RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C NOP53Q12080 455 aaKnown RBP11.49□□□□□ -0.57
SED5YLR026C AIR2Q12476 344 aaKnown RBP11.48□□□□□ -0.57
SED5YLR026C YNL035CP53962 389 aaKnown RBP11.45□□□□□ -0.58
SED5YLR026C YEL023CP39992 682 aa11.44□□□□□ -0.58
SED5YLR026C SOL3P38858 249 aa11.4□□□□□ -0.58
SED5YLR026C DAN4P47179 1161 aa11.39□□□□□ -0.59
SED5YLR026C JIP4Q03361 876 aa11.39□□□□□ -0.59
SED5YLR026C PTC4P38089 393 aa11.38□□□□□ -0.59
SED5YLR026C NCR1Q12200 1170 aa11.38□□□□□ -0.59
SED5YLR026C SEC61P32915 480 aa11.36□□□□□ -0.59
SED5YLR026C NST1P53935 1240 aa11.35□□□□□ -0.59
SED5YLR026C YJL171CP46992 396 aa11.34□□□□□ -0.59
SED5YLR026C YGR273CP53329 174 aa11.31□□□□□ -0.6
SED5YLR026C TFG1P41895 735 aaPredicted RBP11.28□□□□□ -0.6
SED5YLR026C IFH1P39520 1085 aa11.26□□□□□ -0.61
SED5YLR026C BMT6Q12291 365 aa11.26□□□□□ -0.61
SED5YLR026C YPR148CQ06523 435 aa11.25□□□□□ -0.61
SED5YLR026C ILV3P39522 585 aaKnown RBP11.24□□□□□ -0.61
SED5YLR026C VPS70P47161 811 aa11.24□□□□□ -0.61
SED5YLR026C MPH3P0CE00 602 aa11.23□□□□□ -0.61
SED5YLR026C PML39Q03760 334 aa11.22□□□□□ -0.61
SED5YLR026C AI4P03878 556 aa11.21□□□□□ -0.61
SED5YLR026C RQC2Q12532 1038 aaKnown RBP11.21□□□□□ -0.61
SED5YLR026C SAP30P38429 201 aa11.2□□□□□ -0.62
SED5YLR026C YDL129WQ07555 291 aa11.2□□□□□ -0.62
SED5YLR026C VHR2P40041 505 aa11.18□□□□□ -0.62
SED5YLR026C MID1P41821 548 aa11.16□□□□□ -0.62
SED5YLR026C KEX1P09620 729 aa11.14□□□□□ -0.63
SED5YLR026C UBP14P38237 781 aaKnown RBP11.14□□□□□ -0.63
SED5YLR026C YLR326WQ06170 240 aaKnown RBP11.13□□□□□ -0.63
SED5YLR026C SAS10Q12136 610 aaPredicted RBP11.1□□□□□ -0.63
SED5YLR026C REF2P42073 533 aaPredicted RBP11.08□□□□□ -0.64
SED5YLR026C SLI15P38283 698 aa11.06□□□□□ -0.64
SED5YLR026C YDR344CQ05510 147 aa11.06□□□□□ -0.64
SED5YLR026C PCS60P38137 543 aaKnown RBP RIP-Chip data11.03□□□□□ -0.64not detected
SED5YLR026C YDR090CQ03193 310 aa11.03□□□□□ -0.64
SED5YLR026C RAD54P32863 898 aa11.02□□□□□ -0.65
SED5YLR026C PEX29Q03370 554 aa11.02□□□□□ -0.65
SED5YLR026C CKB1P43639 278 aa10.98□□□□□ -0.65
SED5YLR026C MPC54Q08550 464 aa10.97□□□□□ -0.65
SED5YLR026C PRE3P38624 215 aa10.96□□□□□ -0.65
SED5YLR026C KIC1P38692 1080 aa10.95□□□□□ -0.66
SED5YLR026C ELP4Q02884 456 aaKnown RBP10.95□□□□□ -0.66
SED5YLR026C CDC73Q06697 393 aa10.94□□□□□ -0.66
SED5YLR026C ARH1P48360 493 aa10.93□□□□□ -0.66
SED5YLR026C PBS2P08018 668 aa10.92□□□□□ -0.66
SED5YLR026C CHL1P22516 861 aaPredicted RBP10.92□□□□□ -0.66
SED5YLR026C DPL1Q05567 589 aa10.91□□□□□ -0.66
SED5YLR026C COX6P00427 148 aa10.89□□□□□ -0.67
SED5YLR026C NMA111P53920 997 aa10.89□□□□□ -0.67
SED5YLR026C HAP5Q02516 242 aa10.87□□□□□ -0.67
SED5YLR026C MAK21Q12176 1025 aaKnown RBP10.87□□□□□ -0.67
SED5YLR026C SPB4P25808 606 aaPredicted RBP10.84□□□□□ -0.67
SED5YLR026C SPT23P35210 1082 aa10.79□□□□□ -0.68
SED5YLR026C ISU2Q12056 156 aa10.79□□□□□ -0.68
SED5YLR026C DSF2P38213 736 aa10.78□□□□□ -0.68
SED5YLR026C RPP1BP10622 106 aaKnown RBP10.77□□□□□ -0.69
SED5YLR026C ORC6P38826 435 aa10.77□□□□□ -0.69
SED5YLR026C MAM3Q12296 706 aa10.77□□□□□ -0.69
SED5YLR026C BNI4P53858 892 aa10.76□□□□□ -0.69
SED5YLR026C IES2P40154 320 aa10.72□□□□□ -0.69
SED5YLR026C GAP1P19145 602 aaPredicted RBP10.71□□□□□ -0.69
SED5YLR026C BCK2P33306 851 aa10.71□□□□□ -0.69
SED5YLR026C VRP1P37370 817 aa10.71□□□□□ -0.69
SED5YLR026C PTC2P39966 464 aaKnown RBP10.71□□□□□ -0.69
SED5YLR026C PEX21P50091 288 aa10.71□□□□□ -0.69
SED5YLR026C PDR1P12383 1068 aa10.7□□□□□ -0.7
SED5YLR026C CSC1Q06538 782 aa10.7□□□□□ -0.7
SED5YLR026C YRR1Q12172 810 aa10.67□□□□□ -0.7
SED5YLR026C MVP1P40959 511 aaKnown RBP10.65□□□□□ -0.7
SED5YLR026C TUM1Q08686 304 aaKnown RBP10.65□□□□□ -0.7
SED5YLR026C TFB4Q12004 338 aa10.65□□□□□ -0.7
SED5YLR026C NUP42P49686 430 aaKnown RBP10.64□□□□□ -0.71
SED5YLR026C YML082WQ04533 649 aaKnown RBP10.64□□□□□ -0.71
SED5YLR026C RAM1P22007 431 aa10.63□□□□□ -0.71
SED5YLR026C YPR015CQ12531 247 aa10.63□□□□□ -0.71
SED5YLR026C RGR1P19263 1082 aa10.62□□□□□ -0.71
SED5YLR026C DIT2P21595 489 aa10.62□□□□□ -0.71
SED5YLR026C YPR109WQ06104 294 aa10.59□□□□□ -0.71
SED5YLR026C PSE1P32337 1089 aaKnown RBP10.58□□□□□ -0.72
SED5YLR026C NUD1P32336 851 aa10.52□□□□□ -0.73
SED5YLR026C XDJ1P39102 459 aa10.52□□□□□ -0.73
SED5YLR026C STR2P47164 639 aa10.49□□□□□ -0.73
SED5YLR026C ISM1P48526 1002 aa10.49□□□□□ -0.73
SED5YLR026C BUD20Q08004 166 aaPredicted RBP10.47□□□□□ -0.73
SED5YLR026C GYP1Q08484 637 aa10.45□□□□□ -0.74
SED5YLR026C NPL4P33755 580 aa10.44□□□□□ -0.74
SED5YLR026C GLC3P32775 704 aa10.43□□□□□ -0.74
SED5YLR026C TEA1P47988 759 aa10.42□□□□□ -0.74
SED5YLR026C YNR021WP53723 404 aaKnown RBP10.42□□□□□ -0.74
SED5YLR026C CLB5P30283 435 aa10.41□□□□□ -0.74
SED5YLR026C PRT1P06103 763 aaKnown RBP10.39□□□□□ -0.75
SED5YLR026C GCD11P32481 527 aaKnown RBP10.39□□□□□ -0.75
SED5YLR026C LEU3P08638 886 aa10.38□□□□□ -0.75
SED5YLR026C ATF2P53296 535 aa10.38□□□□□ -0.75
SED5YLR026C KEX2P13134 814 aa10.37□□□□□ -0.75
SED5YLR026C ERF2Q06551 359 aa10.37□□□□□ -0.75
SED5YLR026C TY1A-DR4O74302 440 aa10.36□□□□□ -0.75
SED5YLR026C TY1A-HP0C2I4 478 aaKnown RBP10.36□□□□□ -0.75
SED5YLR026C TY1A-AP0CX57 440 aa10.36□□□□□ -0.75
Retrieved 100 of 5,963 RNA–protein pairs in 48.8 ms