RNA–Protein interactions for RNA: YMR104C

YPK2, Transcript of Protein kinase similar to serine/threonine protein kinase Ypk1p, yeastyeast

Gene YPK2, Length 2,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPK2YMR104C ULS1Q08562 1619 aa8.37□□□□□ -1.07
YPK2YMR104C LEU3P08638 886 aa8.37□□□□□ -1.07
YPK2YMR104C ESC1Q03661 1658 aaKnown RBP8.34□□□□□ -1.07
YPK2YMR104C SNT2P53127 1403 aa8.32□□□□□ -1.08
YPK2YMR104C TY1B-JR2P47100 1755 aaKnown RBP8.32□□□□□ -1.08
YPK2YMR104C TY1B-ER2Q03619 1755 aa8.32□□□□□ -1.08
YPK2YMR104C TY1B-MR1Q04214 1755 aa8.32□□□□□ -1.08
YPK2YMR104C TY1B-MR2Q04670 1755 aaKnown RBP8.32□□□□□ -1.08
YPK2YMR104C TY1B-LR1Q12088 1755 aaKnown RBP8.32□□□□□ -1.08
YPK2YMR104C TY1B-NL1Q12112 1755 aa8.32□□□□□ -1.08
YPK2YMR104C TY1B-GR1Q12141 1755 aa8.32□□□□□ -1.08
YPK2YMR104C TY1B-BLQ12490 1755 aa8.32□□□□□ -1.08
YPK2YMR104C NUP170P38181 1502 aa8.31□□□□□ -1.08
YPK2YMR104C RTT106P40161 455 aa8.3□□□□□ -1.08
YPK2YMR104C RPA190P10964 1664 aaKnown RBP8.28□□□□□ -1.08
YPK2YMR104C NTE1Q04958 1679 aa8.28□□□□□ -1.08
YPK2YMR104C GEA2P39993 1459 aaKnown RBP8.27□□□□□ -1.09
YPK2YMR104C SSM4P40318 1319 aa8.27□□□□□ -1.09
YPK2YMR104C DNF1P32660 1571 aa8.27□□□□□ -1.09
YPK2YMR104C RPO21P04050 1733 aaKnown RBP8.25□□□□□ -1.09
YPK2YMR104C TY3B-GQ99315 1547 aa8.25□□□□□ -1.09
YPK2YMR104C SSP1P38871 571 aa8.24□□□□□ -1.09
YPK2YMR104C CAT8P39113 1433 aa8.22□□□□□ -1.09
YPK2YMR104C RPL17AP05740 184 aaKnown RBP8.22□□□□□ -1.09
YPK2YMR104C RPL17BP46990 184 aaKnown RBP8.22□□□□□ -1.09
YPK2YMR104C RIM101P33400 625 aa8.22□□□□□ -1.09
YPK2YMR104C IRC20Q06554 1556 aa8.22□□□□□ -1.09
YPK2YMR104C NUP159P40477 1460 aa8.21□□□□□ -1.09
YPK2YMR104C VPS15P22219 1454 aa8.21□□□□□ -1.1
YPK2YMR104C YBT1P32386 1661 aa8.21□□□□□ -1.1
YPK2YMR104C ABP1P15891 592 aaKnown RBP8.18□□□□□ -1.1
YPK2YMR104C ISW2Q08773 1120 aa8.17□□□□□ -1.1
YPK2YMR104C SPT21P35209 758 aa8.15□□□□□ -1.1
YPK2YMR104C DMA2P53924 522 aa8.15□□□□□ -1.1
YPK2YMR104C MET10P39692 1035 aa8.15□□□□□ -1.11
YPK2YMR104C MET5P47169 1442 aa8.13□□□□□ -1.11
YPK2YMR104C PDR12Q02785 1511 aa8.13□□□□□ -1.11
YPK2YMR104C SRB8P25648 1427 aa8.12□□□□□ -1.11
YPK2YMR104C RPG1P38249 964 aaKnown RBP8.12□□□□□ -1.11
YPK2YMR104C PDR10P51533 1564 aa8.11□□□□□ -1.11
YPK2YMR104C ARO1P08566 1588 aaKnown RBP8.11□□□□□ -1.11
YPK2YMR104C CKB1P43639 278 aa8.1□□□□□ -1.11
YPK2YMR104C GDB1Q06625 1536 aa8.1□□□□□ -1.11
YPK2YMR104C NUP157P40064 1391 aaKnown RBP8.1□□□□□ -1.11
YPK2YMR104C SPO14P36126 1683 aa8.09□□□□□ -1.11
YPK2YMR104C YRF1-1P0CX20 1796 aa8.08□□□□□ -1.12
YPK2YMR104C YRF1-5P0CX21 1796 aa8.08□□□□□ -1.12
YPK2YMR104C YRF1-8P0CX22 1796 aa8.08□□□□□ -1.12
YPK2YMR104C OXP1P28273 1286 aa8.04□□□□□ -1.12
YPK2YMR104C BUD21Q08492 214 aaPredicted RBP8.03□□□□□ -1.12
YPK2YMR104C MMS1Q06211 1407 aa8.03□□□□□ -1.12
YPK2YMR104C GCN2P15442 1659 aa8.02□□□□□ -1.13
YPK2YMR104C BUD3P25558 1636 aa8.01□□□□□ -1.13
YPK2YMR104C IQG1Q12280 1495 aa8□□□□□ -1.13
YPK2YMR104C RPN1P38764 993 aaKnown RBP8□□□□□ -1.13
YPK2YMR104C POL5P39985 1022 aaKnown RBP8□□□□□ -1.13
YPK2YMR104C YSP2Q06681 1438 aa7.99□□□□□ -1.13
YPK2YMR104C YLR271WQ06152 274 aa7.98□□□□□ -1.13
YPK2YMR104C NOP7P53261 605 aaKnown RBP7.96□□□□□ -1.13
YPK2YMR104C REB1P21538 810 aa7.96□□□□□ -1.14
YPK2YMR104C FAP1P53971 965 aa7.95□□□□□ -1.14
YPK2YMR104C BNR1P40450 1375 aa7.94□□□□□ -1.14
YPK2YMR104C LTE1P07866 1435 aa7.93□□□□□ -1.14
YPK2YMR104C PAF1P38351 445 aa7.93□□□□□ -1.14
YPK2YMR104C RLF2Q12495 606 aa7.92□□□□□ -1.14
YPK2YMR104C YAH1Q12184 172 aaKnown RBP7.91□□□□□ -1.14
YPK2YMR104C SEC7P11075 2009 aaKnown RBP7.91□□□□□ -1.14
YPK2YMR104C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.89□□□□□ -1.15not detected
YPK2YMR104C TRM3Q07527 1436 aa7.89□□□□□ -1.15
YPK2YMR104C YOR093CQ12275 1648 aa7.88□□□□□ -1.15
YPK2YMR104C PDR5P33302 1511 aaKnown RBP7.88□□□□□ -1.15
YPK2YMR104C DRS2P39524 1355 aa7.87□□□□□ -1.15
YPK2YMR104C DOP1Q03921 1698 aa7.86□□□□□ -1.15
YPK2YMR104C CHC1P22137 1653 aaKnown RBP7.86□□□□□ -1.15
YPK2YMR104C PRI1P10363 409 aa7.86□□□□□ -1.15
YPK2YMR104C SEC3P33332 1336 aaKnown RBP7.85□□□□□ -1.15
YPK2YMR104C MGA2P40578 1113 aa7.85□□□□□ -1.15
YPK2YMR104C NSR1P27476 414 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16not detected
YPK2YMR104C CST9Q06032 482 aa7.8□□□□□ -1.16
YPK2YMR104C RAV1P47104 1357 aa7.8□□□□□ -1.16
YPK2YMR104C ENP1P38333 483 aaKnown RBP7.79□□□□□ -1.16
YPK2YMR104C RTC1Q08281 1341 aa7.78□□□□□ -1.16
YPK2YMR104C NUP188P52593 1655 aaKnown RBP7.78□□□□□ -1.16
YPK2YMR104C VMR1P38735 1592 aa7.77□□□□□ -1.17
YPK2YMR104C IML1P47170 1584 aa7.77□□□□□ -1.17
YPK2YMR104C SPT7P35177 1332 aa7.76□□□□□ -1.17
YPK2YMR104C MHP1P43638 1398 aa7.76□□□□□ -1.17
YPK2YMR104C DNF2Q12675 1612 aa7.75□□□□□ -1.17
YPK2YMR104C PDR11P40550 1411 aa7.75□□□□□ -1.17
YPK2YMR104C ORC1P54784 914 aaPredicted RBP7.74□□□□□ -1.17
YPK2YMR104C ITT1Q04638 464 aa7.74□□□□□ -1.17
YPK2YMR104C URN1Q06525 465 aaKnown RBP7.74□□□□□ -1.17
YPK2YMR104C TY3B-IQ7LHG5 1498 aaKnown RBP7.73□□□□□ -1.17
YPK2YMR104C ESL2P36168 1195 aa7.73□□□□□ -1.17
YPK2YMR104C TAF5P38129 798 aa7.72□□□□□ -1.17
YPK2YMR104C SCT1P32784 759 aa7.71□□□□□ -1.17
YPK2YMR104C YIL055CP40523 627 aaKnown RBP7.71□□□□□ -1.18
YPK2YMR104C BNI1P41832 1953 aa7.7□□□□□ -1.18
YPK2YMR104C YPR148CQ06523 435 aa7.69□□□□□ -1.18
YPK2YMR104C SPB4P25808 606 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms