□□□□ -1.49
VPS27YNR006W SEC61P32915 480 aa5.73□□□□□ -1.49
VPS27YNR006W NCR1Q12200 1170 aa5.73□□□□□ -1.49
VPS27YNR006W SCJ1P25303 377 aa5.72□□□□□ -1.49
VPS27YNR006W YMR196WQ04336 1088 aa5.72□□□□□ -1.49
VPS27YNR006W PEX29Q03370 554 aa5.71□□□□□ -1.5
VPS27YNR006W MMP1Q12372 583 aa5.71□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms