RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C DRS1P32892 752 aaKnown RBP13.78□□□□□ -0.2
CUS1YMR240C MTC1P47018 478 aaKnown RBP13.42□□□□□ -0.26
CUS1YMR240C BFR2Q06631 534 aaKnown RBP12.07□□□□□ -0.48
CUS1YMR240C DIP2Q12220 943 aaPredicted RBP11.63□□□□□ -0.55
CUS1YMR240C TFA1P36100 482 aa11.62□□□□□ -0.55
CUS1YMR240C AVT3P36062 692 aa11.59□□□□□ -0.55
CUS1YMR240C RSE1Q04693 1361 aaKnown RBP10.9□□□□□ -0.66
CUS1YMR240C ISW2Q08773 1120 aa10.85□□□□□ -0.67
CUS1YMR240C RPG1P38249 964 aaKnown RBP10.67□□□□□ -0.7
CUS1YMR240C PRI1P10363 409 aa10.59□□□□□ -0.71
CUS1YMR240C FAP1P53971 965 aa10.58□□□□□ -0.71
CUS1YMR240C RPL17AP05740 184 aaKnown RBP10.46□□□□□ -0.73
CUS1YMR240C RPL17BP46990 184 aaKnown RBP10.46□□□□□ -0.73
CUS1YMR240C AAD16Q02895 342 aa10.37□□□□□ -0.75
CUS1YMR240C REB1P21538 810 aa10.3□□□□□ -0.76
CUS1YMR240C RQC2Q12532 1038 aaKnown RBP10.21□□□□□ -0.78
CUS1YMR240C SPT21P35209 758 aa10.12□□□□□ -0.79
CUS1YMR240C RIM101P33400 625 aa10.07□□□□□ -0.8
CUS1YMR240C TSR3Q12094 313 aaKnown RBP10.06□□□□□ -0.8
CUS1YMR240C PRY3P47033 881 aa9.89□□□□□ -0.83
CUS1YMR240C PTP3P40048 928 aa9.86□□□□□ -0.83
CUS1YMR240C SSP1P38871 571 aa9.76□□□□□ -0.85
CUS1YMR240C OXP1P28273 1286 aa9.75□□□□□ -0.85
CUS1YMR240C YKR023WP36119 530 aaKnown RBP9.71□□□□□ -0.86
CUS1YMR240C MRPL32P25348 183 aa9.69□□□□□ -0.86
CUS1YMR240C DMA1P38823 416 aa9.66□□□□□ -0.86
CUS1YMR240C YIL055CP40523 627 aaKnown RBP9.6□□□□□ -0.87
CUS1YMR240C YAH1Q12184 172 aaKnown RBP9.6□□□□□ -0.87
CUS1YMR240C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.57□□□□□ -0.88not detected
CUS1YMR240C YLR271WQ06152 274 aa9.54□□□□□ -0.88
CUS1YMR240C TFC8Q12308 588 aa9.53□□□□□ -0.88
CUS1YMR240C HOP09932 586 aa9.48□□□□□ -0.89
CUS1YMR240C RSM7P47150 247 aa9.47□□□□□ -0.89
CUS1YMR240C HAA1Q12753 694 aaKnown RBP9.42□□□□□ -0.9
CUS1YMR240C CDC27P38042 758 aa9.41□□□□□ -0.9
CUS1YMR240C YCK3P39962 524 aa9.41□□□□□ -0.9
CUS1YMR240C MGA2P40578 1113 aa9.38□□□□□ -0.91
CUS1YMR240C DCD1P06773 312 aa9.37□□□□□ -0.91
CUS1YMR240C AI2P03876 854 aa9.28□□□□□ -0.92
CUS1YMR240C PSD2P53037 1138 aaKnown RBP9.26□□□□□ -0.93
CUS1YMR240C BCH2P36122 765 aa9.25□□□□□ -0.93
CUS1YMR240C CST9Q06032 482 aa9.24□□□□□ -0.93
CUS1YMR240C BBC1P47068 1157 aa9.2□□□□□ -0.94
CUS1YMR240C EPS1P40557 701 aa9.12□□□□□ -0.95
CUS1YMR240C SAS10Q12136 610 aaPredicted RBP9.1□□□□□ -0.95
CUS1YMR240C BDF1P35817 686 aa9.05□□□□□ -0.96
CUS1YMR240C UBP10P53874 792 aaPredicted RBP9.03□□□□□ -0.96
CUS1YMR240C SCY1P53009 804 aa9.02□□□□□ -0.97
CUS1YMR240C LEO1P38439 464 aa9□□□□□ -0.97
CUS1YMR240C MRM1P25270 412 aa8.99□□□□□ -0.97
CUS1YMR240C RAM2P29703 316 aa8.98□□□□□ -0.97
CUS1YMR240C MAP2P38174 421 aaKnown RBP8.98□□□□□ -0.97
CUS1YMR240C YGL015CP33199 130 aa8.95□□□□□ -0.98
CUS1YMR240C LEU3P08638 886 aa8.92□□□□□ -0.98
CUS1YMR240C RTG3P38165 486 aa8.91□□□□□ -0.98
CUS1YMR240C RCR1P38212 213 aa8.89□□□□□ -0.99
CUS1YMR240C SET1P38827 1080 aaKnown RBP8.86□□□□□ -0.99
CUS1YMR240C SLX5P32828 619 aaKnown RBP8.84□□□□□ -0.99
CUS1YMR240C TAF7Q05021 590 aa8.84□□□□□ -0.99
CUS1YMR240C MAK11P20484 414 aaKnown RBP8.82□□□□□ -1
CUS1YMR240C YPR148CQ06523 435 aa8.8□□□□□ -1
CUS1YMR240C IFH1P39520 1085 aa8.8□□□□□ -1
CUS1YMR240C VPS29P38759 282 aa8.79□□□□□ -1
CUS1YMR240C CKB1P43639 278 aa8.76□□□□□ -1.01
CUS1YMR240C VPS70P47161 811 aa8.73□□□□□ -1.01
CUS1YMR240C YMR1P47147 688 aaKnown RBP RIP-Chip data8.71□□□□□ -1.02not detected
CUS1YMR240C COQ8P27697 501 aa8.69□□□□□ -1.02
CUS1YMR240C NOP53Q12080 455 aaKnown RBP8.68□□□□□ -1.02
CUS1YMR240C SPB4P25808 606 aaPredicted RBP8.67□□□□□ -1.02
CUS1YMR240C RPN1P38764 993 aaKnown RBP8.66□□□□□ -1.02
CUS1YMR240C STS1P38637 319 aa8.64□□□□□ -1.03
CUS1YMR240C TIF4632P39936 914 aaKnown RBP8.64□□□□□ -1.03
CUS1YMR240C DBP1P24784 617 aaKnown RBP8.62□□□□□ -1.03
CUS1YMR240C NSR1P27476 414 aaKnown RBP RIP-Chip data8.62□□□□□ -1.03not detected
CUS1YMR240C YOR238WQ08634 303 aa8.6□□□□□ -1.03
CUS1YMR240C MIF2P35201 549 aa8.59□□□□□ -1.03
CUS1YMR240C TGL3P40308 642 aa8.59□□□□□ -1.03
CUS1YMR240C YFR006WP43590 535 aa8.58□□□□□ -1.04
CUS1YMR240C EDS1P38073 919 aa8.57□□□□□ -1.04
CUS1YMR240C DSF2P38213 736 aa8.56□□□□□ -1.04
CUS1YMR240C PBS2P08018 668 aa8.55□□□□□ -1.04
CUS1YMR240C YAP5P40574 245 aa8.54□□□□□ -1.04
CUS1YMR240C PTC3P34221 468 aaKnown RBP8.51□□□□□ -1.05
CUS1YMR240C REF2P42073 533 aaPredicted RBP8.51□□□□□ -1.05
CUS1YMR240C VMA1P17255 1071 aaKnown RBP8.45□□□□□ -1.06
CUS1YMR240C PIB1Q06651 286 aa8.45□□□□□ -1.06
CUS1YMR240C YNR021WP53723 404 aaKnown RBP8.44□□□□□ -1.06
CUS1YMR240C MAK21Q12176 1025 aaKnown RBP8.44□□□□□ -1.06
CUS1YMR240C MAM3Q12296 706 aa8.44□□□□□ -1.06
CUS1YMR240C COX6P00427 148 aa8.39□□□□□ -1.07
CUS1YMR240C MST1P07236 462 aa8.39□□□□□ -1.07
CUS1YMR240C IES2P40154 320 aa8.38□□□□□ -1.07
CUS1YMR240C SAM3Q08986 587 aa8.38□□□□□ -1.07
CUS1YMR240C GRE2Q12068 342 aaKnown RBP8.38□□□□□ -1.07
CUS1YMR240C ATH1P48016 1211 aa8.37□□□□□ -1.07
CUS1YMR240C DMA2P53924 522 aa8.37□□□□□ -1.07
CUS1YMR240C GUT1P32190 709 aa8.36□□□□□ -1.07
CUS1YMR240C NUP42P49686 430 aaKnown RBP8.35□□□□□ -1.07
CUS1YMR240C KIN1P13185 1064 aa8.34□□□□□ -1.07
CUS1YMR240C AIM7Q12156 149 aa8.34□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms