RNA–Protein interactions for RNA: YNL335W

DDI3, Transcript of Protein of unknown function, yeastyeast

Gene DDI3, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDI3YNL335W DRS1P32892 752 aaKnown RBP13.84□□□□□ -0.19
DDI3YNL335W MTC1P47018 478 aaKnown RBP13.66□□□□□ -0.22
DDI3YNL335W BFR2Q06631 534 aaKnown RBP12.02□□□□□ -0.49
DDI3YNL335W DIP2Q12220 943 aaPredicted RBP11.75□□□□□ -0.53
DDI3YNL335W AVT3P36062 692 aa11.58□□□□□ -0.56
DDI3YNL335W TFA1P36100 482 aa11.35□□□□□ -0.59
DDI3YNL335W FAP1P53971 965 aa11.14□□□□□ -0.63
DDI3YNL335W ISW2Q08773 1120 aa11.13□□□□□ -0.63
DDI3YNL335W RSE1Q04693 1361 aaKnown RBP11.07□□□□□ -0.64
DDI3YNL335W RPG1P38249 964 aaKnown RBP10.95□□□□□ -0.66
DDI3YNL335W PRI1P10363 409 aa10.91□□□□□ -0.66
DDI3YNL335W AAD16Q02895 342 aa10.73□□□□□ -0.69
DDI3YNL335W RPL17AP05740 184 aaKnown RBP10.64□□□□□ -0.71
DDI3YNL335W RPL17BP46990 184 aaKnown RBP10.64□□□□□ -0.71
DDI3YNL335W REB1P21538 810 aa10.52□□□□□ -0.73
DDI3YNL335W PRY3P47033 881 aa10.4□□□□□ -0.74
DDI3YNL335W TSR3Q12094 313 aaKnown RBP10.38□□□□□ -0.75
DDI3YNL335W SPT21P35209 758 aa10.22□□□□□ -0.77
DDI3YNL335W RIM101P33400 625 aa10.11□□□□□ -0.79
DDI3YNL335W MRPL32P25348 183 aa10□□□□□ -0.81
DDI3YNL335W YKR023WP36119 530 aaKnown RBP9.87□□□□□ -0.83
DDI3YNL335W PTP3P40048 928 aa9.85□□□□□ -0.83
DDI3YNL335W HAA1Q12753 694 aaKnown RBP9.83□□□□□ -0.84
DDI3YNL335W RQC2Q12532 1038 aaKnown RBP9.82□□□□□ -0.84
DDI3YNL335W OXP1P28273 1286 aa9.79□□□□□ -0.84
DDI3YNL335W YCK3P39962 524 aa9.75□□□□□ -0.85
DDI3YNL335W SSP1P38871 571 aa9.72□□□□□ -0.85
DDI3YNL335W YIL055CP40523 627 aaKnown RBP9.72□□□□□ -0.85
DDI3YNL335W YAH1Q12184 172 aaKnown RBP9.7□□□□□ -0.86
DDI3YNL335W HOP09932 586 aa9.69□□□□□ -0.86
DDI3YNL335W TFC8Q12308 588 aa9.68□□□□□ -0.86
DDI3YNL335W CDC27P38042 758 aa9.64□□□□□ -0.87
DDI3YNL335W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.61□□□□□ -0.87not detected
DDI3YNL335W DCD1P06773 312 aa9.6□□□□□ -0.87
DDI3YNL335W YLR271WQ06152 274 aa9.55□□□□□ -0.88
DDI3YNL335W RSM7P47150 247 aa9.53□□□□□ -0.88
DDI3YNL335W BCH2P36122 765 aa9.4□□□□□ -0.9
DDI3YNL335W DMA1P38823 416 aa9.39□□□□□ -0.91
DDI3YNL335W MGA2P40578 1113 aa9.39□□□□□ -0.91
DDI3YNL335W AI2P03876 854 aa9.36□□□□□ -0.91
DDI3YNL335W BBC1P47068 1157 aa9.34□□□□□ -0.91
DDI3YNL335W YGL015CP33199 130 aa9.29□□□□□ -0.92
DDI3YNL335W PSD2P53037 1138 aaKnown RBP9.29□□□□□ -0.92
DDI3YNL335W EPS1P40557 701 aa9.26□□□□□ -0.93
DDI3YNL335W UBP10P53874 792 aaPredicted RBP9.26□□□□□ -0.93
DDI3YNL335W CST9Q06032 482 aa9.26□□□□□ -0.93
DDI3YNL335W SCY1P53009 804 aa9.25□□□□□ -0.93
DDI3YNL335W MAP2P38174 421 aaKnown RBP9.23□□□□□ -0.93
DDI3YNL335W BDF1P35817 686 aa9.18□□□□□ -0.94
DDI3YNL335W MRM1P25270 412 aa9.08□□□□□ -0.96
DDI3YNL335W SLX5P32828 619 aaKnown RBP9.08□□□□□ -0.96
DDI3YNL335W RTG3P38165 486 aa8.98□□□□□ -0.97
DDI3YNL335W RAM2P29703 316 aa8.93□□□□□ -0.98
DDI3YNL335W RCR1P38212 213 aa8.93□□□□□ -0.98
DDI3YNL335W TIF4632P39936 914 aaKnown RBP8.92□□□□□ -0.98
DDI3YNL335W SAS10Q12136 610 aaPredicted RBP8.84□□□□□ -0.99
DDI3YNL335W VPS29P38759 282 aa8.83□□□□□ -1
DDI3YNL335W MAK11P20484 414 aaKnown RBP8.82□□□□□ -1
DDI3YNL335W TGL3P40308 642 aa8.81□□□□□ -1
DDI3YNL335W YMR1P47147 688 aaKnown RBP RIP-Chip data8.8□□□□□ -1not detected
DDI3YNL335W SET1P38827 1080 aaKnown RBP8.79□□□□□ -1
DDI3YNL335W NSR1P27476 414 aaKnown RBP RIP-Chip data8.75□□□□□ -1.01not detected
DDI3YNL335W YOR238WQ08634 303 aa8.74□□□□□ -1.01
DDI3YNL335W DBP1P24784 617 aaKnown RBP8.72□□□□□ -1.01
DDI3YNL335W YAP5P40574 245 aa8.72□□□□□ -1.01
DDI3YNL335W STS1P38637 319 aa8.71□□□□□ -1.02
DDI3YNL335W IFH1P39520 1085 aa8.71□□□□□ -1.02
DDI3YNL335W COQ8P27697 501 aa8.69□□□□□ -1.02
DDI3YNL335W YFR006WP43590 535 aa8.69□□□□□ -1.02
DDI3YNL335W MIF2P35201 549 aa8.66□□□□□ -1.02
DDI3YNL335W YPR148CQ06523 435 aa8.66□□□□□ -1.02
DDI3YNL335W VPS70P47161 811 aa8.64□□□□□ -1.03
DDI3YNL335W PIB1Q06651 286 aa8.63□□□□□ -1.03
DDI3YNL335W NOP53Q12080 455 aaKnown RBP8.63□□□□□ -1.03
DDI3YNL335W CKB1P43639 278 aa8.62□□□□□ -1.03
DDI3YNL335W LEU3P08638 886 aa8.6□□□□□ -1.03
DDI3YNL335W EDS1P38073 919 aa8.58□□□□□ -1.04
DDI3YNL335W VMA1P17255 1071 aaKnown RBP8.55□□□□□ -1.04
DDI3YNL335W LEO1P38439 464 aa8.55□□□□□ -1.04
DDI3YNL335W MST1P07236 462 aa8.54□□□□□ -1.04
DDI3YNL335W SPB4P25808 606 aaPredicted RBP8.54□□□□□ -1.04
DDI3YNL335W PTC3P34221 468 aaKnown RBP8.53□□□□□ -1.04
DDI3YNL335W GTT3P39996 337 aa8.52□□□□□ -1.05
DDI3YNL335W GRE2Q12068 342 aaKnown RBP8.46□□□□□ -1.06
DDI3YNL335W ATH1P48016 1211 aa8.45□□□□□ -1.06
DDI3YNL335W SAM3Q08986 587 aa8.45□□□□□ -1.06
DDI3YNL335W PBS2P08018 668 aa8.44□□□□□ -1.06
DDI3YNL335W REF2P42073 533 aaPredicted RBP8.43□□□□□ -1.06
DDI3YNL335W GYP5Q12344 894 aa8.42□□□□□ -1.06
DDI3YNL335W GUT1P32190 709 aa8.41□□□□□ -1.06
DDI3YNL335W DSF2P38213 736 aa8.41□□□□□ -1.06
DDI3YNL335W RPN1P38764 993 aaKnown RBP8.37□□□□□ -1.07
DDI3YNL335W ABP1P15891 592 aaKnown RBP8.36□□□□□ -1.07
DDI3YNL335W YOL036WQ08206 761 aa8.36□□□□□ -1.07
DDI3YNL335W MAM3Q12296 706 aa8.35□□□□□ -1.07
DDI3YNL335W SET4P42948 560 aa8.34□□□□□ -1.07
DDI3YNL335W MAK21Q12176 1025 aaKnown RBP8.34□□□□□ -1.07
DDI3YNL335W MSB4Q12317 492 aa8.33□□□□□ -1.08
DDI3YNL335W DCW1P36091 449 aa8.32□□□□□ -1.08
DDI3YNL335W WSC3Q12215 556 aa8.32□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms