RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeastyeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC4YLR086W PSE1P32337 1089 aaKnown RBP2.42□□□□□ -2.02
SMC4YLR086W UBP14P38237 781 aaKnown RBP2.42□□□□□ -2.02
SMC4YLR086W KIN1P13185 1064 aa2.42□□□□□ -2.02
SMC4YLR086W HGH1P48362 394 aaKnown RBP2.42□□□□□ -2.02
SMC4YLR086W GAP1P19145 602 aaPredicted RBP2.41□□□□□ -2.02
SMC4YLR086W YGR273CP53329 174 aa2.41□□□□□ -2.02
SMC4YLR086W MSB4Q12317 492 aa2.4□□□□□ -2.02
SMC4YLR086W AI4P03878 556 aa2.4□□□□□ -2.03
SMC4YLR086W YLR326WQ06170 240 aaKnown RBP2.4□□□□□ -2.03
SMC4YLR086W GRE2Q12068 342 aaKnown RBP2.4□□□□□ -2.03
SMC4YLR086W MPH3P0CE00 602 aa2.39□□□□□ -2.03
SMC4YLR086W DIT2P21595 489 aa2.39□□□□□ -2.03
SMC4YLR086W SOL3P38858 249 aa2.39□□□□□ -2.03
SMC4YLR086W IES2P40154 320 aa2.39□□□□□ -2.03
SMC4YLR086W DMA2P53924 522 aa2.39□□□□□ -2.03
SMC4YLR086W CLB5P30283 435 aa2.38□□□□□ -2.03
SMC4YLR086W ORC6P38826 435 aa2.38□□□□□ -2.03
SMC4YLR086W ATH1P48016 1211 aa2.38□□□□□ -2.03
SMC4YLR086W KEX1P09620 729 aa2.37□□□□□ -2.03
SMC4YLR086W WSC3Q12215 556 aa2.37□□□□□ -2.03
SMC4YLR086W SSA2P10592 639 aaKnown RBP2.37□□□□□ -2.03
SMC4YLR086W PCS60P38137 543 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
SMC4YLR086W GYP5Q12344 894 aa2.37□□□□□ -2.03
SMC4YLR086W GLC3P32775 704 aa2.36□□□□□ -2.03
SMC4YLR086W EAP1P36041 632 aaKnown RBP2.36□□□□□ -2.03
SMC4YLR086W RAD54P32863 898 aa2.35□□□□□ -2.03
SMC4YLR086W CSC1Q06538 782 aa2.35□□□□□ -2.03
SMC4YLR086W GUA1P38625 525 aaKnown RBP2.35□□□□□ -2.03
SMC4YLR086W ATF2P53296 535 aa2.35□□□□□ -2.03
SMC4YLR086W JIP4Q03361 876 aa2.35□□□□□ -2.03
SMC4YLR086W SIT4P20604 311 aa2.35□□□□□ -2.03
SMC4YLR086W CSE4P36012 229 aa2.35□□□□□ -2.03
SMC4YLR086W YOL036WQ08206 761 aa2.35□□□□□ -2.03
SMC4YLR086W TFB4Q12004 338 aa2.35□□□□□ -2.03
SMC4YLR086W HTA1P04911 132 aaKnown RBP2.34□□□□□ -2.03
SMC4YLR086W HTA2P04912 132 aa2.34□□□□□ -2.03
SMC4YLR086W RGR1P19263 1082 aa2.34□□□□□ -2.03
SMC4YLR086W RPP1BP10622 106 aaKnown RBP2.34□□□□□ -2.04
SMC4YLR086W PTC4P38089 393 aa2.34□□□□□ -2.04
SMC4YLR086W KIC1P38692 1080 aa2.34□□□□□ -2.04
SMC4YLR086W VHR2P40041 505 aa2.34□□□□□ -2.04
SMC4YLR086W HST2P53686 357 aa2.34□□□□□ -2.04
SMC4YLR086W MVP1P40959 511 aaKnown RBP2.33□□□□□ -2.04
SMC4YLR086W DAN4P47179 1161 aa2.33□□□□□ -2.04
SMC4YLR086W RTF1P53064 558 aa2.33□□□□□ -2.04
SMC4YLR086W SPT5P27692 1063 aaKnown RBP2.32□□□□□ -2.04
SMC4YLR086W TEA1P47988 759 aa2.32□□□□□ -2.04
SMC4YLR086W BRL1P38770 471 aa2.32□□□□□ -2.04
SMC4YLR086W ILV3P39522 585 aaKnown RBP2.32□□□□□ -2.04
SMC4YLR086W CSN12P47130 423 aa2.32□□□□□ -2.04
SMC4YLR086W SLI15P38283 698 aa2.31□□□□□ -2.04
SMC4YLR086W BUB1P41695 1021 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
SMC4YLR086W SIS2P36024 562 aa2.31□□□□□ -2.04
SMC4YLR086W GTT3P39996 337 aa2.31□□□□□ -2.04
SMC4YLR086W TFB3Q03290 321 aa2.31□□□□□ -2.04
SMC4YLR086W IOC2Q12072 812 aa2.31□□□□□ -2.04
SMC4YLR086W RSC30P38781 883 aa2.31□□□□□ -2.04
SMC4YLR086W SEC61P32915 480 aa2.3□□□□□ -2.04
SMC4YLR086W YEL023CP39992 682 aa2.3□□□□□ -2.04
SMC4YLR086W KTR1P27810 393 aaKnown RBP2.3□□□□□ -2.04
SMC4YLR086W GLN1P32288 370 aaKnown RBP2.3□□□□□ -2.04
SMC4YLR086W NAF1P53919 492 aaKnown RBP2.3□□□□□ -2.04
SMC4YLR086W NOP8Q08287 484 aaPredicted RBP2.3□□□□□ -2.04
SMC4YLR086W TIF11P38912 153 aaKnown RBP2.29□□□□□ -2.04
SMC4YLR086W VNX1P42839 908 aa2.29□□□□□ -2.04
SMC4YLR086W SUP45P12385 437 aaKnown RBP2.29□□□□□ -2.04
SMC4YLR086W DCW1P36091 449 aa2.29□□□□□ -2.04
SMC4YLR086W YNL035CP53962 389 aaKnown RBP2.29□□□□□ -2.04
SMC4YLR086W TRP5P00931 707 aaKnown RBP2.28□□□□□ -2.04
SMC4YLR086W FPK1P53739 893 aa2.28□□□□□ -2.04
SMC4YLR086W LAM6Q08001 693 aa2.28□□□□□ -2.04
SMC4YLR086W NIS1P53939 407 aa2.28□□□□□ -2.04
SMC4YLR086W DPL1Q05567 589 aa2.28□□□□□ -2.04
SMC4YLR086W ISU2Q12056 156 aa2.28□□□□□ -2.04
SMC4YLR086W MAK16P10962 306 aaPredicted RBP2.27□□□□□ -2.05
SMC4YLR086W TPD3P31383 635 aa2.27□□□□□ -2.05
SMC4YLR086W SET4P42948 560 aa2.27□□□□□ -2.05
SMC4YLR086W YNL115CP53925 644 aa2.27□□□□□ -2.05
SMC4YLR086W YPR109WQ06104 294 aa2.27□□□□□ -2.05
SMC4YLR086W SSA1P10591 642 aaKnown RBP2.27□□□□□ -2.05
SMC4YLR086W SUB2Q07478 446 aaKnown RBP2.27□□□□□ -2.05
SMC4YLR086W MMP1Q12372 583 aa2.27□□□□□ -2.05
SMC4YLR086W MRX10Q05648 414 aa2.27□□□□□ -2.05
SMC4YLR086W GEF1P37020 779 aa2.26□□□□□ -2.05
SMC4YLR086W UBP9P39967 754 aa2.26□□□□□ -2.05
SMC4YLR086W BIM1P40013 344 aa2.26□□□□□ -2.05
SMC4YLR086W YPP1P46951 817 aa2.26□□□□□ -2.05
SMC4YLR086W MRX12P47084 519 aa2.26□□□□□ -2.05
SMC4YLR086W PKC1P24583 1151 aa2.26□□□□□ -2.05
SMC4YLR086W RAD59Q12223 238 aa2.26□□□□□ -2.05
SMC4YLR086W SSA4P22202 642 aaKnown RBP2.26□□□□□ -2.05
SMC4YLR086W ULI1P43604 169 aa2.25□□□□□ -2.05
SMC4YLR086W ITT1Q04638 464 aa2.25□□□□□ -2.05
SMC4YLR086W UTP13Q05946 817 aaKnown RBP2.25□□□□□ -2.05
SMC4YLR086W CDC73Q06697 393 aa2.25□□□□□ -2.05
SMC4YLR086W MPC54Q08550 464 aa2.25□□□□□ -2.05
SMC4YLR086W PEP12P32854 288 aa2.25□□□□□ -2.05
SMC4YLR086W ARH1P48360 493 aa2.25□□□□□ -2.05
SMC4YLR086W TIF1P10081 395 aaKnown RBP2.25□□□□□ -2.05
SMC4YLR086W TTI1P36097 1038 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms