RNA–Protein interactions for RNA: YLR136C

TIS11, Transcript of mRNA-binding protein expressed during iron starvation, yeastyeast

Gene TIS11, Length 858 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIS11YLR136C HTA2P04912 132 aa9.1□□□□□ -0.95
TIS11YLR136C ABP1P15891 592 aaKnown RBP9.09□□□□□ -0.95
TIS11YLR136C BCK2P33306 851 aa9.09□□□□□ -0.95
TIS11YLR136C CHL1P22516 861 aaPredicted RBP9.08□□□□□ -0.96
TIS11YLR136C YEL023CP39992 682 aa9.08□□□□□ -0.96
TIS11YLR136C YDR344CQ05510 147 aa9.08□□□□□ -0.96
TIS11YLR136C PTC4P38089 393 aa9.07□□□□□ -0.96
TIS11YLR136C PRE3P38624 215 aa9.06□□□□□ -0.96
TIS11YLR136C RAM2P29703 316 aa9.03□□□□□ -0.96
TIS11YLR136C MAK11P20484 414 aaKnown RBP8.95□□□□□ -0.98
TIS11YLR136C PML39Q03760 334 aa8.93□□□□□ -0.98
TIS11YLR136C GRE2Q12068 342 aaKnown RBP8.92□□□□□ -0.98
TIS11YLR136C EDS1P38073 919 aa8.91□□□□□ -0.98
TIS11YLR136C VRP1P37370 817 aa8.89□□□□□ -0.99
TIS11YLR136C NST1P53935 1240 aa8.89□□□□□ -0.99
TIS11YLR136C MIF2P35201 549 aa8.88□□□□□ -0.99
TIS11YLR136C XDJ1P39102 459 aa8.86□□□□□ -0.99
TIS11YLR136C PTC3P34221 468 aaKnown RBP8.85□□□□□ -0.99
TIS11YLR136C MID1P41821 548 aa8.84□□□□□ -0.99
TIS11YLR136C COQ8P27697 501 aa8.83□□□□□ -1
TIS11YLR136C SOL3P38858 249 aa8.83□□□□□ -1
TIS11YLR136C ELP4Q02884 456 aaKnown RBP8.83□□□□□ -1
TIS11YLR136C GUT1P32190 709 aa8.82□□□□□ -1
TIS11YLR136C ATH1P48016 1211 aa8.81□□□□□ -1
TIS11YLR136C ARH1P48360 493 aa8.79□□□□□ -1
TIS11YLR136C ILV3P39522 585 aaKnown RBP8.75□□□□□ -1.01
TIS11YLR136C TAF7Q05021 590 aa8.74□□□□□ -1.01
TIS11YLR136C DPS1P04802 557 aaKnown RBP8.7□□□□□ -1.02
TIS11YLR136C MPH3P0CE00 602 aa8.7□□□□□ -1.02
TIS11YLR136C SET1P38827 1080 aaKnown RBP8.7□□□□□ -1.02
TIS11YLR136C AI4P03878 556 aa8.68□□□□□ -1.02
TIS11YLR136C LEO1P38439 464 aa8.68□□□□□ -1.02
TIS11YLR136C NOP53Q12080 455 aaKnown RBP8.67□□□□□ -1.02
TIS11YLR136C PEX29Q03370 554 aa8.66□□□□□ -1.02
TIS11YLR136C SPT23P35210 1082 aa8.65□□□□□ -1.02
TIS11YLR136C SAS10Q12136 610 aaPredicted RBP8.64□□□□□ -1.03
TIS11YLR136C SRC1Q03707 834 aa8.62□□□□□ -1.03
TIS11YLR136C HAP5Q02516 242 aa8.61□□□□□ -1.03
TIS11YLR136C YGR273CP53329 174 aa8.58□□□□□ -1.04
TIS11YLR136C MPC54Q08550 464 aa8.58□□□□□ -1.04
TIS11YLR136C BNI4P53858 892 aa8.57□□□□□ -1.04
TIS11YLR136C YML082WQ04533 649 aaKnown RBP8.55□□□□□ -1.04
TIS11YLR136C SLI15P38283 698 aa8.51□□□□□ -1.05
TIS11YLR136C LEU3P08638 886 aa8.5□□□□□ -1.05
TIS11YLR136C IFH1P39520 1085 aa8.5□□□□□ -1.05
TIS11YLR136C PTC2P39966 464 aaKnown RBP8.5□□□□□ -1.05
TIS11YLR136C NMA111P53920 997 aa8.49□□□□□ -1.05
TIS11YLR136C YPR015CQ12531 247 aa8.48□□□□□ -1.05
TIS11YLR136C YPR148CQ06523 435 aa8.46□□□□□ -1.06
TIS11YLR136C RAS1P01119 309 aa8.43□□□□□ -1.06
TIS11YLR136C RAM1P22007 431 aa8.43□□□□□ -1.06
TIS11YLR136C VPS70P47161 811 aa8.43□□□□□ -1.06
TIS11YLR136C DPL1Q05567 589 aa8.42□□□□□ -1.06
TIS11YLR136C RGA2Q06407 1009 aa8.41□□□□□ -1.06
TIS11YLR136C VHR2P40041 505 aa8.4□□□□□ -1.06
TIS11YLR136C KEX1P09620 729 aa8.39□□□□□ -1.07
TIS11YLR136C UBP14P38237 781 aaKnown RBP8.38□□□□□ -1.07
TIS11YLR136C YLR326WQ06170 240 aaKnown RBP8.38□□□□□ -1.07
TIS11YLR136C CDC73Q06697 393 aa8.35□□□□□ -1.07
TIS11YLR136C REF2P42073 533 aaPredicted RBP8.34□□□□□ -1.07
TIS11YLR136C ISU2Q12056 156 aa8.32□□□□□ -1.08
TIS11YLR136C RAD54P32863 898 aa8.31□□□□□ -1.08
TIS11YLR136C RGA1P39083 1007 aa8.31□□□□□ -1.08
TIS11YLR136C PCS60P38137 543 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
TIS11YLR136C PDR1P12383 1068 aa8.29□□□□□ -1.08
TIS11YLR136C SDH2P21801 266 aa8.29□□□□□ -1.08
TIS11YLR136C YDR090CQ03193 310 aa8.29□□□□□ -1.08
TIS11YLR136C CKB1P43639 278 aa8.27□□□□□ -1.09
TIS11YLR136C KIC1P38692 1080 aa8.26□□□□□ -1.09
TIS11YLR136C AMS1P22855 1083 aa8.23□□□□□ -1.09
TIS11YLR136C GYP1Q08484 637 aa8.22□□□□□ -1.09
TIS11YLR136C RPN1P38764 993 aaKnown RBP8.21□□□□□ -1.1
TIS11YLR136C MAK21Q12176 1025 aaKnown RBP8.21□□□□□ -1.1
TIS11YLR136C COX6P00427 148 aa8.2□□□□□ -1.1
TIS11YLR136C PBS2P08018 668 aa8.2□□□□□ -1.1
TIS11YLR136C RPP1BP10622 106 aaKnown RBP8.16□□□□□ -1.1
TIS11YLR136C TRK1P12685 1235 aa8.16□□□□□ -1.1
TIS11YLR136C SPB4P25808 606 aaPredicted RBP8.14□□□□□ -1.11
TIS11YLR136C DSF2P38213 736 aa8.11□□□□□ -1.11
TIS11YLR136C SAS4Q04003 481 aa8.11□□□□□ -1.11
TIS11YLR136C ORC6P38826 435 aa8.1□□□□□ -1.11
TIS11YLR136C DMA2P53924 522 aa8.1□□□□□ -1.11
TIS11YLR136C BUD20Q08004 166 aaPredicted RBP8.1□□□□□ -1.11
TIS11YLR136C MAM3Q12296 706 aa8.1□□□□□ -1.11
TIS11YLR136C GAP1P19145 602 aaPredicted RBP8.08□□□□□ -1.12
TIS11YLR136C PEX21P50091 288 aa8.07□□□□□ -1.12
TIS11YLR136C CSC1Q06538 782 aa8.07□□□□□ -1.12
TIS11YLR136C IES2P40154 320 aa8.06□□□□□ -1.12
TIS11YLR136C STR2P47164 639 aa8.05□□□□□ -1.12
TIS11YLR136C TFB4Q12004 338 aa8.04□□□□□ -1.12
TIS11YLR136C YRR1Q12172 810 aa8.04□□□□□ -1.12
TIS11YLR136C ISM1P48526 1002 aa8.03□□□□□ -1.12
TIS11YLR136C YEL077CQ3E7X8 1277 aa8.03□□□□□ -1.12
TIS11YLR136C MVP1P40959 511 aaKnown RBP8.02□□□□□ -1.13
TIS11YLR136C TUM1Q08686 304 aaKnown RBP8.02□□□□□ -1.13
TIS11YLR136C PRT1P06103 763 aaKnown RBP8□□□□□ -1.13
TIS11YLR136C RGR1P19263 1082 aa7.99□□□□□ -1.13
TIS11YLR136C NUP42P49686 430 aaKnown RBP7.99□□□□□ -1.13
TIS11YLR136C CLA4P48562 842 aa7.98□□□□□ -1.13
TIS11YLR136C PSE1P32337 1089 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms