RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLU1YMR012W KIN1P13185 1064 aa2.4□□□□□ -2.03
CLU1YMR012W KTR7P40504 517 aa2.4□□□□□ -2.03
CLU1YMR012W ARP8Q12386 881 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
CLU1YMR012W TY1B-NL2Q99337 1749 aaKnown RBP2.39□□□□□ -2.03
CLU1YMR012W NUP170P38181 1502 aa2.39□□□□□ -2.03
CLU1YMR012W YML020WQ03722 664 aa2.39□□□□□ -2.03
CLU1YMR012W ITT1Q04638 464 aa2.39□□□□□ -2.03
CLU1YMR012W MRM1P25270 412 aa2.39□□□□□ -2.03
CLU1YMR012W PAN1P32521 1480 aa2.39□□□□□ -2.03
CLU1YMR012W BUD3P25558 1636 aa2.37□□□□□ -2.03
CLU1YMR012W GUA1P38625 525 aaKnown RBP2.37□□□□□ -2.03
CLU1YMR012W CPS1P27614 576 aa2.37□□□□□ -2.03
CLU1YMR012W TYW1Q08960 810 aaKnown RBP2.37□□□□□ -2.03
CLU1YMR012W UBP9P39967 754 aa2.36□□□□□ -2.03
CLU1YMR012W SCC2Q04002 1493 aa2.36□□□□□ -2.03
CLU1YMR012W DNF3Q12674 1656 aa2.36□□□□□ -2.03
CLU1YMR012W UFD4P33202 1483 aa2.35□□□□□ -2.03
CLU1YMR012W TOP2P06786 1428 aaKnown RBP2.35□□□□□ -2.03
CLU1YMR012W SPO14P36126 1683 aa2.35□□□□□ -2.03
CLU1YMR012W DIT2P21595 489 aa2.35□□□□□ -2.03
CLU1YMR012W SET1P38827 1080 aaKnown RBP2.35□□□□□ -2.03
CLU1YMR012W RRD1P40454 393 aaKnown RBP2.35□□□□□ -2.03
CLU1YMR012W YPR204WQ08995 1032 aa2.34□□□□□ -2.03
CLU1YMR012W CHC1P22137 1653 aaKnown RBP2.34□□□□□ -2.03
CLU1YMR012W GDB1Q06625 1536 aa2.34□□□□□ -2.03
CLU1YMR012W SSA1P10591 642 aaKnown RBP2.34□□□□□ -2.04
CLU1YMR012W TIF4632P39936 914 aaKnown RBP2.33□□□□□ -2.04
CLU1YMR012W IES2P40154 320 aa2.33□□□□□ -2.04
CLU1YMR012W RLF2Q12495 606 aa2.33□□□□□ -2.04
CLU1YMR012W SIS1P25294 352 aaKnown RBP2.33□□□□□ -2.04
CLU1YMR012W TFB3Q03290 321 aa2.33□□□□□ -2.04
CLU1YMR012W RAM2P29703 316 aa2.32□□□□□ -2.04
CLU1YMR012W CDC27P38042 758 aa2.32□□□□□ -2.04
CLU1YMR012W GTT3P39996 337 aa2.32□□□□□ -2.04
CLU1YMR012W SLX8P40072 274 aa2.32□□□□□ -2.04
CLU1YMR012W ATF2P53296 535 aa2.32□□□□□ -2.04
CLU1YMR012W YML083CQ04526 418 aa2.32□□□□□ -2.04
CLU1YMR012W RPN1P38764 993 aaKnown RBP2.32□□□□□ -2.04
CLU1YMR012W TGL3P40308 642 aa2.32□□□□□ -2.04
CLU1YMR012W THI12P42883 340 aa2.32□□□□□ -2.04
CLU1YMR012W THI5P43534 340 aa2.32□□□□□ -2.04
CLU1YMR012W THI11P47183 340 aa2.32□□□□□ -2.04
CLU1YMR012W THI13Q07748 340 aa2.32□□□□□ -2.04
CLU1YMR012W MMS22Q06164 1454 aa2.31□□□□□ -2.04
CLU1YMR012W RSM7P47150 247 aa2.31□□□□□ -2.04
CLU1YMR012W TY1B-BRQ12193 1756 aa2.31□□□□□ -2.04
CLU1YMR012W TY1B-GR3Q12316 1755 aa2.31□□□□□ -2.04
CLU1YMR012W TY1B-ORQ92393 1755 aa2.31□□□□□ -2.04
CLU1YMR012W MAP2P38174 421 aaKnown RBP2.31□□□□□ -2.04
CLU1YMR012W SNT2P53127 1403 aa2.31□□□□□ -2.04
CLU1YMR012W MYO4P32492 1471 aa2.31□□□□□ -2.04
CLU1YMR012W ATG32P40458 529 aa2.3□□□□□ -2.04
CLU1YMR012W MGA2P40578 1113 aa2.3□□□□□ -2.04
CLU1YMR012W IML1P47170 1584 aa2.3□□□□□ -2.04
CLU1YMR012W MET10P39692 1035 aa2.3□□□□□ -2.04
CLU1YMR012W GLN1P32288 370 aaKnown RBP2.3□□□□□ -2.04
CLU1YMR012W RPL34BP40525 121 aaKnown RBP2.3□□□□□ -2.04
CLU1YMR012W YMR196WQ04336 1088 aa2.3□□□□□ -2.04
CLU1YMR012W NUP159P40477 1460 aa2.29□□□□□ -2.04
CLU1YMR012W LEU3P08638 886 aa2.29□□□□□ -2.04
CLU1YMR012W BNR1P40450 1375 aa2.29□□□□□ -2.04
CLU1YMR012W AI2P03876 854 aa2.29□□□□□ -2.04
CLU1YMR012W SCJ1P25303 377 aa2.29□□□□□ -2.04
CLU1YMR012W YNL108CP53929 270 aa2.29□□□□□ -2.04
CLU1YMR012W JIP5Q06214 492 aaPredicted RBP2.29□□□□□ -2.04
CLU1YMR012W BIM1P40013 344 aa2.28□□□□□ -2.04
CLU1YMR012W YJR008WP47085 338 aa2.28□□□□□ -2.04
CLU1YMR012W HAT1Q12341 374 aa2.28□□□□□ -2.04
CLU1YMR012W RIM101P33400 625 aa2.28□□□□□ -2.04
CLU1YMR012W STU1P38198 1513 aa2.28□□□□□ -2.04
CLU1YMR012W VHR2P40041 505 aa2.28□□□□□ -2.04
CLU1YMR012W YRF1-1P0CX20 1796 aa2.27□□□□□ -2.05
CLU1YMR012W YRF1-5P0CX21 1796 aa2.27□□□□□ -2.05
CLU1YMR012W YRF1-8P0CX22 1796 aa2.27□□□□□ -2.05
CLU1YMR012W RPO21P04050 1733 aaKnown RBP2.27□□□□□ -2.05
CLU1YMR012W PBS2P08018 668 aa2.27□□□□□ -2.05
CLU1YMR012W SPT21P35209 758 aa2.27□□□□□ -2.05
CLU1YMR012W YKR023WP36119 530 aaKnown RBP2.27□□□□□ -2.05
CLU1YMR012W SLX5P32828 619 aaKnown RBP2.26□□□□□ -2.05
CLU1YMR012W ENV9Q08651 330 aa2.26□□□□□ -2.05
CLU1YMR012W SSN2P38931 1420 aa2.26□□□□□ -2.05
CLU1YMR012W TY3B-GQ99315 1547 aa2.26□□□□□ -2.05
CLU1YMR012W YTA7P40340 1379 aa2.26□□□□□ -2.05
CLU1YMR012W ULS1Q08562 1619 aa2.25□□□□□ -2.05
CLU1YMR012W RPL34AP87262 121 aaPredicted RBP2.25□□□□□ -2.05
CLU1YMR012W BCK1Q01389 1478 aa2.25□□□□□ -2.05
CLU1YMR012W YMR074CQ04773 145 aa2.25□□□□□ -2.05
CLU1YMR012W TFC8Q12308 588 aa2.25□□□□□ -2.05
CLU1YMR012W XRN1P22147 1528 aaKnown RBP2.25□□□□□ -2.05
CLU1YMR012W PDR12Q02785 1511 aa2.25□□□□□ -2.05
CLU1YMR012W YOR1P53049 1477 aa2.24□□□□□ -2.05
CLU1YMR012W SCY1P53009 804 aa2.24□□□□□ -2.05
CLU1YMR012W SPP41P38904 1435 aa2.24□□□□□ -2.05
CLU1YMR012W ARO1P08566 1588 aaKnown RBP2.24□□□□□ -2.05
CLU1YMR012W YRF1-2P40105 1681 aa2.24□□□□□ -2.05
CLU1YMR012W TY1B-HO13535 1793 aa2.24□□□□□ -2.05
CLU1YMR012W TY1B-DR5P0C2I2 1755 aa2.24□□□□□ -2.05
CLU1YMR012W TY1B-DR6P0C2I3 1755 aa2.24□□□□□ -2.05
CLU1YMR012W TY1B-LR2P0C2I5 1755 aa2.24□□□□□ -2.05
CLU1YMR012W TY1B-LR3P0C2I6 1755 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms