RNA–Protein interactions for RNA: YGR119C

NUP57, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP57, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP57YGR119C ATG2P53855 1592 aa10.85□□□□□ -0.67
NUP57YGR119C SSK2P53599 1579 aa10.84□□□□□ -0.67
NUP57YGR119C NOP53Q12080 455 aaKnown RBP10.84□□□□□ -0.67
NUP57YGR119C PTC3P34221 468 aaKnown RBP10.78□□□□□ -0.68
NUP57YGR119C CHD1P32657 1468 aa10.77□□□□□ -0.69
NUP57YGR119C VMA1P17255 1071 aaKnown RBP10.76□□□□□ -0.69
NUP57YGR119C TAF7Q05021 590 aa10.75□□□□□ -0.69
NUP57YGR119C PBS2P08018 668 aa10.74□□□□□ -0.69
NUP57YGR119C BPT1P14772 1559 aa10.73□□□□□ -0.69
NUP57YGR119C MMS22Q06164 1454 aa10.73□□□□□ -0.69
NUP57YGR119C TAF2P23255 1407 aa10.72□□□□□ -0.69
NUP57YGR119C DSF2P38213 736 aa10.72□□□□□ -0.69
NUP57YGR119C MYO2P19524 1574 aaKnown RBP10.72□□□□□ -0.69
NUP57YGR119C ESP1Q03018 1630 aa10.71□□□□□ -0.69
NUP57YGR119C RPN1P38764 993 aaKnown RBP10.71□□□□□ -0.69
NUP57YGR119C REF2P42073 533 aaPredicted RBP10.68□□□□□ -0.7
NUP57YGR119C MST1P07236 462 aa10.66□□□□□ -0.7
NUP57YGR119C ATH1P48016 1211 aa10.63□□□□□ -0.71
NUP57YGR119C GRE2Q12068 342 aaKnown RBP10.63□□□□□ -0.71
NUP57YGR119C GTT3P39996 337 aa10.62□□□□□ -0.71
NUP57YGR119C SAM3Q08986 587 aa10.61□□□□□ -0.71
NUP57YGR119C MAM3Q12296 706 aa10.61□□□□□ -0.71
NUP57YGR119C POL1P13382 1468 aa10.61□□□□□ -0.71
NUP57YGR119C STU1P38198 1513 aa10.58□□□□□ -0.72
NUP57YGR119C GUT1P32190 709 aa10.58□□□□□ -0.72
NUP57YGR119C IES2P40154 320 aa10.57□□□□□ -0.72
NUP57YGR119C GYP5Q12344 894 aa10.55□□□□□ -0.72
NUP57YGR119C YCF1P39109 1515 aaKnown RBP10.55□□□□□ -0.72
NUP57YGR119C YPK9Q12697 1472 aa10.55□□□□□ -0.72
NUP57YGR119C VHR2P40041 505 aa10.55□□□□□ -0.72
NUP57YGR119C MAK21Q12176 1025 aaKnown RBP10.54□□□□□ -0.72
NUP57YGR119C COX6P00427 148 aa10.51□□□□□ -0.73
NUP57YGR119C YNR021WP53723 404 aaKnown RBP10.51□□□□□ -0.73
NUP57YGR119C YOL036WQ08206 761 aa10.51□□□□□ -0.73
NUP57YGR119C YTA7P40340 1379 aa10.5□□□□□ -0.73
NUP57YGR119C UBP14P38237 781 aaKnown RBP10.49□□□□□ -0.73
NUP57YGR119C NUP42P49686 430 aaKnown RBP10.49□□□□□ -0.73
NUP57YGR119C SET4P42948 560 aa10.48□□□□□ -0.73
NUP57YGR119C YGR273CP53329 174 aa10.48□□□□□ -0.73
NUP57YGR119C GLC3P32775 704 aa10.47□□□□□ -0.73
NUP57YGR119C YDR090CQ03193 310 aa10.47□□□□□ -0.73
NUP57YGR119C YLR326WQ06170 240 aaKnown RBP10.47□□□□□ -0.73
NUP57YGR119C DIT2P21595 489 aa10.47□□□□□ -0.73
NUP57YGR119C DCW1P36091 449 aa10.46□□□□□ -0.74
NUP57YGR119C SOL3P38858 249 aa10.46□□□□□ -0.74
NUP57YGR119C UFD4P33202 1483 aa10.46□□□□□ -0.74
NUP57YGR119C RKR1Q04781 1562 aa10.43□□□□□ -0.74
NUP57YGR119C ABP1P15891 592 aaKnown RBP10.43□□□□□ -0.74
NUP57YGR119C YOR1P53049 1477 aa10.42□□□□□ -0.74
NUP57YGR119C DMA2P53924 522 aa10.42□□□□□ -0.74
NUP57YGR119C SCC2Q04002 1493 aa10.42□□□□□ -0.74
NUP57YGR119C KIN1P13185 1064 aa10.41□□□□□ -0.74
NUP57YGR119C WSC3Q12215 556 aa10.41□□□□□ -0.74
NUP57YGR119C KEX1P09620 729 aa10.4□□□□□ -0.74
NUP57YGR119C MYO4P32492 1471 aa10.4□□□□□ -0.74
NUP57YGR119C KIC1P38692 1080 aa10.4□□□□□ -0.75
NUP57YGR119C MSB4Q12317 492 aa10.4□□□□□ -0.75
NUP57YGR119C HTA1P04911 132 aaKnown RBP10.39□□□□□ -0.75
NUP57YGR119C HTA2P04912 132 aa10.39□□□□□ -0.75
NUP57YGR119C AIM7Q12156 149 aa10.39□□□□□ -0.75
NUP57YGR119C NST1P53935 1240 aa10.38□□□□□ -0.75
NUP57YGR119C RAD54P32863 898 aa10.37□□□□□ -0.75
NUP57YGR119C PCS60P38137 543 aaKnown RBP RIP-Chip data10.36□□□□□ -0.75not detected
NUP57YGR119C RPO31P04051 1460 aa10.36□□□□□ -0.75
NUP57YGR119C TRM732Q03496 1420 aa10.34□□□□□ -0.75
NUP57YGR119C TY2B-LR1P0C2J3 1770 aa10.34□□□□□ -0.75
NUP57YGR119C TY2B-FP0CX63 1770 aa10.34□□□□□ -0.75
NUP57YGR119C TY2B-GR2P0CX64 1770 aa10.34□□□□□ -0.75
NUP57YGR119C TY2B-CP25384 1770 aa10.34□□□□□ -0.75
NUP57YGR119C TY2B-DR2Q03494 1770 aa10.34□□□□□ -0.75
NUP57YGR119C TY1B-DR1Q03855 1755 aa10.34□□□□□ -0.75
NUP57YGR119C TY2B-DR3Q07791 1770 aaKnown RBP10.34□□□□□ -0.75
NUP57YGR119C TY2B-OR1Q12113 1770 aa10.34□□□□□ -0.75
NUP57YGR119C TY2B-DR1Q12472 1770 aa10.34□□□□□ -0.75
NUP57YGR119C TY2B-OR2Q12501 1770 aa10.34□□□□□ -0.75
NUP57YGR119C YBL029C-AQ3E756 94 aa10.33□□□□□ -0.76
NUP57YGR119C CDC25P04821 1589 aa10.33□□□□□ -0.76
NUP57YGR119C SMC4Q12267 1418 aa10.33□□□□□ -0.76
NUP57YGR119C ESC1Q03661 1658 aaKnown RBP10.33□□□□□ -0.76
NUP57YGR119C TOP2P06786 1428 aaKnown RBP10.32□□□□□ -0.76
NUP57YGR119C ILV3P39522 585 aaKnown RBP10.31□□□□□ -0.76
NUP57YGR119C ATF2P53296 535 aa10.31□□□□□ -0.76
NUP57YGR119C YEL023CP39992 682 aa10.29□□□□□ -0.76
NUP57YGR119C TY1B-BRQ12193 1756 aa10.29□□□□□ -0.76
NUP57YGR119C TY1B-GR3Q12316 1755 aa10.29□□□□□ -0.76
NUP57YGR119C TY1B-ORQ92393 1755 aa10.29□□□□□ -0.76
NUP57YGR119C AI4P03878 556 aa10.29□□□□□ -0.76
NUP57YGR119C MPH3P0CE00 602 aa10.29□□□□□ -0.76
NUP57YGR119C EAP1P36041 632 aaKnown RBP10.26□□□□□ -0.77
NUP57YGR119C VNX1P42839 908 aa10.25□□□□□ -0.77
NUP57YGR119C SNQ2P32568 1501 aaKnown RBP10.25□□□□□ -0.77
NUP57YGR119C TRP5P00931 707 aaKnown RBP10.25□□□□□ -0.77
NUP57YGR119C IKI3Q06706 1349 aaKnown RBP10.25□□□□□ -0.77
NUP57YGR119C MET5P47169 1442 aa10.24□□□□□ -0.77
NUP57YGR119C DNF1P32660 1571 aa10.24□□□□□ -0.77
NUP57YGR119C PSE1P32337 1089 aaKnown RBP10.23□□□□□ -0.77
NUP57YGR119C ORC6P38826 435 aa10.23□□□□□ -0.77
NUP57YGR119C DAN4P47179 1161 aa10.21□□□□□ -0.78
NUP57YGR119C PAN1P32521 1480 aa10.21□□□□□ -0.78
NUP57YGR119C TY2B-BQ12491 1770 aa10.21□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms