RNA–Protein interactions for RNA: YJL090C

DPB11, Transcript of DNA replication initiation protein, yeast

Gene DPB11, Length 2,295 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DPB11	YJL090C	HTA1	P04911	132 aa	Known RBP	5.23	□□□□□ -1.57
DPB11	YJL090C	HTA2	P04912	132 aa		5.23	□□□□□ -1.57
DPB11	YJL090C	EAP1	P36041	632 aa	Known RBP	5.22	□□□□□ -1.57
DPB11	YJL090C	YGR273C	P53329	174 aa		5.21	□□□□□ -1.58
DPB11	YJL090C	SPP1	Q03012	353 aa		5.21	□□□□□ -1.58
DPB11	YJL090C	DSF2	P38213	736 aa		5.2	□□□□□ -1.58
DPB11	YJL090C	SOL3	P38858	249 aa		5.2	□□□□□ -1.58
DPB11	YJL090C	TIF11	P38912	153 aa	Known RBP	5.2	□□□□□ -1.58
DPB11	YJL090C	VHR2	P40041	505 aa		5.2	□□□□□ -1.58
DPB11	YJL090C	ULI1	P43604	169 aa		5.19	□□□□□ -1.58
DPB11	YJL090C	TRP5	P00931	707 aa	Known RBP	5.18	□□□□□ -1.58
DPB11	YJL090C	UBP14	P38237	781 aa	Known RBP	5.18	□□□□□ -1.58
DPB11	YJL090C	LEO1	P38439	464 aa		5.18	□□□□□ -1.58
DPB11	YJL090C	MAK21	Q12176	1025 aa	Known RBP	5.18	□□□□□ -1.58
DPB11	YJL090C	YEL023C	P39992	682 aa		5.17	□□□□□ -1.58
DPB11	YJL090C	COX6	P00427	148 aa		5.17	□□□□□ -1.58
DPB11	YJL090C	YLR326W	Q06170	240 aa	Known RBP	5.17	□□□□□ -1.58
DPB11	YJL090C	MAM3	Q12296	706 aa		5.17	□□□□□ -1.58
DPB11	YJL090C	NST1	P53935	1240 aa		5.16	□□□□□ -1.58
DPB11	YJL090C	KEX1	P09620	729 aa		5.15	□□□□□ -1.58
DPB11	YJL090C	YDR090C	Q03193	310 aa		5.15	□□□□□ -1.58
DPB11	YJL090C	PTC4	P38089	393 aa		5.14	□□□□□ -1.59
DPB11	YJL090C	KIC1	P38692	1080 aa		5.14	□□□□□ -1.59
DPB11	YJL090C	IOC2	Q12072	812 aa		5.14	□□□□□ -1.59
DPB11	YJL090C	MPH3	P0CE00	602 aa		5.14	□□□□□ -1.59
DPB11	YJL090C	AI4	P03878	556 aa		5.13	□□□□□ -1.59
DPB11	YJL090C	IES2	P40154	320 aa		5.13	□□□□□ -1.59
DPB11	YJL090C	JIP4	Q03361	876 aa		5.13	□□□□□ -1.59
DPB11	YJL090C	RAD54	P32863	898 aa		5.13	□□□□□ -1.59
DPB11	YJL090C	RPN1	P38764	993 aa	Known RBP	5.13	□□□□□ -1.59
DPB11	YJL090C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	RIP-Chip
DPB11	YJL090C	LDB19	Q12502	818 aa		5.12	□□□□□ -1.59
DPB11	YJL090C	DAN4	P47179	1161 aa		5.12	□□□□□ -1.59
DPB11	YJL090C	YNL035C	P53962	389 aa	Known RBP	5.11	□□□□□ -1.59
DPB11	YJL090C	ILV3	P39522	585 aa	Known RBP	5.1	□□□□□ -1.59
DPB11	YJL090C	NUP42	P49686	430 aa	Known RBP	5.09	□□□□□ -1.59
DPB11	YJL090C	DIT2	P21595	489 aa		5.09	□□□□□ -1.59
DPB11	YJL090C	RTG1	P32607	177 aa		5.09	□□□□□ -1.59
DPB11	YJL090C	YNR021W	P53723	404 aa	Known RBP	5.08	□□□□□ -1.6
DPB11	YJL090C	SEC61	P32915	480 aa		5.07	□□□□□ -1.6
DPB11	YJL090C	SLI15	P38283	698 aa		5.07	□□□□□ -1.6
DPB11	YJL090C	AIR2	Q12476	344 aa	Known RBP	5.06	□□□□□ -1.6
DPB11	YJL090C	TFG1	P41895	735 aa	Predicted RBP	5.06	□□□□□ -1.6
DPB11	YJL090C	PML39	Q03760	334 aa		5.06	□□□□□ -1.6
DPB11	YJL090C	GLC3	P32775	704 aa		5.05	□□□□□ -1.6
DPB11	YJL090C	YJL171C	P46992	396 aa		5.05	□□□□□ -1.6
DPB11	YJL090C	NCR1	Q12200	1170 aa		5.05	□□□□□ -1.6
DPB11	YJL090C	MID1	P41821	548 aa		5.03	□□□□□ -1.6
DPB11	YJL090C	RPP1B	P10622	106 aa	Known RBP	5.03	□□□□□ -1.6
DPB11	YJL090C	ATF2	P53296	535 aa		5.03	□□□□□ -1.6
DPB11	YJL090C	ORC6	P38826	435 aa		5.02	□□□□□ -1.61
DPB11	YJL090C	FKH1	P40466	484 aa		5.02	□□□□□ -1.61
DPB11	YJL090C	PSE1	P32337	1089 aa	Known RBP	5.02	□□□□□ -1.61
DPB11	YJL090C	AIM7	Q12156	149 aa		5.02	□□□□□ -1.61
DPB11	YJL090C	CDC73	Q06697	393 aa		5.01	□□□□□ -1.61
DPB11	YJL090C	KIN1	P13185	1064 aa		5	□□□□□ -1.61
DPB11	YJL090C	YDL129W	Q07555	291 aa		5	□□□□□ -1.61
DPB11	YJL090C	PEX29	Q03370	554 aa		5	□□□□□ -1.61
DPB11	YJL090C	MVP1	P40959	511 aa	Known RBP	4.99	□□□□□ -1.61
DPB11	YJL090C	DPL1	Q05567	589 aa		4.99	□□□□□ -1.61
DPB11	YJL090C	CSC1	Q06538	782 aa		4.99	□□□□□ -1.61
DPB11	YJL090C	MPC54	Q08550	464 aa		4.99	□□□□□ -1.61
DPB11	YJL090C	RGR1	P19263	1082 aa		4.98	□□□□□ -1.61
DPB11	YJL090C	GAP1	P19145	602 aa	Predicted RBP	4.98	□□□□□ -1.61
DPB11	YJL090C	PEX21	P50091	288 aa		4.98	□□□□□ -1.61
DPB11	YJL090C	SAP30	P38429	201 aa		4.97	□□□□□ -1.61
DPB11	YJL090C	TEA1	P47988	759 aa		4.96	□□□□□ -1.62
DPB11	YJL090C	TFB4	Q12004	338 aa		4.96	□□□□□ -1.62
DPB11	YJL090C	NMA111	P53920	997 aa		4.95	□□□□□ -1.62
DPB11	YJL090C	YPR109W	Q06104	294 aa		4.95	□□□□□ -1.62
DPB11	YJL090C	ISU2	Q12056	156 aa		4.95	□□□□□ -1.62
DPB11	YJL090C	TUM1	Q08686	304 aa	Known RBP	4.94	□□□□□ -1.62
DPB11	YJL090C	CLB5	P30283	435 aa		4.94	□□□□□ -1.62
DPB11	YJL090C	BMT6	Q12291	365 aa		4.93	□□□□□ -1.62
DPB11	YJL090C	HAP5	Q02516	242 aa		4.92	□□□□□ -1.62
DPB11	YJL090C	YRR1	Q12172	810 aa		4.92	□□□□□ -1.62
DPB11	YJL090C	ARH1	P48360	493 aa		4.92	□□□□□ -1.62
DPB11	YJL090C	DMA2	P53924	522 aa		4.91	□□□□□ -1.62
DPB11	YJL090C	GUA1	P38625	525 aa	Known RBP	4.9	□□□□□ -1.62
DPB11	YJL090C	ELP4	Q02884	456 aa	Known RBP	4.9	□□□□□ -1.62
DPB11	YJL090C	YDR344C	Q05510	147 aa		4.9	□□□□□ -1.62
DPB11	YJL090C	NIS1	P53939	407 aa		4.89	□□□□□ -1.63
DPB11	YJL090C	CSN12	P47130	423 aa		4.88	□□□□□ -1.63
DPB11	YJL090C	YMR196W	Q04336	1088 aa		4.88	□□□□□ -1.63
DPB11	YJL090C	PDR1	P12383	1068 aa		4.86	□□□□□ -1.63
DPB11	YJL090C	FPK1	P53739	893 aa		4.86	□□□□□ -1.63
DPB11	YJL090C	BNI4	P53858	892 aa		4.86	□□□□□ -1.63
DPB11	YJL090C	SPT23	P35210	1082 aa		4.86	□□□□□ -1.63
DPB11	YJL090C	PRE3	P38624	215 aa		4.86	□□□□□ -1.63
DPB11	YJL090C	SSA2	P10592	639 aa	Known RBP	4.85	□□□□□ -1.63
DPB11	YJL090C	NUD1	P32336	851 aa		4.85	□□□□□ -1.63
DPB11	YJL090C	TYW1	Q08960	810 aa	Known RBP	4.85	□□□□□ -1.63
DPB11	YJL090C	HGH1	P48362	394 aa	Known RBP	4.85	□□□□□ -1.63
DPB11	YJL090C	TAF7	Q05021	590 aa		4.85	□□□□□ -1.63
DPB11	YJL090C	SIT4	P20604	311 aa		4.84	□□□□□ -1.63
DPB11	YJL090C	CHL1	P22516	861 aa	Predicted RBP	4.84	□□□□□ -1.63
DPB11	YJL090C	GLN1	P32288	370 aa	Known RBP	4.84	□□□□□ -1.63
DPB11	YJL090C	NPL4	P33755	580 aa		4.84	□□□□□ -1.63
DPB11	YJL090C	PTC2	P39966	464 aa	Known RBP	4.84	□□□□□ -1.63
DPB11	YJL090C	HPC2	Q01448	625 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms