RNA–Protein interactions for RNA: YMR106C

YKU80, Transcript of Subunit of the telomeric Ku complex (Yku70p-Yku80p), yeastyeast

Gene YKU80, Length 1,890 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKU80YMR106C IOC2Q12072 812 aa3.82□□□□□ -1.8
YKU80YMR106C ABP1P15891 592 aaKnown RBP3.81□□□□□ -1.8
YKU80YMR106C HTA1P04911 132 aaKnown RBP3.8□□□□□ -1.8
YKU80YMR106C HTA2P04912 132 aa3.8□□□□□ -1.8
YKU80YMR106C SIS1P25294 352 aaKnown RBP3.8□□□□□ -1.8
YKU80YMR106C LDB19Q12502 818 aa3.79□□□□□ -1.8
YKU80YMR106C SPB4P25808 606 aaPredicted RBP3.79□□□□□ -1.8
YKU80YMR106C SOL3P38858 249 aa3.79□□□□□ -1.8
YKU80YMR106C LEU3P08638 886 aa3.78□□□□□ -1.8
YKU80YMR106C YEL023CP39992 682 aa3.78□□□□□ -1.8
YKU80YMR106C URN1Q06525 465 aaKnown RBP3.78□□□□□ -1.8
YKU80YMR106C NST1P53935 1240 aa3.77□□□□□ -1.81
YKU80YMR106C PTC4P38089 393 aa3.77□□□□□ -1.81
YKU80YMR106C LEO1P38439 464 aa3.77□□□□□ -1.81
YKU80YMR106C REF2P42073 533 aaPredicted RBP3.77□□□□□ -1.81
YKU80YMR106C DAN4P47179 1161 aa3.76□□□□□ -1.81
YKU80YMR106C YGR273CP53329 174 aa3.76□□□□□ -1.81
YKU80YMR106C RTG1P32607 177 aa3.75□□□□□ -1.81
YKU80YMR106C YNL035CP53962 389 aaKnown RBP3.75□□□□□ -1.81
YKU80YMR106C JIP4Q03361 876 aa3.75□□□□□ -1.81
YKU80YMR106C PBS2P08018 668 aa3.75□□□□□ -1.81
YKU80YMR106C FKH1P40466 484 aa3.75□□□□□ -1.81
YKU80YMR106C MAK21Q12176 1025 aaKnown RBP3.75□□□□□ -1.81
YKU80YMR106C AIR2Q12476 344 aaKnown RBP3.74□□□□□ -1.81
YKU80YMR106C SEC61P32915 480 aa3.73□□□□□ -1.81
YKU80YMR106C DSF2P38213 736 aa3.73□□□□□ -1.81
YKU80YMR106C UBP14P38237 781 aaKnown RBP3.73□□□□□ -1.81
YKU80YMR106C NCR1Q12200 1170 aa3.73□□□□□ -1.81
YKU80YMR106C MPH3P0CE00 602 aa3.73□□□□□ -1.81
YKU80YMR106C VHR2P40041 505 aa3.73□□□□□ -1.81
YKU80YMR106C COX6P00427 148 aa3.72□□□□□ -1.81
YKU80YMR106C AI4P03878 556 aa3.72□□□□□ -1.81
YKU80YMR106C ILV3P39522 585 aaKnown RBP3.72□□□□□ -1.81
YKU80YMR106C KEX1P09620 729 aa3.71□□□□□ -1.82
YKU80YMR106C YLR326WQ06170 240 aaKnown RBP3.71□□□□□ -1.82
YKU80YMR106C MAM3Q12296 706 aa3.71□□□□□ -1.82
YKU80YMR106C KIC1P38692 1080 aa3.71□□□□□ -1.82
YKU80YMR106C RPN1P38764 993 aaKnown RBP3.71□□□□□ -1.82
YKU80YMR106C YDR090CQ03193 310 aa3.7□□□□□ -1.82
YKU80YMR106C PML39Q03760 334 aa3.7□□□□□ -1.82
YKU80YMR106C TFG1P41895 735 aaPredicted RBP3.69□□□□□ -1.82
YKU80YMR106C PCS60P38137 543 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82 RIP-Chip
YKU80YMR106C MID1P41821 548 aa3.69□□□□□ -1.82
YKU80YMR106C RAD54P32863 898 aa3.68□□□□□ -1.82
YKU80YMR106C SLI15P38283 698 aa3.68□□□□□ -1.82
YKU80YMR106C YJL171CP46992 396 aa3.68□□□□□ -1.82
YKU80YMR106C YDL129WQ07555 291 aa3.68□□□□□ -1.82
YKU80YMR106C SAP30P38429 201 aa3.67□□□□□ -1.82
YKU80YMR106C YNR021WP53723 404 aaKnown RBP3.67□□□□□ -1.82
YKU80YMR106C BMT6Q12291 365 aa3.67□□□□□ -1.82
YKU80YMR106C RPP1BP10622 106 aaKnown RBP3.66□□□□□ -1.82
YKU80YMR106C IES2P40154 320 aa3.66□□□□□ -1.82
YKU80YMR106C RGA2Q06407 1009 aa3.65□□□□□ -1.82
YKU80YMR106C NAP1P25293 417 aaKnown RBP3.64□□□□□ -1.83
YKU80YMR106C NUP42P49686 430 aaKnown RBP3.64□□□□□ -1.83
YKU80YMR106C YDR344CQ05510 147 aa3.64□□□□□ -1.83
YKU80YMR106C PEX29Q03370 554 aa3.63□□□□□ -1.83
YKU80YMR106C CDC73Q06697 393 aa3.63□□□□□ -1.83
YKU80YMR106C MPC54Q08550 464 aa3.63□□□□□ -1.83
YKU80YMR106C DIT2P21595 489 aa3.62□□□□□ -1.83
YKU80YMR106C AIM7Q12156 149 aa3.62□□□□□ -1.83
YKU80YMR106C PSE1P32337 1089 aaKnown RBP3.62□□□□□ -1.83
YKU80YMR106C ATF2P53296 535 aa3.62□□□□□ -1.83
YKU80YMR106C DPL1Q05567 589 aa3.62□□□□□ -1.83
YKU80YMR106C ORC6P38826 435 aa3.6□□□□□ -1.83
YKU80YMR106C NMA111P53920 997 aa3.6□□□□□ -1.83
YKU80YMR106C ARH1P48360 493 aa3.6□□□□□ -1.83
YKU80YMR106C CSC1Q06538 782 aa3.6□□□□□ -1.83
YKU80YMR106C GAP1P19145 602 aaPredicted RBP3.59□□□□□ -1.83
YKU80YMR106C GLC3P32775 704 aa3.59□□□□□ -1.83
YKU80YMR106C ELP4Q02884 456 aaKnown RBP3.59□□□□□ -1.83
YKU80YMR106C IOC4Q04213 475 aa3.59□□□□□ -1.83
YKU80YMR106C AIM44Q99299 758 aa3.59□□□□□ -1.83
YKU80YMR106C KIN1P13185 1064 aa3.58□□□□□ -1.84
YKU80YMR106C PRE3P38624 215 aa3.58□□□□□ -1.84
YKU80YMR106C PEX21P50091 288 aa3.58□□□□□ -1.84
YKU80YMR106C HAP5Q02516 242 aa3.58□□□□□ -1.84
YKU80YMR106C CHL1P22516 861 aaPredicted RBP3.58□□□□□ -1.84
YKU80YMR106C CLB5P30283 435 aa3.58□□□□□ -1.84
YKU80YMR106C TFB4Q12004 338 aa3.58□□□□□ -1.84
YKU80YMR106C ISU2Q12056 156 aa3.58□□□□□ -1.84
YKU80YMR106C RGR1P19263 1082 aa3.57□□□□□ -1.84
YKU80YMR106C MVP1P40959 511 aaKnown RBP3.57□□□□□ -1.84
YKU80YMR106C TEA1P47988 759 aa3.57□□□□□ -1.84
YKU80YMR106C YRB30P53107 440 aaPredicted RBP3.56□□□□□ -1.84
YKU80YMR106C SPT23P35210 1082 aa3.55□□□□□ -1.84
YKU80YMR106C HGH1P48362 394 aaKnown RBP3.55□□□□□ -1.84
YKU80YMR106C BNI4P53858 892 aa3.55□□□□□ -1.84
YKU80YMR106C TUM1Q08686 304 aaKnown RBP3.55□□□□□ -1.84
YKU80YMR106C YPR109WQ06104 294 aa3.54□□□□□ -1.84
YKU80YMR106C YRR1Q12172 810 aa3.54□□□□□ -1.84
YKU80YMR106C PDR1P12383 1068 aa3.54□□□□□ -1.84
YKU80YMR106C SSA2P10592 639 aaKnown RBP3.52□□□□□ -1.85
YKU80YMR106C RAM1P22007 431 aa3.52□□□□□ -1.85
YKU80YMR106C PTC2P39966 464 aaKnown RBP3.52□□□□□ -1.85
YKU80YMR106C YML082WQ04533 649 aaKnown RBP3.52□□□□□ -1.85
YKU80YMR106C YPR015CQ12531 247 aa3.52□□□□□ -1.85
YKU80YMR106C CSN12P47130 423 aa3.51□□□□□ -1.85
YKU80YMR106C VRP1P37370 817 aa3.5□□□□□ -1.85
YKU80YMR106C YMR196WQ04336 1088 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms