RNA–Protein interactions for RNA: YGR169C-A

LSO2, Transcript of Putative protein of unknown function, yeast

Gene LSO2, Length 279 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSO2	YGR169C-A	SOL3	P38858	249 aa		4.41	□□□□□ -1.7
LSO2	YGR169C-A	YGR273C	P53329	174 aa		4.41	□□□□□ -1.7
LSO2	YGR169C-A	COX6	P00427	148 aa		4.4	□□□□□ -1.71
LSO2	YGR169C-A	HTA1	P04911	132 aa	Known RBP	4.4	□□□□□ -1.71
LSO2	YGR169C-A	HTA2	P04912	132 aa		4.4	□□□□□ -1.71
LSO2	YGR169C-A	PBS2	P08018	668 aa		4.4	□□□□□ -1.71
LSO2	YGR169C-A	TIF11	P38912	153 aa	Known RBP	4.4	□□□□□ -1.71
LSO2	YGR169C-A	SET4	P42948	560 aa		4.4	□□□□□ -1.71
LSO2	YGR169C-A	NST1	P53935	1240 aa		4.4	□□□□□ -1.71
LSO2	YGR169C-A	DCW1	P36091	449 aa		4.39	□□□□□ -1.71
LSO2	YGR169C-A	WSC3	Q12215	556 aa		4.39	□□□□□ -1.71
LSO2	YGR169C-A	YBL029C-A	Q3E756	94 aa		4.39	□□□□□ -1.71
LSO2	YGR169C-A	PTC4	P38089	393 aa		4.38	□□□□□ -1.71
LSO2	YGR169C-A	ULI1	P43604	169 aa		4.38	□□□□□ -1.71
LSO2	YGR169C-A	SPP1	Q03012	353 aa		4.38	□□□□□ -1.71
LSO2	YGR169C-A	JIP4	Q03361	876 aa		4.38	□□□□□ -1.71
LSO2	YGR169C-A	IOC2	Q12072	812 aa		4.38	□□□□□ -1.71
LSO2	YGR169C-A	TRP5	P00931	707 aa	Known RBP	4.37	□□□□□ -1.71
LSO2	YGR169C-A	AI4	P03878	556 aa		4.37	□□□□□ -1.71
LSO2	YGR169C-A	MPH3	P0CE00	602 aa		4.37	□□□□□ -1.71
LSO2	YGR169C-A	RPN1	P38764	993 aa	Known RBP	4.36	□□□□□ -1.71
LSO2	YGR169C-A	YDR090C	Q03193	310 aa		4.36	□□□□□ -1.71
LSO2	YGR169C-A	YLR326W	Q06170	240 aa	Known RBP	4.36	□□□□□ -1.71
LSO2	YGR169C-A	YEL023C	P39992	682 aa		4.35	□□□□□ -1.71
LSO2	YGR169C-A	KEX1	P09620	729 aa		4.34	□□□□□ -1.71
LSO2	YGR169C-A	VHR2	P40041	505 aa		4.34	□□□□□ -1.71
LSO2	YGR169C-A	DAN4	P47179	1161 aa		4.34	□□□□□ -1.71
LSO2	YGR169C-A	YNL035C	P53962	389 aa	Known RBP	4.34	□□□□□ -1.71
LSO2	YGR169C-A	MAM3	Q12296	706 aa		4.34	□□□□□ -1.71
LSO2	YGR169C-A	RAD54	P32863	898 aa		4.32	□□□□□ -1.72
LSO2	YGR169C-A	SEC61	P32915	480 aa		4.32	□□□□□ -1.72
LSO2	YGR169C-A	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.32	□□□□□ -1.72	not detected
LSO2	YGR169C-A	NUP42	P49686	430 aa	Known RBP	4.32	□□□□□ -1.72
LSO2	YGR169C-A	YNR021W	P53723	404 aa	Known RBP	4.32	□□□□□ -1.72
LSO2	YGR169C-A	KIC1	P38692	1080 aa		4.31	□□□□□ -1.72
LSO2	YGR169C-A	ILV3	P39522	585 aa	Known RBP	4.3	□□□□□ -1.72
LSO2	YGR169C-A	DIT2	P21595	489 aa		4.29	□□□□□ -1.72
LSO2	YGR169C-A	LDB19	Q12502	818 aa		4.29	□□□□□ -1.72
LSO2	YGR169C-A	PSE1	P32337	1089 aa	Known RBP	4.28	□□□□□ -1.72
LSO2	YGR169C-A	RTG1	P32607	177 aa		4.28	□□□□□ -1.72
LSO2	YGR169C-A	IES2	P40154	320 aa		4.28	□□□□□ -1.72
LSO2	YGR169C-A	AIM7	Q12156	149 aa		4.28	□□□□□ -1.72
LSO2	YGR169C-A	NCR1	Q12200	1170 aa		4.28	□□□□□ -1.72
LSO2	YGR169C-A	RPP1B	P10622	106 aa	Known RBP	4.27	□□□□□ -1.73
LSO2	YGR169C-A	SLI15	P38283	698 aa		4.27	□□□□□ -1.73
LSO2	YGR169C-A	GAP1	P19145	602 aa	Predicted RBP	4.26	□□□□□ -1.73
LSO2	YGR169C-A	TFG1	P41895	735 aa	Predicted RBP	4.26	□□□□□ -1.73
LSO2	YGR169C-A	ORC6	P38826	435 aa		4.25	□□□□□ -1.73
LSO2	YGR169C-A	PML39	Q03760	334 aa		4.25	□□□□□ -1.73
LSO2	YGR169C-A	CSC1	Q06538	782 aa		4.25	□□□□□ -1.73
LSO2	YGR169C-A	RGR1	P19263	1082 aa		4.24	□□□□□ -1.73
LSO2	YGR169C-A	FKH1	P40466	484 aa		4.24	□□□□□ -1.73
LSO2	YGR169C-A	YDL129W	Q07555	291 aa		4.24	□□□□□ -1.73
LSO2	YGR169C-A	ATF2	P53296	535 aa		4.23	□□□□□ -1.73
LSO2	YGR169C-A	DPL1	Q05567	589 aa		4.23	□□□□□ -1.73
LSO2	YGR169C-A	TFB4	Q12004	338 aa		4.23	□□□□□ -1.73
LSO2	YGR169C-A	AIR2	Q12476	344 aa	Known RBP	4.23	□□□□□ -1.73
LSO2	YGR169C-A	KIN1	P13185	1064 aa		4.22	□□□□□ -1.73
LSO2	YGR169C-A	MVP1	P40959	511 aa	Known RBP	4.22	□□□□□ -1.73
LSO2	YGR169C-A	MID1	P41821	548 aa		4.22	□□□□□ -1.73
LSO2	YGR169C-A	CLB5	P30283	435 aa		4.21	□□□□□ -1.74
LSO2	YGR169C-A	GLC3	P32775	704 aa		4.21	□□□□□ -1.74
LSO2	YGR169C-A	CDC73	Q06697	393 aa		4.21	□□□□□ -1.74
LSO2	YGR169C-A	ISU2	Q12056	156 aa		4.21	□□□□□ -1.74
LSO2	YGR169C-A	MPC54	Q08550	464 aa		4.2	□□□□□ -1.74
LSO2	YGR169C-A	ARH1	P48360	493 aa		4.19	□□□□□ -1.74
LSO2	YGR169C-A	NMA111	P53920	997 aa		4.19	□□□□□ -1.74
LSO2	YGR169C-A	TEA1	P47988	759 aa		4.18	□□□□□ -1.74
LSO2	YGR169C-A	PEX29	Q03370	554 aa		4.18	□□□□□ -1.74
LSO2	YGR169C-A	YPR109W	Q06104	294 aa		4.18	□□□□□ -1.74
LSO2	YGR169C-A	PEX21	P50091	288 aa		4.17	□□□□□ -1.74
LSO2	YGR169C-A	SAP30	P38429	201 aa		4.16	□□□□□ -1.74
LSO2	YGR169C-A	BMT6	Q12291	365 aa		4.16	□□□□□ -1.74
LSO2	YGR169C-A	SIT4	P20604	311 aa		4.15	□□□□□ -1.75
LSO2	YGR169C-A	YJL171C	P46992	396 aa		4.15	□□□□□ -1.75
LSO2	YGR169C-A	HPC2	Q01448	625 aa		4.15	□□□□□ -1.75
LSO2	YGR169C-A	HAP5	Q02516	242 aa		4.15	□□□□□ -1.75
LSO2	YGR169C-A	TUM1	Q08686	304 aa	Known RBP	4.15	□□□□□ -1.75
LSO2	YGR169C-A	SPT23	P35210	1082 aa		4.14	□□□□□ -1.75
LSO2	YGR169C-A	BNI4	P53858	892 aa		4.14	□□□□□ -1.75
LSO2	YGR169C-A	PRE3	P38624	215 aa		4.13	□□□□□ -1.75
LSO2	YGR169C-A	GUA1	P38625	525 aa	Known RBP	4.13	□□□□□ -1.75
LSO2	YGR169C-A	YRR1	Q12172	810 aa		4.13	□□□□□ -1.75
LSO2	YGR169C-A	CHL1	P22516	861 aa	Predicted RBP	4.12	□□□□□ -1.75
LSO2	YGR169C-A	CSN12	P47130	423 aa		4.12	□□□□□ -1.75
LSO2	YGR169C-A	HGH1	P48362	394 aa	Known RBP	4.12	□□□□□ -1.75
LSO2	YGR169C-A	HST2	P53686	357 aa		4.12	□□□□□ -1.75
LSO2	YGR169C-A	ELP4	Q02884	456 aa	Known RBP	4.12	□□□□□ -1.75
LSO2	YGR169C-A	YML082W	Q04533	649 aa	Known RBP	4.12	□□□□□ -1.75
LSO2	YGR169C-A	SSA2	P10592	639 aa	Known RBP	4.11	□□□□□ -1.75
LSO2	YGR169C-A	RTF1	P53064	558 aa		4.11	□□□□□ -1.75
LSO2	YGR169C-A	FPK1	P53739	893 aa		4.11	□□□□□ -1.75
LSO2	YGR169C-A	NIS1	P53939	407 aa		4.11	□□□□□ -1.75
LSO2	YGR169C-A	TAF7	Q05021	590 aa		4.11	□□□□□ -1.75
LSO2	YGR169C-A	DMA2	P53924	522 aa		4.1	□□□□□ -1.75
LSO2	YGR169C-A	YNL115C	P53925	644 aa		4.1	□□□□□ -1.75
LSO2	YGR169C-A	RAM1	P22007	431 aa		4.09	□□□□□ -1.75
LSO2	YGR169C-A	GLN1	P32288	370 aa	Known RBP	4.09	□□□□□ -1.75
LSO2	YGR169C-A	PDR1	P12383	1068 aa		4.08	□□□□□ -1.76
LSO2	YGR169C-A	NUD1	P32336	851 aa		4.08	□□□□□ -1.76

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