RNA–Protein interactions for RNA: YLR381W

CTF3, Transcript of Outer kinetochore protein that forms a complex with Mcm16p and Mcm22p, yeastyeast

Gene CTF3, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF3YLR381W RPN1P38764 993 aaKnown RBP8.99□□□□□ -0.97
CTF3YLR381W IOC4Q04213 475 aa8.97□□□□□ -0.97
CTF3YLR381W YPK9Q12697 1472 aa8.96□□□□□ -0.97
CTF3YLR381W EDE1P34216 1381 aa8.96□□□□□ -0.98
CTF3YLR381W BYE1P36106 594 aa8.96□□□□□ -0.98
CTF3YLR381W YPP1P46951 817 aa8.96□□□□□ -0.98
CTF3YLR381W MYO4P32492 1471 aa8.96□□□□□ -0.98
CTF3YLR381W SMC4Q12267 1418 aa8.95□□□□□ -0.98
CTF3YLR381W SIC1P38634 284 aa8.95□□□□□ -0.98
CTF3YLR381W NNF2P53253 936 aa8.94□□□□□ -0.98
CTF3YLR381W THO2P53552 1597 aaKnown RBP8.94□□□□□ -0.98
CTF3YLR381W CHZ1P40019 153 aaPredicted RBP8.93□□□□□ -0.98
CTF3YLR381W PSD2P53037 1138 aaKnown RBP8.93□□□□□ -0.98
CTF3YLR381W PRP3Q03338 469 aaPredicted RBP8.93□□□□□ -0.98
CTF3YLR381W RLP24Q07915 199 aaKnown RBP8.93□□□□□ -0.98
CTF3YLR381W MSH3P25336 1018 aa8.92□□□□□ -0.98
CTF3YLR381W ETT1Q08421 412 aaKnown RBP8.92□□□□□ -0.98
CTF3YLR381W TAN1P53072 289 aaPredicted RBP8.92□□□□□ -0.98
CTF3YLR381W MYO2P19524 1574 aaKnown RBP8.91□□□□□ -0.98
CTF3YLR381W SWE1P32944 819 aa8.91□□□□□ -0.98
CTF3YLR381W LTV1P34078 463 aa8.91□□□□□ -0.98
CTF3YLR381W IRC20Q06554 1556 aa8.91□□□□□ -0.98
CTF3YLR381W DSN1P40568 576 aa8.9□□□□□ -0.98
CTF3YLR381W NST1P53935 1240 aa8.9□□□□□ -0.98
CTF3YLR381W DJP1P40564 432 aa8.89□□□□□ -0.99
CTF3YLR381W DOS2P54858 310 aa8.89□□□□□ -0.99
CTF3YLR381W GRX3Q03835 250 aa8.88□□□□□ -0.99
CTF3YLR381W PCT1P13259 424 aa8.87□□□□□ -0.99
CTF3YLR381W MSP1P28737 362 aa8.87□□□□□ -0.99
CTF3YLR381W CBF5P33322 483 aaKnown RBP RIP-Chip data8.87□□□□□ -0.99not detected
CTF3YLR381W VPS24P36095 224 aaKnown RBP8.87□□□□□ -0.99
CTF3YLR381W SRP54P20424 541 aaKnown RBP8.86□□□□□ -0.99
CTF3YLR381W CLB5P30283 435 aa8.86□□□□□ -0.99
CTF3YLR381W NOP8Q08287 484 aaPredicted RBP8.86□□□□□ -0.99
CTF3YLR381W STU1P38198 1513 aa8.86□□□□□ -0.99
CTF3YLR381W RPS0AP32905 252 aaKnown RBP8.85□□□□□ -0.99
CTF3YLR381W IFH1P39520 1085 aa8.85□□□□□ -0.99
CTF3YLR381W KNS1P32350 737 aaPredicted RBP8.84□□□□□ -0.99
CTF3YLR381W ARL1P38116 183 aaKnown RBP8.84□□□□□ -0.99
CTF3YLR381W YSH1Q06224 779 aaPredicted RBP8.84□□□□□ -0.99
CTF3YLR381W BMS1Q08965 1183 aaKnown RBP8.84□□□□□ -0.99
CTF3YLR381W TAF2P23255 1407 aa8.84□□□□□ -0.99
CTF3YLR381W SPT6P23615 1451 aaKnown RBP8.84□□□□□ -0.99
CTF3YLR381W MED8P38304 223 aa8.84□□□□□ -0.99
CTF3YLR381W RPN7Q06103 429 aaKnown RBP8.82□□□□□ -1
CTF3YLR381W MLP2P40457 1679 aa8.82□□□□□ -1
CTF3YLR381W TPM2P40414 161 aa8.82□□□□□ -1
CTF3YLR381W PAN1P32521 1480 aa8.82□□□□□ -1
CTF3YLR381W ECM16Q04217 1267 aaKnown RBP8.81□□□□□ -1
CTF3YLR381W MHP1P43638 1398 aa8.81□□□□□ -1
CTF3YLR381W TCD1P38756 429 aa8.81□□□□□ -1
CTF3YLR381W CIN4P39110 191 aa8.8□□□□□ -1
CTF3YLR381W ECM1P39715 212 aa8.8□□□□□ -1
CTF3YLR381W SWI3P32591 825 aa8.79□□□□□ -1
CTF3YLR381W SNU71P53207 620 aaKnown RBP8.79□□□□□ -1
CTF3YLR381W VPS60Q03390 229 aa8.79□□□□□ -1
CTF3YLR381W TIF4632P39936 914 aaKnown RBP8.78□□□□□ -1
CTF3YLR381W PET111P08468 800 aa8.77□□□□□ -1.01
CTF3YLR381W DEP1P31385 405 aa8.77□□□□□ -1.01
CTF3YLR381W SAP190P36123 1033 aa8.77□□□□□ -1.01
CTF3YLR381W NOP14Q99207 810 aaKnown RBP8.77□□□□□ -1.01
CTF3YLR381W CLB1P24868 471 aa8.77□□□□□ -1.01
CTF3YLR381W VPS72Q03388 795 aa8.77□□□□□ -1.01
CTF3YLR381W LSP1Q12230 341 aaKnown RBP8.77□□□□□ -1.01
CTF3YLR381W RNT1Q02555 471 aa8.76□□□□□ -1.01
CTF3YLR381W TRM3Q07527 1436 aa8.76□□□□□ -1.01
CTF3YLR381W RAD2P07276 1031 aa8.76□□□□□ -1.01
CTF3YLR381W RRP15Q06511 250 aaPredicted RBP8.75□□□□□ -1.01
CTF3YLR381W DNA2P38859 1522 aa8.75□□□□□ -1.01
CTF3YLR381W SCC2Q04002 1493 aa8.75□□□□□ -1.01
CTF3YLR381W KIP3P53086 805 aaKnown RBP8.74□□□□□ -1.01
CTF3YLR381W TLG1Q03322 224 aa8.74□□□□□ -1.01
CTF3YLR381W RAD51P25454 400 aa8.74□□□□□ -1.01
CTF3YLR381W ESC2Q06340 456 aa8.74□□□□□ -1.01
CTF3YLR381W CDC45Q08032 650 aa8.74□□□□□ -1.01
CTF3YLR381W GEA1P47102 1408 aaPredicted RBP8.72□□□□□ -1.01
CTF3YLR381W TOP1P04786 769 aa8.72□□□□□ -1.01
CTF3YLR381W RPP0P05317 312 aaKnown RBP8.72□□□□□ -1.01
CTF3YLR381W TEA1P47988 759 aa8.72□□□□□ -1.01
CTF3YLR381W MDG1P53885 366 aa8.72□□□□□ -1.01
CTF3YLR381W RAD9P14737 1309 aa8.71□□□□□ -1.01
CTF3YLR381W HOS3Q02959 697 aaKnown RBP8.71□□□□□ -1.02
CTF3YLR381W YVC1Q12324 675 aa8.71□□□□□ -1.02
CTF3YLR381W REV3P14284 1504 aa8.71□□□□□ -1.02
CTF3YLR381W ERV41Q04651 352 aa8.7□□□□□ -1.02
CTF3YLR381W RRP14P36080 434 aaKnown RBP8.7□□□□□ -1.02
CTF3YLR381W VPS27P40343 622 aaKnown RBP8.7□□□□□ -1.02
CTF3YLR381W APL5Q08951 932 aaKnown RBP8.7□□□□□ -1.02
CTF3YLR381W RSC1P53236 928 aa8.69□□□□□ -1.02
CTF3YLR381W VPS30Q02948 557 aa8.69□□□□□ -1.02
CTF3YLR381W LCD1Q04377 747 aa8.69□□□□□ -1.02
CTF3YLR381W HIF1Q12373 385 aa8.69□□□□□ -1.02
CTF3YLR381W RVB2Q12464 471 aaKnown RBP8.69□□□□□ -1.02
CTF3YLR381W POL1P13382 1468 aa8.68□□□□□ -1.02
CTF3YLR381W PAP2P53632 584 aaKnown RBP8.68□□□□□ -1.02
CTF3YLR381W YOL087CQ99247 1116 aa8.68□□□□□ -1.02
CTF3YLR381W NHA1Q99271 985 aa8.68□□□□□ -1.02
CTF3YLR381W SWR1Q05471 1514 aa8.68□□□□□ -1.02
CTF3YLR381W UBP10P53874 792 aaPredicted RBP8.68□□□□□ -1.02
CTF3YLR381W RSC8P43609 557 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 63.9 ms