RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C DIT2P21595 489 aa8.32□□□□□ -1.08
CUS1YMR240C GLC3P32775 704 aa8.31□□□□□ -1.08
CUS1YMR240C UBP14P38237 781 aaKnown RBP8.31□□□□□ -1.08
CUS1YMR240C VHR2P40041 505 aa8.3□□□□□ -1.08
CUS1YMR240C GYP5Q12344 894 aa8.3□□□□□ -1.08
CUS1YMR240C GTT3P39996 337 aa8.29□□□□□ -1.08
CUS1YMR240C YDR090CQ03193 310 aa8.29□□□□□ -1.08
CUS1YMR240C YGR273CP53329 174 aa8.29□□□□□ -1.08
CUS1YMR240C YLR326WQ06170 240 aaKnown RBP8.28□□□□□ -1.08
CUS1YMR240C ABP1P15891 592 aaKnown RBP8.26□□□□□ -1.09
CUS1YMR240C SOL3P38858 249 aa8.25□□□□□ -1.09
CUS1YMR240C KIC1P38692 1080 aa8.24□□□□□ -1.09
CUS1YMR240C ATF2P53296 535 aa8.23□□□□□ -1.09
CUS1YMR240C YOL036WQ08206 761 aa8.23□□□□□ -1.09
CUS1YMR240C KEX1P09620 729 aa8.21□□□□□ -1.1
CUS1YMR240C RAD54P32863 898 aa8.21□□□□□ -1.1
CUS1YMR240C DCW1P36091 449 aa8.2□□□□□ -1.1
CUS1YMR240C NST1P53935 1240 aa8.2□□□□□ -1.1
CUS1YMR240C PCS60P38137 543 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
CUS1YMR240C MSB4Q12317 492 aa8.19□□□□□ -1.1
CUS1YMR240C HGH1P48362 394 aaKnown RBP8.18□□□□□ -1.1
CUS1YMR240C HTA1P04911 132 aaKnown RBP8.17□□□□□ -1.1
CUS1YMR240C HTA2P04912 132 aa8.17□□□□□ -1.1
CUS1YMR240C PSE1P32337 1089 aaKnown RBP8.17□□□□□ -1.1
CUS1YMR240C SET4P42948 560 aa8.17□□□□□ -1.1
CUS1YMR240C RLF2Q12495 606 aa8.15□□□□□ -1.1
CUS1YMR240C MPH3P0CE00 602 aa8.14□□□□□ -1.11
CUS1YMR240C GUA1P38625 525 aaKnown RBP8.14□□□□□ -1.11
CUS1YMR240C AI4P03878 556 aa8.13□□□□□ -1.11
CUS1YMR240C ORC6P38826 435 aa8.11□□□□□ -1.11
CUS1YMR240C HPC2Q01448 625 aa8.11□□□□□ -1.11
CUS1YMR240C EAP1P36041 632 aaKnown RBP8.09□□□□□ -1.11
CUS1YMR240C ILV3P39522 585 aaKnown RBP8.08□□□□□ -1.12
CUS1YMR240C WSC3Q12215 556 aa8.07□□□□□ -1.12
CUS1YMR240C YEL023CP39992 682 aa8.06□□□□□ -1.12
CUS1YMR240C DAN4P47179 1161 aa8.04□□□□□ -1.12
CUS1YMR240C SSA2P10592 639 aaKnown RBP8.03□□□□□ -1.12
CUS1YMR240C RGR1P19263 1082 aa8.03□□□□□ -1.12
CUS1YMR240C PTC4P38089 393 aa8.03□□□□□ -1.12
CUS1YMR240C SLI15P38283 698 aa8.03□□□□□ -1.12
CUS1YMR240C TEA1P47988 759 aa8.03□□□□□ -1.12
CUS1YMR240C TRP5P00931 707 aaKnown RBP8.02□□□□□ -1.13
CUS1YMR240C RPP1BP10622 106 aaKnown RBP8.02□□□□□ -1.13
CUS1YMR240C GAP1P19145 602 aaPredicted RBP8.02□□□□□ -1.13
CUS1YMR240C CLB5P30283 435 aa8.02□□□□□ -1.13
CUS1YMR240C CSN12P47130 423 aa8.02□□□□□ -1.13
CUS1YMR240C MVP1P40959 511 aaKnown RBP8.01□□□□□ -1.13
CUS1YMR240C VNX1P42839 908 aa8.01□□□□□ -1.13
CUS1YMR240C JIP4Q03361 876 aa8.01□□□□□ -1.13
CUS1YMR240C CSC1Q06538 782 aa8.01□□□□□ -1.13
CUS1YMR240C TFB3Q03290 321 aa8□□□□□ -1.13
CUS1YMR240C BRL1P38770 471 aa7.99□□□□□ -1.13
CUS1YMR240C YBL029C-AQ3E756 94 aa7.99□□□□□ -1.13
CUS1YMR240C TIF11P38912 153 aaKnown RBP7.98□□□□□ -1.13
CUS1YMR240C ULI1P43604 169 aa7.97□□□□□ -1.13
CUS1YMR240C TFB4Q12004 338 aa7.96□□□□□ -1.14
CUS1YMR240C CDC73Q06697 393 aa7.94□□□□□ -1.14
CUS1YMR240C KTR1P27810 393 aaKnown RBP7.93□□□□□ -1.14
CUS1YMR240C UBP9P39967 754 aa7.93□□□□□ -1.14
CUS1YMR240C SPP1Q03012 353 aa7.93□□□□□ -1.14
CUS1YMR240C YPR109WQ06104 294 aa7.93□□□□□ -1.14
CUS1YMR240C IOC2Q12072 812 aa7.92□□□□□ -1.14
CUS1YMR240C PKC1P24583 1151 aa7.91□□□□□ -1.14
CUS1YMR240C NIS1P53939 407 aa7.91□□□□□ -1.14
CUS1YMR240C YNL035CP53962 389 aaKnown RBP7.91□□□□□ -1.14
CUS1YMR240C PEX21P50091 288 aa7.9□□□□□ -1.14
CUS1YMR240C HST2P53686 357 aa7.9□□□□□ -1.14
CUS1YMR240C GLN1P32288 370 aaKnown RBP7.89□□□□□ -1.15
CUS1YMR240C FPK1P53739 893 aa7.89□□□□□ -1.15
CUS1YMR240C TYW1Q08960 810 aaKnown RBP7.89□□□□□ -1.15
CUS1YMR240C YMR196WQ04336 1088 aa7.88□□□□□ -1.15
CUS1YMR240C DPL1Q05567 589 aa7.88□□□□□ -1.15
CUS1YMR240C PML39Q03760 334 aa7.87□□□□□ -1.15
CUS1YMR240C SIT4P20604 311 aa7.86□□□□□ -1.15
CUS1YMR240C SEC61P32915 480 aa7.85□□□□□ -1.15
CUS1YMR240C MID1P41821 548 aa7.85□□□□□ -1.15
CUS1YMR240C TUM1Q08686 304 aaKnown RBP7.85□□□□□ -1.15
CUS1YMR240C MMP1Q12372 583 aa7.85□□□□□ -1.15
CUS1YMR240C MPC54Q08550 464 aa7.84□□□□□ -1.15
CUS1YMR240C RTG1P32607 177 aa7.83□□□□□ -1.16
CUS1YMR240C BIM1P40013 344 aa7.83□□□□□ -1.16
CUS1YMR240C YJL007CP47080 104 aa7.82□□□□□ -1.16
CUS1YMR240C ISU2Q12056 156 aa7.82□□□□□ -1.16
CUS1YMR240C LDB19Q12502 818 aa7.81□□□□□ -1.16
CUS1YMR240C ESS1P22696 170 aa7.8□□□□□ -1.16
CUS1YMR240C YBL036CP38197 257 aa7.8□□□□□ -1.16
CUS1YMR240C PKH3Q03306 898 aaPredicted RBP7.8□□□□□ -1.16
CUS1YMR240C YRR1Q12172 810 aa7.8□□□□□ -1.16
CUS1YMR240C SCJ1P25303 377 aa7.79□□□□□ -1.16
CUS1YMR240C CSE4P36012 229 aa7.79□□□□□ -1.16
CUS1YMR240C PEX29Q03370 554 aa7.79□□□□□ -1.16
CUS1YMR240C RAD59Q12223 238 aa7.79□□□□□ -1.16
CUS1YMR240C ATG32P40458 529 aa7.78□□□□□ -1.16
CUS1YMR240C TFG1P41895 735 aaPredicted RBP7.78□□□□□ -1.16
CUS1YMR240C RTF1P53064 558 aa7.78□□□□□ -1.16
CUS1YMR240C NMA111P53920 997 aa7.78□□□□□ -1.16
CUS1YMR240C YJU3P28321 313 aa7.76□□□□□ -1.17
CUS1YMR240C YNL115CP53925 644 aa7.76□□□□□ -1.17
CUS1YMR240C NCR1Q12200 1170 aa7.76□□□□□ -1.17
CUS1YMR240C RPL34BP40525 121 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms