RNA–Protein interactions for RNA: YJR028W

YJR028W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YJR028W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YJR028WYJR028W DRS1P32892 752 aaKnown RBP12.95□□□□□ -0.34
YJR028WYJR028W MTC1P47018 478 aaKnown RBP12.48□□□□□ -0.41
YJR028WYJR028W BFR2Q06631 534 aaKnown RBP11.4□□□□□ -0.58
YJR028WYJR028W FAP1P53971 965 aa11.24□□□□□ -0.61
YJR028WYJR028W TFA1P36100 482 aa11.14□□□□□ -0.63
YJR028WYJR028W AVT3P36062 692 aa10.94□□□□□ -0.66
YJR028WYJR028W DIP2Q12220 943 aaPredicted RBP10.88□□□□□ -0.67
YJR028WYJR028W PRY3P47033 881 aa10.61□□□□□ -0.71
YJR028WYJR028W RSE1Q04693 1361 aaKnown RBP10.14□□□□□ -0.79
YJR028WYJR028W AAD16Q02895 342 aa10.07□□□□□ -0.8
YJR028WYJR028W YCK3P39962 524 aa10.01□□□□□ -0.81
YJR028WYJR028W PRI1P10363 409 aa9.99□□□□□ -0.81
YJR028WYJR028W ISW2Q08773 1120 aa9.99□□□□□ -0.81
YJR028WYJR028W HAA1Q12753 694 aaKnown RBP9.94□□□□□ -0.82
YJR028WYJR028W RPG1P38249 964 aaKnown RBP9.86□□□□□ -0.83
YJR028WYJR028W RQC2Q12532 1038 aaKnown RBP9.8□□□□□ -0.84
YJR028WYJR028W RPL17AP05740 184 aaKnown RBP9.73□□□□□ -0.85
YJR028WYJR028W RPL17BP46990 184 aaKnown RBP9.73□□□□□ -0.85
YJR028WYJR028W REB1P21538 810 aa9.51□□□□□ -0.89
YJR028WYJR028W SPT21P35209 758 aa9.5□□□□□ -0.89
YJR028WYJR028W RIM101P33400 625 aa9.46□□□□□ -0.9
YJR028WYJR028W TSR3Q12094 313 aaKnown RBP9.33□□□□□ -0.92
YJR028WYJR028W PTP3P40048 928 aa9.31□□□□□ -0.92
YJR028WYJR028W DMA1P38823 416 aa9.31□□□□□ -0.92
YJR028WYJR028W SSP1P38871 571 aa9.2□□□□□ -0.94
YJR028WYJR028W OXP1P28273 1286 aa9.19□□□□□ -0.94
YJR028WYJR028W YKR023WP36119 530 aaKnown RBP9.07□□□□□ -0.96
YJR028WYJR028W MRPL32P25348 183 aa9.01□□□□□ -0.97
YJR028WYJR028W YLR271WQ06152 274 aa9□□□□□ -0.97
YJR028WYJR028W YAH1Q12184 172 aaKnown RBP9□□□□□ -0.97
YJR028WYJR028W YGL015CP33199 130 aa8.98□□□□□ -0.97
YJR028WYJR028W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.96□□□□□ -0.98not detected
YJR028WYJR028W YIL055CP40523 627 aaKnown RBP8.93□□□□□ -0.98
YJR028WYJR028W TFC8Q12308 588 aa8.87□□□□□ -0.99
YJR028WYJR028W RSM7P47150 247 aa8.86□□□□□ -0.99
YJR028WYJR028W HOP09932 586 aa8.82□□□□□ -1
YJR028WYJR028W MGA2P40578 1113 aa8.82□□□□□ -1
YJR028WYJR028W BUD31P25337 157 aaPredicted RBP8.77□□□□□ -1.01
YJR028WYJR028W TAF7Q05021 590 aa8.76□□□□□ -1.01
YJR028WYJR028W SAS10Q12136 610 aaPredicted RBP8.76□□□□□ -1.01
YJR028WYJR028W CDC27P38042 758 aa8.75□□□□□ -1.01
YJR028WYJR028W DCD1P06773 312 aa8.74□□□□□ -1.01
YJR028WYJR028W LEO1P38439 464 aa8.74□□□□□ -1.01
YJR028WYJR028W CST9Q06032 482 aa8.74□□□□□ -1.01
YJR028WYJR028W PSD2P53037 1138 aaKnown RBP8.73□□□□□ -1.01
YJR028WYJR028W AI2P03876 854 aa8.66□□□□□ -1.02
YJR028WYJR028W BCH2P36122 765 aa8.62□□□□□ -1.03
YJR028WYJR028W LEU3P08638 886 aa8.6□□□□□ -1.03
YJR028WYJR028W BBC1P47068 1157 aa8.53□□□□□ -1.04
YJR028WYJR028W RAM2P29703 316 aa8.51□□□□□ -1.05
YJR028WYJR028W EPS1P40557 701 aa8.5□□□□□ -1.05
YJR028WYJR028W BDF1P35817 686 aa8.43□□□□□ -1.06
YJR028WYJR028W MRM1P25270 412 aa8.41□□□□□ -1.06
YJR028WYJR028W RCR1P38212 213 aa8.41□□□□□ -1.06
YJR028WYJR028W YPR148CQ06523 435 aa8.39□□□□□ -1.07
YJR028WYJR028W SET1P38827 1080 aaKnown RBP8.38□□□□□ -1.07
YJR028WYJR028W SCY1P53009 804 aa8.34□□□□□ -1.07
YJR028WYJR028W RTG3P38165 486 aa8.32□□□□□ -1.08
YJR028WYJR028W UBP10P53874 792 aaPredicted RBP8.3□□□□□ -1.08
YJR028WYJR028W MAK11P20484 414 aaKnown RBP8.29□□□□□ -1.08
YJR028WYJR028W MAP2P38174 421 aaKnown RBP8.29□□□□□ -1.08
YJR028WYJR028W RPN1P38764 993 aaKnown RBP8.29□□□□□ -1.08
YJR028WYJR028W CKB1P43639 278 aa8.29□□□□□ -1.08
YJR028WYJR028W IFH1P39520 1085 aa8.28□□□□□ -1.08
YJR028WYJR028W VPS70P47161 811 aa8.28□□□□□ -1.08
YJR028WYJR028W VPS29P38759 282 aa8.27□□□□□ -1.09
YJR028WYJR028W SPB4P25808 606 aaPredicted RBP8.22□□□□□ -1.09
YJR028WYJR028W SIS1P25294 352 aaKnown RBP8.21□□□□□ -1.1
YJR028WYJR028W COQ8P27697 501 aa8.18□□□□□ -1.1
YJR028WYJR028W DSF2P38213 736 aa8.17□□□□□ -1.1
YJR028WYJR028W NOP53Q12080 455 aaKnown RBP8.16□□□□□ -1.1
YJR028WYJR028W SLX5P32828 619 aaKnown RBP8.15□□□□□ -1.1
YJR028WYJR028W DMA2P53924 522 aa8.14□□□□□ -1.11
YJR028WYJR028W STS1P38637 319 aa8.12□□□□□ -1.11
YJR028WYJR028W YMR1P47147 688 aaKnown RBP RIP-Chip data8.12□□□□□ -1.11not detected
YJR028WYJR028W EDS1P38073 919 aa8.11□□□□□ -1.11
YJR028WYJR028W PBS2P08018 668 aa8.1□□□□□ -1.11
YJR028WYJR028W UBP9P39967 754 aa8.06□□□□□ -1.12
YJR028WYJR028W DBP1P24784 617 aaKnown RBP8.05□□□□□ -1.12
YJR028WYJR028W YNR021WP53723 404 aaKnown RBP8.05□□□□□ -1.12
YJR028WYJR028W MIF2P35201 549 aa8.03□□□□□ -1.12
YJR028WYJR028W REF2P42073 533 aaPredicted RBP8.03□□□□□ -1.12
YJR028WYJR028W YFR006WP43590 535 aa8.03□□□□□ -1.12
YJR028WYJR028W ABP1P15891 592 aaKnown RBP8.01□□□□□ -1.13
YJR028WYJR028W NSR1P27476 414 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13not detected
YJR028WYJR028W YOR238WQ08634 303 aa8□□□□□ -1.13
YJR028WYJR028W PTC3P34221 468 aaKnown RBP7.99□□□□□ -1.13
YJR028WYJR028W MAM3Q12296 706 aa7.99□□□□□ -1.13
YJR028WYJR028W KIN1P13185 1064 aa7.98□□□□□ -1.13
YJR028WYJR028W NUP42P49686 430 aaKnown RBP7.98□□□□□ -1.13
YJR028WYJR028W TIF4632P39936 914 aaKnown RBP7.96□□□□□ -1.14
YJR028WYJR028W IES2P40154 320 aa7.96□□□□□ -1.14
YJR028WYJR028W AIM7Q12156 149 aa7.96□□□□□ -1.14
YJR028WYJR028W DIT2P21595 489 aa7.95□□□□□ -1.14
YJR028WYJR028W MAK21Q12176 1025 aaKnown RBP7.95□□□□□ -1.14
YJR028WYJR028W COX6P00427 148 aa7.94□□□□□ -1.14
YJR028WYJR028W GLC3P32775 704 aa7.94□□□□□ -1.14
YJR028WYJR028W TGL3P40308 642 aa7.94□□□□□ -1.14
YJR028WYJR028W YAP5P40574 245 aa7.89□□□□□ -1.15
YJR028WYJR028W RLF2Q12495 606 aa7.89□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms