RNA–Protein interactions for RNA: YKL211C

TRP3, Transcript of Indole-3-glycerol-phosphate synthase, yeastyeast

Gene TRP3, Length 1,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP3YKL211C YDL129WQ07555 291 aa8.55□□□□□ -1.04
TRP3YKL211C DCW1P36091 449 aa8.53□□□□□ -1.04
TRP3YKL211C SAP30P38429 201 aa8.53□□□□□ -1.04
TRP3YKL211C YEL023CP39992 682 aa8.53□□□□□ -1.04
TRP3YKL211C CHL1P22516 861 aaPredicted RBP8.5□□□□□ -1.05
TRP3YKL211C GRE2Q12068 342 aaKnown RBP8.49□□□□□ -1.05
TRP3YKL211C MAK11P20484 414 aaKnown RBP8.47□□□□□ -1.05
TRP3YKL211C SSN2P38931 1420 aa8.46□□□□□ -1.05
TRP3YKL211C BCK2P33306 851 aa8.45□□□□□ -1.06
TRP3YKL211C PRE3P38624 215 aa8.45□□□□□ -1.06
TRP3YKL211C MIF2P35201 549 aa8.43□□□□□ -1.06
TRP3YKL211C ATH1P48016 1211 aa8.42□□□□□ -1.06
TRP3YKL211C GUT1P32190 709 aa8.41□□□□□ -1.06
TRP3YKL211C INO80P53115 1489 aa8.37□□□□□ -1.07
TRP3YKL211C RAM2P29703 316 aa8.37□□□□□ -1.07
TRP3YKL211C PTC3P34221 468 aaKnown RBP8.37□□□□□ -1.07
TRP3YKL211C PML39Q03760 334 aa8.35□□□□□ -1.07
TRP3YKL211C COQ8P27697 501 aa8.32□□□□□ -1.08
TRP3YKL211C SKI3P17883 1432 aaKnown RBP8.31□□□□□ -1.08
TRP3YKL211C EDS1P38073 919 aa8.31□□□□□ -1.08
TRP3YKL211C ELP4Q02884 456 aaKnown RBP8.3□□□□□ -1.08
TRP3YKL211C NOP53Q12080 455 aaKnown RBP8.3□□□□□ -1.08
TRP3YKL211C XDJ1P39102 459 aa8.26□□□□□ -1.09
TRP3YKL211C AI4P03878 556 aa8.25□□□□□ -1.09
TRP3YKL211C VRP1P37370 817 aa8.25□□□□□ -1.09
TRP3YKL211C ARH1P48360 493 aa8.25□□□□□ -1.09
TRP3YKL211C MPH3P0CE00 602 aa8.23□□□□□ -1.09
TRP3YKL211C NST1P53935 1240 aa8.23□□□□□ -1.09
TRP3YKL211C PEX29Q03370 554 aa8.21□□□□□ -1.09
TRP3YKL211C SOL3P38858 249 aa8.19□□□□□ -1.1
TRP3YKL211C SPT23P35210 1082 aa8.18□□□□□ -1.1
TRP3YKL211C MID1P41821 548 aa8.18□□□□□ -1.1
TRP3YKL211C HAP5Q02516 242 aa8.14□□□□□ -1.11
TRP3YKL211C YDR344CQ05510 147 aa8.14□□□□□ -1.11
TRP3YKL211C YGR273CP53329 174 aa8.13□□□□□ -1.11
TRP3YKL211C BNI4P53858 892 aa8.1□□□□□ -1.11
TRP3YKL211C DPS1P04802 557 aaKnown RBP8.07□□□□□ -1.12
TRP3YKL211C PTC2P39966 464 aaKnown RBP8.06□□□□□ -1.12
TRP3YKL211C YML082WQ04533 649 aaKnown RBP8.06□□□□□ -1.12
TRP3YKL211C ILV3P39522 585 aaKnown RBP8.06□□□□□ -1.12
TRP3YKL211C MPC54Q08550 464 aa8.05□□□□□ -1.12
TRP3YKL211C NOP2P40991 618 aaKnown RBP8.01□□□□□ -1.13
TRP3YKL211C NMA111P53920 997 aa8.01□□□□□ -1.13
TRP3YKL211C DPL1Q05567 589 aa8.01□□□□□ -1.13
TRP3YKL211C TCB3Q03640 1545 aaKnown RBP8.01□□□□□ -1.13
TRP3YKL211C SLI15P38283 698 aa8□□□□□ -1.13
TRP3YKL211C CHD1P32657 1468 aa7.97□□□□□ -1.13
TRP3YKL211C SET1P38827 1080 aaKnown RBP7.96□□□□□ -1.13
TRP3YKL211C KEX1P09620 729 aa7.94□□□□□ -1.14
TRP3YKL211C ISU2Q12056 156 aa7.94□□□□□ -1.14
TRP3YKL211C RPP1BP10622 106 aaKnown RBP7.91□□□□□ -1.14
TRP3YKL211C MMS22Q06164 1454 aa7.89□□□□□ -1.15
TRP3YKL211C IFH1P39520 1085 aa7.87□□□□□ -1.15
TRP3YKL211C UBP14P38237 781 aaKnown RBP7.85□□□□□ -1.15
TRP3YKL211C YLR326WQ06170 240 aaKnown RBP7.85□□□□□ -1.15
TRP3YKL211C RAD54P32863 898 aa7.83□□□□□ -1.16
TRP3YKL211C VHR2P40041 505 aa7.82□□□□□ -1.16
TRP3YKL211C CDC73Q06697 393 aa7.82□□□□□ -1.16
TRP3YKL211C SAS4Q04003 481 aa7.81□□□□□ -1.16
TRP3YKL211C GYP1Q08484 637 aa7.81□□□□□ -1.16
TRP3YKL211C XRN1P22147 1528 aaKnown RBP7.81□□□□□ -1.16
TRP3YKL211C RAM1P22007 431 aa7.81□□□□□ -1.16
TRP3YKL211C PCS60P38137 543 aaKnown RBP RIP-Chip data7.8□□□□□ -1.16not detected
TRP3YKL211C YPR015CQ12531 247 aa7.79□□□□□ -1.16
TRP3YKL211C KIC1P38692 1080 aa7.78□□□□□ -1.16
TRP3YKL211C SRC1Q03707 834 aa7.78□□□□□ -1.16
TRP3YKL211C TY1B-DR4Q07793 1604 aa7.78□□□□□ -1.16
TRP3YKL211C HSL1P34244 1518 aa7.77□□□□□ -1.17
TRP3YKL211C SPT6P23615 1451 aaKnown RBP7.74□□□□□ -1.17
TRP3YKL211C UFD4P33202 1483 aa7.74□□□□□ -1.17
TRP3YKL211C AMS1P22855 1083 aa7.73□□□□□ -1.17
TRP3YKL211C PEX21P50091 288 aa7.73□□□□□ -1.17
TRP3YKL211C RAS1P01119 309 aa7.72□□□□□ -1.17
TRP3YKL211C MRF1P30775 413 aaPredicted RBP7.72□□□□□ -1.17
TRP3YKL211C PDR1P12383 1068 aa7.71□□□□□ -1.18
TRP3YKL211C THO2P53552 1597 aaKnown RBP7.7□□□□□ -1.18
TRP3YKL211C YEL077CQ3E7X8 1277 aa7.7□□□□□ -1.18
TRP3YKL211C REF2P42073 533 aaPredicted RBP7.68□□□□□ -1.18
TRP3YKL211C YDR090CQ03193 310 aa7.68□□□□□ -1.18
TRP3YKL211C CSC1Q06538 782 aa7.68□□□□□ -1.18
TRP3YKL211C TFB4Q12004 338 aa7.68□□□□□ -1.18
TRP3YKL211C SPP41P38904 1435 aa7.67□□□□□ -1.18
TRP3YKL211C YPR148CQ06523 435 aa7.67□□□□□ -1.18
TRP3YKL211C SIN3P22579 1536 aa7.66□□□□□ -1.18
TRP3YKL211C TRK1P12685 1235 aa7.66□□□□□ -1.18
TRP3YKL211C HIR3P47171 1648 aa7.65□□□□□ -1.18
TRP3YKL211C YRR1Q12172 810 aa7.64□□□□□ -1.19
TRP3YKL211C REV3P14284 1504 aa7.64□□□□□ -1.19
TRP3YKL211C PRT1P06103 763 aaKnown RBP7.63□□□□□ -1.19
TRP3YKL211C MAK21Q12176 1025 aaKnown RBP7.63□□□□□ -1.19
TRP3YKL211C GAP1P19145 602 aaPredicted RBP7.62□□□□□ -1.19
TRP3YKL211C ENP1P38333 483 aaKnown RBP7.62□□□□□ -1.19
TRP3YKL211C YTA7P40340 1379 aa7.62□□□□□ -1.19
TRP3YKL211C IKI3Q06706 1349 aaKnown RBP7.61□□□□□ -1.19
TRP3YKL211C TAF2P23255 1407 aa7.61□□□□□ -1.19
TRP3YKL211C NPL4P33755 580 aa7.61□□□□□ -1.19
TRP3YKL211C BUD20Q08004 166 aaPredicted RBP7.61□□□□□ -1.19
TRP3YKL211C MYO2P19524 1574 aaKnown RBP7.61□□□□□ -1.19
TRP3YKL211C SSK2P53599 1579 aa7.61□□□□□ -1.19
TRP3YKL211C STU1P38198 1513 aa7.6□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 47.2 ms