RNA–Protein interactions for RNA: YHR121W

LSM12, Transcript of Protein of unknown function that may function in RNA processing, yeastyeast

Gene LSM12, Length 564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM12YHR121W RTG1P32607 177 aa11.94□□□□□ -0.5
LSM12YHR121W JIP4Q03361 876 aa11.94□□□□□ -0.5
LSM12YHR121W AIR2Q12476 344 aaKnown RBP11.93□□□□□ -0.5
LSM12YHR121W YEL023CP39992 682 aa11.91□□□□□ -0.5
LSM12YHR121W SEC61P32915 480 aa11.9□□□□□ -0.5
LSM12YHR121W YJL171CP46992 396 aa11.88□□□□□ -0.51
LSM12YHR121W PTC4P38089 393 aa11.87□□□□□ -0.51
LSM12YHR121W DMA1P38823 416 aa11.86□□□□□ -0.51
LSM12YHR121W NCR1Q12200 1170 aa11.86□□□□□ -0.51
LSM12YHR121W TFG1P41895 735 aaPredicted RBP11.85□□□□□ -0.51
LSM12YHR121W IFH1P39520 1085 aa11.83□□□□□ -0.52
LSM12YHR121W DAN4P47179 1161 aa11.83□□□□□ -0.52
LSM12YHR121W RQC2Q12532 1038 aaKnown RBP11.8□□□□□ -0.52
LSM12YHR121W BMT6Q12291 365 aa11.78□□□□□ -0.52
LSM12YHR121W SOL3P38858 249 aa11.73□□□□□ -0.53
LSM12YHR121W YGR273CP53329 174 aa11.73□□□□□ -0.53
LSM12YHR121W NST1P53935 1240 aa11.72□□□□□ -0.53
LSM12YHR121W AI4P03878 556 aa11.7□□□□□ -0.54
LSM12YHR121W YDL129WQ07555 291 aa11.7□□□□□ -0.54
LSM12YHR121W MPH3P0CE00 602 aa11.68□□□□□ -0.54
LSM12YHR121W YPR148CQ06523 435 aa11.68□□□□□ -0.54
LSM12YHR121W SAP30P38429 201 aa11.65□□□□□ -0.54
LSM12YHR121W PML39Q03760 334 aa11.64□□□□□ -0.55
LSM12YHR121W VPS70P47161 811 aa11.6□□□□□ -0.55
LSM12YHR121W ILV3P39522 585 aaKnown RBP11.58□□□□□ -0.56
LSM12YHR121W KEX1P09620 729 aa11.55□□□□□ -0.56
LSM12YHR121W VHR2P40041 505 aa11.55□□□□□ -0.56
LSM12YHR121W PEX29Q03370 554 aa11.52□□□□□ -0.57
LSM12YHR121W UBP14P38237 781 aaKnown RBP11.51□□□□□ -0.57
LSM12YHR121W MID1P41821 548 aa11.51□□□□□ -0.57
LSM12YHR121W REF2P42073 533 aaPredicted RBP11.51□□□□□ -0.57
LSM12YHR121W YLR326WQ06170 240 aaKnown RBP11.51□□□□□ -0.57
LSM12YHR121W SAS10Q12136 610 aaPredicted RBP11.5□□□□□ -0.57
LSM12YHR121W CKB1P43639 278 aa11.48□□□□□ -0.57
LSM12YHR121W RAD54P32863 898 aa11.46□□□□□ -0.57
LSM12YHR121W SLI15P38283 698 aa11.46□□□□□ -0.57
LSM12YHR121W PRE3P38624 215 aa11.44□□□□□ -0.58
LSM12YHR121W KIC1P38692 1080 aa11.44□□□□□ -0.58
LSM12YHR121W CHL1P22516 861 aaPredicted RBP11.43□□□□□ -0.58
LSM12YHR121W ELP4Q02884 456 aaKnown RBP11.42□□□□□ -0.58
LSM12YHR121W PCS60P38137 543 aaKnown RBP RIP-Chip data11.4□□□□□ -0.58not detected
LSM12YHR121W ARH1P48360 493 aa11.4□□□□□ -0.58
LSM12YHR121W MAK21Q12176 1025 aaKnown RBP11.4□□□□□ -0.58
LSM12YHR121W YDR090CQ03193 310 aa11.39□□□□□ -0.59
LSM12YHR121W MPC54Q08550 464 aa11.39□□□□□ -0.59
LSM12YHR121W RPP1BP10622 106 aaKnown RBP11.36□□□□□ -0.59
LSM12YHR121W DPL1Q05567 589 aa11.36□□□□□ -0.59
LSM12YHR121W HAP5Q02516 242 aa11.34□□□□□ -0.59
LSM12YHR121W YDR344CQ05510 147 aa11.34□□□□□ -0.59
LSM12YHR121W COX6P00427 148 aa11.32□□□□□ -0.6
LSM12YHR121W PBS2P08018 668 aa11.31□□□□□ -0.6
LSM12YHR121W NMA111P53920 997 aa11.3□□□□□ -0.6
LSM12YHR121W CDC73Q06697 393 aa11.29□□□□□ -0.6
LSM12YHR121W SPT23P35210 1082 aa11.28□□□□□ -0.6
LSM12YHR121W BNI4P53858 892 aa11.25□□□□□ -0.61
LSM12YHR121W ISU2Q12056 156 aa11.25□□□□□ -0.61
LSM12YHR121W SPB4P25808 606 aaPredicted RBP11.22□□□□□ -0.61
LSM12YHR121W BCK2P33306 851 aa11.22□□□□□ -0.61
LSM12YHR121W MAM3Q12296 706 aa11.2□□□□□ -0.62
LSM12YHR121W DSF2P38213 736 aa11.19□□□□□ -0.62
LSM12YHR121W PTC2P39966 464 aaKnown RBP11.19□□□□□ -0.62
LSM12YHR121W ORC6P38826 435 aa11.17□□□□□ -0.62
LSM12YHR121W PEX21P50091 288 aa11.17□□□□□ -0.62
LSM12YHR121W CSC1Q06538 782 aa11.17□□□□□ -0.62
LSM12YHR121W VRP1P37370 817 aa11.14□□□□□ -0.63
LSM12YHR121W TFB4Q12004 338 aa11.13□□□□□ -0.63
LSM12YHR121W GAP1P19145 602 aaPredicted RBP11.12□□□□□ -0.63
LSM12YHR121W YML082WQ04533 649 aaKnown RBP11.12□□□□□ -0.63
LSM12YHR121W IES2P40154 320 aa11.1□□□□□ -0.63
LSM12YHR121W YRR1Q12172 810 aa11.06□□□□□ -0.64
LSM12YHR121W TUM1Q08686 304 aaKnown RBP11.05□□□□□ -0.64
LSM12YHR121W PSE1P32337 1089 aaKnown RBP11.04□□□□□ -0.64
LSM12YHR121W MVP1P40959 511 aaKnown RBP11.04□□□□□ -0.64
LSM12YHR121W PDR1P12383 1068 aa11.03□□□□□ -0.64
LSM12YHR121W XDJ1P39102 459 aa11.02□□□□□ -0.65
LSM12YHR121W RAM1P22007 431 aa11.01□□□□□ -0.65
LSM12YHR121W RGR1P19263 1082 aa11□□□□□ -0.65
LSM12YHR121W NUP42P49686 430 aaKnown RBP10.99□□□□□ -0.65
LSM12YHR121W YPR015CQ12531 247 aa10.97□□□□□ -0.65
LSM12YHR121W YPR109WQ06104 294 aa10.96□□□□□ -0.65
LSM12YHR121W CLB5P30283 435 aa10.94□□□□□ -0.66
LSM12YHR121W NUD1P32336 851 aa10.93□□□□□ -0.66
LSM12YHR121W NPL4P33755 580 aa10.93□□□□□ -0.66
LSM12YHR121W DIT2P21595 489 aa10.92□□□□□ -0.66
LSM12YHR121W GYP1Q08484 637 aa10.9□□□□□ -0.66
LSM12YHR121W STR2P47164 639 aa10.86□□□□□ -0.67
LSM12YHR121W SAS4Q04003 481 aa10.86□□□□□ -0.67
LSM12YHR121W TEA1P47988 759 aa10.85□□□□□ -0.67
LSM12YHR121W ISM1P48526 1002 aa10.85□□□□□ -0.67
LSM12YHR121W YNR021WP53723 404 aaKnown RBP10.84□□□□□ -0.67
LSM12YHR121W BUD20Q08004 166 aaPredicted RBP10.84□□□□□ -0.67
LSM12YHR121W PRT1P06103 763 aaKnown RBP10.82□□□□□ -0.68
LSM12YHR121W LEU3P08638 886 aa10.81□□□□□ -0.68
LSM12YHR121W ATF2P53296 535 aa10.8□□□□□ -0.68
LSM12YHR121W GCD11P32481 527 aaKnown RBP10.78□□□□□ -0.68
LSM12YHR121W DPS1P04802 557 aaKnown RBP10.77□□□□□ -0.69
LSM12YHR121W GLC3P32775 704 aa10.76□□□□□ -0.69
LSM12YHR121W MRF1P30775 413 aaPredicted RBP10.74□□□□□ -0.69
LSM12YHR121W TY1A-DR4O74302 440 aa10.72□□□□□ -0.69
LSM12YHR121W TY1A-HP0C2I4 478 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 5,963 RNA–protein pairs in 50.4 ms