RNA–Protein interactions for RNA: YNL335W

DDI3, Transcript of Protein of unknown function, yeastyeast

Gene DDI3, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDI3YNL335W VHR2P40041 505 aa8.31□□□□□ -1.08
DDI3YNL335W YGR273CP53329 174 aa8.3□□□□□ -1.08
DDI3YNL335W COX6P00427 148 aa8.29□□□□□ -1.08
DDI3YNL335W HTA1P04911 132 aaKnown RBP8.29□□□□□ -1.08
DDI3YNL335W HTA2P04912 132 aa8.29□□□□□ -1.08
DDI3YNL335W IES2P40154 320 aa8.28□□□□□ -1.08
DDI3YNL335W UBP14P38237 781 aaKnown RBP8.26□□□□□ -1.09
DDI3YNL335W UBP9P39967 754 aa8.26□□□□□ -1.09
DDI3YNL335W YBL029C-AQ3E756 94 aa8.26□□□□□ -1.09
DDI3YNL335W EAP1P36041 632 aaKnown RBP8.25□□□□□ -1.09
DDI3YNL335W KIC1P38692 1080 aa8.25□□□□□ -1.09
DDI3YNL335W SOL3P38858 249 aa8.25□□□□□ -1.09
DDI3YNL335W YNR021WP53723 404 aaKnown RBP8.25□□□□□ -1.09
DDI3YNL335W YLR326WQ06170 240 aaKnown RBP8.25□□□□□ -1.09
DDI3YNL335W YDR090CQ03193 310 aa8.23□□□□□ -1.09
DDI3YNL335W KEX1P09620 729 aa8.22□□□□□ -1.09
DDI3YNL335W RAD54P32863 898 aa8.22□□□□□ -1.09
DDI3YNL335W VNX1P42839 908 aa8.22□□□□□ -1.09
DDI3YNL335W NUP42P49686 430 aaKnown RBP8.21□□□□□ -1.1
DDI3YNL335W TAF7Q05021 590 aa8.21□□□□□ -1.1
DDI3YNL335W YEL023CP39992 682 aa8.2□□□□□ -1.1
DDI3YNL335W DIT2P21595 489 aa8.19□□□□□ -1.1
DDI3YNL335W NST1P53935 1240 aa8.19□□□□□ -1.1
DDI3YNL335W TRP5P00931 707 aaKnown RBP8.18□□□□□ -1.1
DDI3YNL335W AI4P03878 556 aa8.18□□□□□ -1.1
DDI3YNL335W TIF11P38912 153 aaKnown RBP8.18□□□□□ -1.1
DDI3YNL335W SPP1Q03012 353 aa8.18□□□□□ -1.1
DDI3YNL335W MPH3P0CE00 602 aa8.17□□□□□ -1.1
DDI3YNL335W GLC3P32775 704 aa8.17□□□□□ -1.1
DDI3YNL335W PCS60P38137 543 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1not detected
DDI3YNL335W ULI1P43604 169 aa8.17□□□□□ -1.1
DDI3YNL335W PTC4P38089 393 aa8.15□□□□□ -1.1
DDI3YNL335W AIM7Q12156 149 aa8.15□□□□□ -1.1
DDI3YNL335W KIN1P13185 1064 aa8.13□□□□□ -1.11
DDI3YNL335W JIP4Q03361 876 aa8.13□□□□□ -1.11
DDI3YNL335W ILV3P39522 585 aaKnown RBP8.12□□□□□ -1.11
DDI3YNL335W DAN4P47179 1161 aa8.12□□□□□ -1.11
DDI3YNL335W ATF2P53296 535 aa8.12□□□□□ -1.11
DDI3YNL335W PSE1P32337 1089 aaKnown RBP8.09□□□□□ -1.11
DDI3YNL335W IOC2Q12072 812 aa8.08□□□□□ -1.12
DDI3YNL335W RPP1BP10622 106 aaKnown RBP8.07□□□□□ -1.12
DDI3YNL335W YNL035CP53962 389 aaKnown RBP8.07□□□□□ -1.12
DDI3YNL335W SLI15P38283 698 aa8.06□□□□□ -1.12
DDI3YNL335W ORC6P38826 435 aa8.06□□□□□ -1.12
DDI3YNL335W DMA2P53924 522 aa8.04□□□□□ -1.12
DDI3YNL335W LDB19Q12502 818 aa8.04□□□□□ -1.12
DDI3YNL335W RTG1P32607 177 aa8.02□□□□□ -1.13
DDI3YNL335W BUD31P25337 157 aaPredicted RBP8.01□□□□□ -1.13
DDI3YNL335W SEC61P32915 480 aa8□□□□□ -1.13
DDI3YNL335W PML39Q03760 334 aa8□□□□□ -1.13
DDI3YNL335W TFG1P41895 735 aaPredicted RBP7.99□□□□□ -1.13
DDI3YNL335W CSC1Q06538 782 aa7.99□□□□□ -1.13
DDI3YNL335W RGR1P19263 1082 aa7.97□□□□□ -1.13
DDI3YNL335W CLB5P30283 435 aa7.97□□□□□ -1.13
DDI3YNL335W MVP1P40959 511 aaKnown RBP7.97□□□□□ -1.13
DDI3YNL335W TEA1P47988 759 aa7.97□□□□□ -1.13
DDI3YNL335W CDC73Q06697 393 aa7.97□□□□□ -1.13
DDI3YNL335W MID1P41821 548 aa7.96□□□□□ -1.14
DDI3YNL335W HGH1P48362 394 aaKnown RBP7.96□□□□□ -1.14
DDI3YNL335W PEX21P50091 288 aa7.96□□□□□ -1.14
DDI3YNL335W GAP1P19145 602 aaPredicted RBP7.95□□□□□ -1.14
DDI3YNL335W PEX29Q03370 554 aa7.95□□□□□ -1.14
DDI3YNL335W GUA1P38625 525 aaKnown RBP7.94□□□□□ -1.14
DDI3YNL335W DPL1Q05567 589 aa7.94□□□□□ -1.14
DDI3YNL335W TFB4Q12004 338 aa7.94□□□□□ -1.14
DDI3YNL335W NCR1Q12200 1170 aa7.94□□□□□ -1.14
DDI3YNL335W MPC54Q08550 464 aa7.92□□□□□ -1.14
DDI3YNL335W YDL129WQ07555 291 aa7.91□□□□□ -1.14
DDI3YNL335W YPR109WQ06104 294 aa7.9□□□□□ -1.14
DDI3YNL335W SSA2P10592 639 aaKnown RBP7.89□□□□□ -1.15
DDI3YNL335W HPC2Q01448 625 aa7.89□□□□□ -1.15
DDI3YNL335W FKH1P40466 484 aa7.88□□□□□ -1.15
DDI3YNL335W CSN12P47130 423 aa7.88□□□□□ -1.15
DDI3YNL335W TUM1Q08686 304 aaKnown RBP7.88□□□□□ -1.15
DDI3YNL335W ISU2Q12056 156 aa7.87□□□□□ -1.15
DDI3YNL335W YMR196WQ04336 1088 aa7.86□□□□□ -1.15
DDI3YNL335W NMA111P53920 997 aa7.85□□□□□ -1.15
DDI3YNL335W SAP30P38429 201 aa7.84□□□□□ -1.15
DDI3YNL335W BRL1P38770 471 aa7.84□□□□□ -1.15
DDI3YNL335W NIS1P53939 407 aa7.84□□□□□ -1.15
DDI3YNL335W YRR1Q12172 810 aa7.84□□□□□ -1.15
DDI3YNL335W FPK1P53739 893 aa7.82□□□□□ -1.16
DDI3YNL335W TFB3Q03290 321 aa7.82□□□□□ -1.16
DDI3YNL335W AIR2Q12476 344 aaKnown RBP7.81□□□□□ -1.16
DDI3YNL335W GLN1P32288 370 aaKnown RBP7.8□□□□□ -1.16
DDI3YNL335W HST2P53686 357 aa7.8□□□□□ -1.16
DDI3YNL335W HAP5Q02516 242 aa7.8□□□□□ -1.16
DDI3YNL335W ARH1P48360 493 aa7.79□□□□□ -1.16
DDI3YNL335W TYW1Q08960 810 aaKnown RBP7.79□□□□□ -1.16
DDI3YNL335W MMP1Q12372 583 aa7.78□□□□□ -1.16
DDI3YNL335W SIS1P25294 352 aaKnown RBP7.77□□□□□ -1.17
DDI3YNL335W KTR1P27810 393 aaKnown RBP7.77□□□□□ -1.17
DDI3YNL335W RLF2Q12495 606 aa7.77□□□□□ -1.17
DDI3YNL335W SIT4P20604 311 aa7.76□□□□□ -1.17
DDI3YNL335W ELP4Q02884 456 aaKnown RBP7.75□□□□□ -1.17
DDI3YNL335W NUD1P32336 851 aa7.74□□□□□ -1.17
DDI3YNL335W NPL4P33755 580 aa7.74□□□□□ -1.17
DDI3YNL335W YJL171CP46992 396 aa7.74□□□□□ -1.17
DDI3YNL335W ESS1P22696 170 aa7.73□□□□□ -1.17
DDI3YNL335W SCJ1P25303 377 aa7.73□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 57 ms