RNA–Protein interactions for RNA: YJR028W

YJR028W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YJR028W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YJR028WYJR028W VMA1P17255 1071 aaKnown RBP7.88□□□□□ -1.15
YJR028WYJR028W YDR090CQ03193 310 aa7.88□□□□□ -1.15
YJR028WYJR028W UBP14P38237 781 aaKnown RBP7.87□□□□□ -1.15
YJR028WYJR028W PIB1Q06651 286 aa7.86□□□□□ -1.15
YJR028WYJR028W SAM3Q08986 587 aa7.83□□□□□ -1.16
YJR028WYJR028W GUA1P38625 525 aaKnown RBP7.82□□□□□ -1.16
YJR028WYJR028W VHR2P40041 505 aa7.82□□□□□ -1.16
YJR028WYJR028W YLR326WQ06170 240 aaKnown RBP7.82□□□□□ -1.16
YJR028WYJR028W GUT1P32190 709 aa7.81□□□□□ -1.16
YJR028WYJR028W GRE2Q12068 342 aaKnown RBP7.8□□□□□ -1.16
YJR028WYJR028W ATH1P48016 1211 aa7.79□□□□□ -1.16
YJR028WYJR028W YGR273CP53329 174 aa7.79□□□□□ -1.16
YJR028WYJR028W SOL3P38858 249 aa7.78□□□□□ -1.16
YJR028WYJR028W MST1P07236 462 aa7.78□□□□□ -1.16
YJR028WYJR028W ATF2P53296 535 aa7.78□□□□□ -1.16
YJR028WYJR028W HPC2Q01448 625 aa7.76□□□□□ -1.17
YJR028WYJR028W NST1P53935 1240 aa7.75□□□□□ -1.17
YJR028WYJR028W KEX1P09620 729 aa7.73□□□□□ -1.17
YJR028WYJR028W PCS60P38137 543 aaKnown RBP RIP-Chip data7.73□□□□□ -1.17not detected
YJR028WYJR028W HGH1P48362 394 aaKnown RBP7.73□□□□□ -1.17
YJR028WYJR028W PSE1P32337 1089 aaKnown RBP7.72□□□□□ -1.17
YJR028WYJR028W GYP5Q12344 894 aa7.72□□□□□ -1.17
YJR028WYJR028W RAD54P32863 898 aa7.71□□□□□ -1.18
YJR028WYJR028W ORC6P38826 435 aa7.69□□□□□ -1.18
YJR028WYJR028W KIC1P38692 1080 aa7.68□□□□□ -1.18
YJR028WYJR028W TFB3Q03290 321 aa7.67□□□□□ -1.18
YJR028WYJR028W ILV3P39522 585 aaKnown RBP7.64□□□□□ -1.19
YJR028WYJR028W YOL036WQ08206 761 aa7.64□□□□□ -1.19
YJR028WYJR028W DCW1P36091 449 aa7.63□□□□□ -1.19
YJR028WYJR028W MPH3P0CE00 602 aa7.62□□□□□ -1.19
YJR028WYJR028W PKC1P24583 1151 aa7.61□□□□□ -1.19
YJR028WYJR028W GTT3P39996 337 aa7.61□□□□□ -1.19
YJR028WYJR028W CSN12P47130 423 aa7.61□□□□□ -1.19
YJR028WYJR028W AI4P03878 556 aa7.6□□□□□ -1.19
YJR028WYJR028W SSA2P10592 639 aaKnown RBP7.6□□□□□ -1.19
YJR028WYJR028W GAP1P19145 602 aaPredicted RBP7.59□□□□□ -1.19
YJR028WYJR028W RGR1P19263 1082 aa7.59□□□□□ -1.19
YJR028WYJR028W KTR1P27810 393 aaKnown RBP7.59□□□□□ -1.19
YJR028WYJR028W BRL1P38770 471 aa7.58□□□□□ -1.2
YJR028WYJR028W SET4P42948 560 aa7.57□□□□□ -1.2
YJR028WYJR028W TEA1P47988 759 aa7.57□□□□□ -1.2
YJR028WYJR028W HTA1P04911 132 aaKnown RBP7.56□□□□□ -1.2
YJR028WYJR028W HTA2P04912 132 aa7.56□□□□□ -1.2
YJR028WYJR028W MVP1P40959 511 aaKnown RBP7.55□□□□□ -1.2
YJR028WYJR028W MSB4Q12317 492 aa7.55□□□□□ -1.2
YJR028WYJR028W GLN1P32288 370 aaKnown RBP7.54□□□□□ -1.2
YJR028WYJR028W CLB5P30283 435 aa7.52□□□□□ -1.2
YJR028WYJR028W SLI15P38283 698 aa7.52□□□□□ -1.2
YJR028WYJR028W DAN4P47179 1161 aa7.52□□□□□ -1.2
YJR028WYJR028W BIM1P40013 344 aa7.52□□□□□ -1.21
YJR028WYJR028W TYW1Q08960 810 aaKnown RBP7.52□□□□□ -1.21
YJR028WYJR028W CSC1Q06538 782 aa7.51□□□□□ -1.21
YJR028WYJR028W YBL029C-AQ3E756 94 aa7.51□□□□□ -1.21
YJR028WYJR028W ATG32P40458 529 aa7.5□□□□□ -1.21
YJR028WYJR028W NIS1P53939 407 aa7.5□□□□□ -1.21
YJR028WYJR028W YEL023CP39992 682 aa7.49□□□□□ -1.21
YJR028WYJR028W YJL007CP47080 104 aa7.49□□□□□ -1.21
YJR028WYJR028W HST2P53686 357 aa7.49□□□□□ -1.21
YJR028WYJR028W FPK1P53739 893 aa7.48□□□□□ -1.21
YJR028WYJR028W YPR109WQ06104 294 aa7.47□□□□□ -1.21
YJR028WYJR028W CDC73Q06697 393 aa7.47□□□□□ -1.21
YJR028WYJR028W SUB2Q07478 446 aaKnown RBP7.47□□□□□ -1.21
YJR028WYJR028W TFB4Q12004 338 aa7.46□□□□□ -1.22
YJR028WYJR028W SIT4P20604 311 aa7.45□□□□□ -1.22
YJR028WYJR028W PTC4P38089 393 aa7.45□□□□□ -1.22
YJR028WYJR028W EAP1P36041 632 aaKnown RBP7.44□□□□□ -1.22
YJR028WYJR028W TRP5P00931 707 aaKnown RBP7.43□□□□□ -1.22
YJR028WYJR028W RPP1BP10622 106 aaKnown RBP7.43□□□□□ -1.22
YJR028WYJR028W WSC3Q12215 556 aa7.43□□□□□ -1.22
YJR028WYJR028W MMP1Q12372 583 aa7.43□□□□□ -1.22
YJR028WYJR028W BIO2P32451 375 aa7.42□□□□□ -1.22
YJR028WYJR028W YBL036CP38197 257 aa7.42□□□□□ -1.22
YJR028WYJR028W TIF1P10081 395 aaKnown RBP7.41□□□□□ -1.22
YJR028WYJR028W SCJ1P25303 377 aa7.41□□□□□ -1.22
YJR028WYJR028W JIP4Q03361 876 aa7.41□□□□□ -1.22
YJR028WYJR028W RAD59Q12223 238 aa7.41□□□□□ -1.22
YJR028WYJR028W ERG12P07277 443 aa7.4□□□□□ -1.22
YJR028WYJR028W SSA1P10591 642 aaKnown RBP7.4□□□□□ -1.22
YJR028WYJR028W ESS1P22696 170 aa7.4□□□□□ -1.22
YJR028WYJR028W YMR196WQ04336 1088 aa7.4□□□□□ -1.22
YJR028WYJR028W YJU3P28321 313 aa7.39□□□□□ -1.23
YJR028WYJR028W CSE4P36012 229 aa7.39□□□□□ -1.23
YJR028WYJR028W VNX1P42839 908 aa7.39□□□□□ -1.23
YJR028WYJR028W PKH3Q03306 898 aaPredicted RBP7.39□□□□□ -1.23
YJR028WYJR028W GEF1P37020 779 aa7.37□□□□□ -1.23
YJR028WYJR028W RSC30P38781 883 aa7.36□□□□□ -1.23
YJR028WYJR028W RPL34BP40525 121 aaKnown RBP7.36□□□□□ -1.23
YJR028WYJR028W TUM1Q08686 304 aaKnown RBP7.36□□□□□ -1.23
YJR028WYJR028W SUP45P12385 437 aaKnown RBP7.35□□□□□ -1.23
YJR028WYJR028W TTI1P36097 1038 aa7.35□□□□□ -1.23
YJR028WYJR028W DPL1Q05567 589 aa7.35□□□□□ -1.23
YJR028WYJR028W NOP8Q08287 484 aaPredicted RBP7.35□□□□□ -1.23
YJR028WYJR028W IOC2Q12072 812 aa7.35□□□□□ -1.23
YJR028WYJR028W SSA4P22202 642 aaKnown RBP7.34□□□□□ -1.23
YJR028WYJR028W TIF11P38912 153 aaKnown RBP7.34□□□□□ -1.23
YJR028WYJR028W MID1P41821 548 aa7.34□□□□□ -1.23
YJR028WYJR028W ULI1P43604 169 aa7.34□□□□□ -1.23
YJR028WYJR028W PEX21P50091 288 aa7.34□□□□□ -1.23
YJR028WYJR028W YML020WQ03722 664 aa7.33□□□□□ -1.24
YJR028WYJR028W MPC54Q08550 464 aa7.33□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms