RNA–Protein interactions for RNA: YGR109W-A

YGR109W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YGR109W-A, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-AYGR109W-A ATH1P48016 1211 aa8.13□□□□□ -1.11
YGR109W-AYGR109W-A NOP53Q12080 455 aaKnown RBP8.12□□□□□ -1.11
YGR109W-AYGR109W-A GUT1P32190 709 aa8.11□□□□□ -1.11
YGR109W-AYGR109W-A SET1P38827 1080 aaKnown RBP8.11□□□□□ -1.11
YGR109W-AYGR109W-A YNL035CP53962 389 aaKnown RBP8.11□□□□□ -1.11
YGR109W-AYGR109W-A JIP4Q03361 876 aa8.08□□□□□ -1.12
YGR109W-AYGR109W-A YEL023CP39992 682 aa8.07□□□□□ -1.12
YGR109W-AYGR109W-A DAN4P47179 1161 aa8.07□□□□□ -1.12
YGR109W-AYGR109W-A SEC61P32915 480 aa8.06□□□□□ -1.12
YGR109W-AYGR109W-A NCR1Q12200 1170 aa8.06□□□□□ -1.12
YGR109W-AYGR109W-A PTC4P38089 393 aa8.05□□□□□ -1.12
YGR109W-AYGR109W-A SOL3P38858 249 aa8.03□□□□□ -1.12
YGR109W-AYGR109W-A NST1P53935 1240 aa8.02□□□□□ -1.13
YGR109W-AYGR109W-A DMA1P38823 416 aa8.01□□□□□ -1.13
YGR109W-AYGR109W-A BCK2P33306 851 aa7.99□□□□□ -1.13
YGR109W-AYGR109W-A TFG1P41895 735 aaPredicted RBP7.99□□□□□ -1.13
YGR109W-AYGR109W-A YGR273CP53329 174 aa7.97□□□□□ -1.13
YGR109W-AYGR109W-A MPH3P0CE00 602 aa7.94□□□□□ -1.14
YGR109W-AYGR109W-A AI4P03878 556 aa7.93□□□□□ -1.14
YGR109W-AYGR109W-A IFH1P39520 1085 aa7.93□□□□□ -1.14
YGR109W-AYGR109W-A YDL129WQ07555 291 aa7.93□□□□□ -1.14
YGR109W-AYGR109W-A SAP30P38429 201 aa7.91□□□□□ -1.14
YGR109W-AYGR109W-A ILV3P39522 585 aaKnown RBP7.91□□□□□ -1.14
YGR109W-AYGR109W-A PML39Q03760 334 aa7.91□□□□□ -1.14
YGR109W-AYGR109W-A YPR148CQ06523 435 aa7.9□□□□□ -1.14
YGR109W-AYGR109W-A RGA1P39083 1007 aa7.86□□□□□ -1.15
YGR109W-AYGR109W-A MID1P41821 548 aa7.86□□□□□ -1.15
YGR109W-AYGR109W-A VPS70P47161 811 aa7.85□□□□□ -1.15
YGR109W-AYGR109W-A KEX1P09620 729 aa7.84□□□□□ -1.15
YGR109W-AYGR109W-A UBP14P38237 781 aaKnown RBP7.84□□□□□ -1.15
YGR109W-AYGR109W-A VHR2P40041 505 aa7.84□□□□□ -1.15
YGR109W-AYGR109W-A YLR326WQ06170 240 aaKnown RBP7.83□□□□□ -1.16
YGR109W-AYGR109W-A SLI15P38283 698 aa7.79□□□□□ -1.16
YGR109W-AYGR109W-A YDR344CQ05510 147 aa7.79□□□□□ -1.16
YGR109W-AYGR109W-A REF2P42073 533 aaPredicted RBP7.78□□□□□ -1.16
YGR109W-AYGR109W-A RQC2Q12532 1038 aaKnown RBP7.78□□□□□ -1.16
YGR109W-AYGR109W-A SAS10Q12136 610 aaPredicted RBP7.77□□□□□ -1.17
YGR109W-AYGR109W-A PCS60P38137 543 aaKnown RBP RIP-Chip data7.76□□□□□ -1.17not detected
YGR109W-AYGR109W-A PRE3P38624 215 aa7.76□□□□□ -1.17
YGR109W-AYGR109W-A PEX29Q03370 554 aa7.76□□□□□ -1.17
YGR109W-AYGR109W-A CHL1P22516 861 aaPredicted RBP7.75□□□□□ -1.17
YGR109W-AYGR109W-A YDR090CQ03193 310 aa7.75□□□□□ -1.17
YGR109W-AYGR109W-A RAD54P32863 898 aa7.74□□□□□ -1.17
YGR109W-AYGR109W-A ARH1P48360 493 aa7.73□□□□□ -1.17
YGR109W-AYGR109W-A ELP4Q02884 456 aaKnown RBP7.73□□□□□ -1.17
YGR109W-AYGR109W-A MPC54Q08550 464 aa7.73□□□□□ -1.17
YGR109W-AYGR109W-A CKB1P43639 278 aa7.71□□□□□ -1.18
YGR109W-AYGR109W-A DPL1Q05567 589 aa7.7□□□□□ -1.18
YGR109W-AYGR109W-A KIC1P38692 1080 aa7.69□□□□□ -1.18
YGR109W-AYGR109W-A CDC73Q06697 393 aa7.69□□□□□ -1.18
YGR109W-AYGR109W-A NMA111P53920 997 aa7.68□□□□□ -1.18
YGR109W-AYGR109W-A HAP5Q02516 242 aa7.68□□□□□ -1.18
YGR109W-AYGR109W-A COX6P00427 148 aa7.66□□□□□ -1.18
YGR109W-AYGR109W-A MAK21Q12176 1025 aaKnown RBP7.66□□□□□ -1.18
YGR109W-AYGR109W-A PBS2P08018 668 aa7.65□□□□□ -1.18
YGR109W-AYGR109W-A SPT23P35210 1082 aa7.64□□□□□ -1.19
YGR109W-AYGR109W-A XDJ1P39102 459 aa7.64□□□□□ -1.19
YGR109W-AYGR109W-A DPS1P04802 557 aaKnown RBP7.62□□□□□ -1.19
YGR109W-AYGR109W-A ISU2Q12056 156 aa7.62□□□□□ -1.19
YGR109W-AYGR109W-A RPP1BP10622 106 aaKnown RBP7.61□□□□□ -1.19
YGR109W-AYGR109W-A BNI4P53858 892 aa7.61□□□□□ -1.19
YGR109W-AYGR109W-A VRP1P37370 817 aa7.59□□□□□ -1.19
YGR109W-AYGR109W-A PTC2P39966 464 aaKnown RBP7.58□□□□□ -1.2
YGR109W-AYGR109W-A GAP1P19145 602 aaPredicted RBP7.57□□□□□ -1.2
YGR109W-AYGR109W-A ORC6P38826 435 aa7.57□□□□□ -1.2
YGR109W-AYGR109W-A SPB4P25808 606 aaPredicted RBP7.56□□□□□ -1.2
YGR109W-AYGR109W-A DSF2P38213 736 aa7.56□□□□□ -1.2
YGR109W-AYGR109W-A YML082WQ04533 649 aaKnown RBP7.55□□□□□ -1.2
YGR109W-AYGR109W-A CSC1Q06538 782 aa7.54□□□□□ -1.2
YGR109W-AYGR109W-A MAM3Q12296 706 aa7.54□□□□□ -1.2
YGR109W-AYGR109W-A PDR1P12383 1068 aa7.52□□□□□ -1.21
YGR109W-AYGR109W-A PEX21P50091 288 aa7.52□□□□□ -1.21
YGR109W-AYGR109W-A RAM1P22007 431 aa7.51□□□□□ -1.21
YGR109W-AYGR109W-A TFB4Q12004 338 aa7.51□□□□□ -1.21
YGR109W-AYGR109W-A IES2P40154 320 aa7.5□□□□□ -1.21
YGR109W-AYGR109W-A YRR1Q12172 810 aa7.5□□□□□ -1.21
YGR109W-AYGR109W-A YPR015CQ12531 247 aa7.5□□□□□ -1.21
YGR109W-AYGR109W-A MVP1P40959 511 aaKnown RBP7.49□□□□□ -1.21
YGR109W-AYGR109W-A SRC1Q03707 834 aa7.49□□□□□ -1.21
YGR109W-AYGR109W-A RGR1P19263 1082 aa7.48□□□□□ -1.21
YGR109W-AYGR109W-A TUM1Q08686 304 aaKnown RBP7.48□□□□□ -1.21
YGR109W-AYGR109W-A NUP42P49686 430 aaKnown RBP7.46□□□□□ -1.22
YGR109W-AYGR109W-A PSE1P32337 1089 aaKnown RBP7.45□□□□□ -1.22
YGR109W-AYGR109W-A YPR109WQ06104 294 aa7.44□□□□□ -1.22
YGR109W-AYGR109W-A DIT2P21595 489 aa7.42□□□□□ -1.22
YGR109W-AYGR109W-A NUD1P32336 851 aa7.4□□□□□ -1.22
YGR109W-AYGR109W-A STR2P47164 639 aa7.39□□□□□ -1.23
YGR109W-AYGR109W-A ISM1P48526 1002 aa7.38□□□□□ -1.23
YGR109W-AYGR109W-A BUD20Q08004 166 aaPredicted RBP7.38□□□□□ -1.23
YGR109W-AYGR109W-A GYP1Q08484 637 aa7.37□□□□□ -1.23
YGR109W-AYGR109W-A NPL4P33755 580 aa7.36□□□□□ -1.23
YGR109W-AYGR109W-A CLB5P30283 435 aa7.34□□□□□ -1.23
YGR109W-AYGR109W-A PRT1P06103 763 aaKnown RBP7.33□□□□□ -1.24
YGR109W-AYGR109W-A SAS4Q04003 481 aa7.33□□□□□ -1.24
YGR109W-AYGR109W-A GCD11P32481 527 aaKnown RBP7.31□□□□□ -1.24
YGR109W-AYGR109W-A TEA1P47988 759 aa7.31□□□□□ -1.24
YGR109W-AYGR109W-A TY1A-DR4O74302 440 aa7.3□□□□□ -1.24
YGR109W-AYGR109W-A TY1A-HP0C2I4 478 aaKnown RBP7.3□□□□□ -1.24
YGR109W-AYGR109W-A TY1A-AP0CX57 440 aa7.3□□□□□ -1.24
YGR109W-AYGR109W-A TY1A-PR1P0CX58 440 aa7.3□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms