RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W RTG1P32607 177 aa7.6□□□□□ -1.19
VMA21YGR105W FKH1P40466 484 aa7.6□□□□□ -1.19
VMA21YGR105W YEL023CP39992 682 aa7.59□□□□□ -1.19
VMA21YGR105W YNL035CP53962 389 aaKnown RBP7.59□□□□□ -1.19
VMA21YGR105W SOL3P38858 249 aa7.58□□□□□ -1.2
VMA21YGR105W AIR2Q12476 344 aaKnown RBP7.58□□□□□ -1.2
VMA21YGR105W DAN4P47179 1161 aa7.56□□□□□ -1.2
VMA21YGR105W JIP4Q03361 876 aa7.56□□□□□ -1.2
VMA21YGR105W PTC4P38089 393 aa7.55□□□□□ -1.2
VMA21YGR105W NST1P53935 1240 aa7.55□□□□□ -1.2
VMA21YGR105W SEC61P32915 480 aa7.53□□□□□ -1.2
VMA21YGR105W IFH1P39520 1085 aa7.53□□□□□ -1.2
VMA21YGR105W YGR273CP53329 174 aa7.53□□□□□ -1.2
VMA21YGR105W YPR148CQ06523 435 aa7.53□□□□□ -1.2
VMA21YGR105W NCR1Q12200 1170 aa7.53□□□□□ -1.2
VMA21YGR105W VPS70P47161 811 aa7.52□□□□□ -1.21
VMA21YGR105W MPH3P0CE00 602 aa7.48□□□□□ -1.21
VMA21YGR105W ILV3P39522 585 aaKnown RBP7.48□□□□□ -1.21
VMA21YGR105W YJL171CP46992 396 aa7.48□□□□□ -1.21
VMA21YGR105W TFG1P41895 735 aaPredicted RBP7.47□□□□□ -1.21
VMA21YGR105W SAS10Q12136 610 aaPredicted RBP7.47□□□□□ -1.21
VMA21YGR105W AI4P03878 556 aa7.46□□□□□ -1.22
VMA21YGR105W VHR2P40041 505 aa7.45□□□□□ -1.22
VMA21YGR105W PML39Q03760 334 aa7.44□□□□□ -1.22
VMA21YGR105W BMT6Q12291 365 aa7.44□□□□□ -1.22
VMA21YGR105W UBP14P38237 781 aaKnown RBP7.43□□□□□ -1.22
VMA21YGR105W KEX1P09620 729 aa7.42□□□□□ -1.22
VMA21YGR105W YLR326WQ06170 240 aaKnown RBP7.42□□□□□ -1.22
VMA21YGR105W YDL129WQ07555 291 aa7.42□□□□□ -1.22
VMA21YGR105W SAP30P38429 201 aa7.41□□□□□ -1.22
VMA21YGR105W MID1P41821 548 aa7.41□□□□□ -1.22
VMA21YGR105W REF2P42073 533 aaPredicted RBP7.4□□□□□ -1.22
VMA21YGR105W CKB1P43639 278 aa7.37□□□□□ -1.23
VMA21YGR105W PCS60P38137 543 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23not detected
VMA21YGR105W SLI15P38283 698 aa7.36□□□□□ -1.23
VMA21YGR105W YDR090CQ03193 310 aa7.36□□□□□ -1.23
VMA21YGR105W RAD54P32863 898 aa7.34□□□□□ -1.23
VMA21YGR105W YDR344CQ05510 147 aa7.33□□□□□ -1.24
VMA21YGR105W PBS2P08018 668 aa7.32□□□□□ -1.24
VMA21YGR105W PEX29Q03370 554 aa7.32□□□□□ -1.24
VMA21YGR105W KIC1P38692 1080 aa7.31□□□□□ -1.24
VMA21YGR105W COX6P00427 148 aa7.29□□□□□ -1.24
VMA21YGR105W MPC54Q08550 464 aa7.29□□□□□ -1.24
VMA21YGR105W CDC73Q06697 393 aa7.28□□□□□ -1.24
VMA21YGR105W SPB4P25808 606 aaPredicted RBP7.27□□□□□ -1.25
VMA21YGR105W MAK21Q12176 1025 aaKnown RBP7.27□□□□□ -1.25
VMA21YGR105W DPL1Q05567 589 aa7.26□□□□□ -1.25
VMA21YGR105W PRE3P38624 215 aa7.25□□□□□ -1.25
VMA21YGR105W ARH1P48360 493 aa7.25□□□□□ -1.25
VMA21YGR105W ELP4Q02884 456 aaKnown RBP7.25□□□□□ -1.25
VMA21YGR105W DSF2P38213 736 aa7.23□□□□□ -1.25
VMA21YGR105W NMA111P53920 997 aa7.23□□□□□ -1.25
VMA21YGR105W CHL1P22516 861 aaPredicted RBP7.22□□□□□ -1.25
VMA21YGR105W HAP5Q02516 242 aa7.21□□□□□ -1.26
VMA21YGR105W MAM3Q12296 706 aa7.21□□□□□ -1.26
VMA21YGR105W RPP1BP10622 106 aaKnown RBP7.18□□□□□ -1.26
VMA21YGR105W ORC6P38826 435 aa7.18□□□□□ -1.26
VMA21YGR105W IES2P40154 320 aa7.18□□□□□ -1.26
VMA21YGR105W ISU2Q12056 156 aa7.18□□□□□ -1.26
VMA21YGR105W SPT23P35210 1082 aa7.17□□□□□ -1.26
VMA21YGR105W GAP1P19145 602 aaPredicted RBP7.15□□□□□ -1.26
VMA21YGR105W BNI4P53858 892 aa7.14□□□□□ -1.27
VMA21YGR105W NUP42P49686 430 aaKnown RBP7.13□□□□□ -1.27
VMA21YGR105W PEX21P50091 288 aa7.13□□□□□ -1.27
VMA21YGR105W CSC1Q06538 782 aa7.13□□□□□ -1.27
VMA21YGR105W DIT2P21595 489 aa7.12□□□□□ -1.27
VMA21YGR105W PDR1P12383 1068 aa7.11□□□□□ -1.27
VMA21YGR105W PTC2P39966 464 aaKnown RBP7.11□□□□□ -1.27
VMA21YGR105W MVP1P40959 511 aaKnown RBP7.11□□□□□ -1.27
VMA21YGR105W RGR1P19263 1082 aa7.1□□□□□ -1.27
VMA21YGR105W TFB4Q12004 338 aa7.1□□□□□ -1.27
VMA21YGR105W YRR1Q12172 810 aa7.1□□□□□ -1.27
VMA21YGR105W TUM1Q08686 304 aaKnown RBP7.09□□□□□ -1.27
VMA21YGR105W PSE1P32337 1089 aaKnown RBP7.08□□□□□ -1.28
VMA21YGR105W BCK2P33306 851 aa7.08□□□□□ -1.28
VMA21YGR105W VRP1P37370 817 aa7.08□□□□□ -1.28
VMA21YGR105W RAM1P22007 431 aa7.07□□□□□ -1.28
VMA21YGR105W YML082WQ04533 649 aaKnown RBP7.07□□□□□ -1.28
VMA21YGR105W YPR109WQ06104 294 aa7.07□□□□□ -1.28
VMA21YGR105W YPR015CQ12531 247 aa7.06□□□□□ -1.28
VMA21YGR105W LEU3P08638 886 aa7.01□□□□□ -1.29
VMA21YGR105W NUD1P32336 851 aa7□□□□□ -1.29
VMA21YGR105W YNR021WP53723 404 aaKnown RBP7□□□□□ -1.29
VMA21YGR105W GLC3P32775 704 aa6.99□□□□□ -1.29
VMA21YGR105W STR2P47164 639 aa6.98□□□□□ -1.29
VMA21YGR105W ISM1P48526 1002 aa6.98□□□□□ -1.29
VMA21YGR105W TEA1P47988 759 aa6.97□□□□□ -1.29
VMA21YGR105W BUD20Q08004 166 aaPredicted RBP6.97□□□□□ -1.29
VMA21YGR105W CLB5P30283 435 aa6.96□□□□□ -1.3
VMA21YGR105W XDJ1P39102 459 aa6.96□□□□□ -1.3
VMA21YGR105W ATF2P53296 535 aa6.96□□□□□ -1.3
VMA21YGR105W NPL4P33755 580 aa6.95□□□□□ -1.3
VMA21YGR105W GYP1Q08484 637 aa6.93□□□□□ -1.3
VMA21YGR105W KEX2P13134 814 aa6.92□□□□□ -1.3
VMA21YGR105W GCD11P32481 527 aaKnown RBP6.92□□□□□ -1.3
VMA21YGR105W PRT1P06103 763 aaKnown RBP6.91□□□□□ -1.3
VMA21YGR105W NIS1P53939 407 aa6.91□□□□□ -1.3
VMA21YGR105W ERF2Q06551 359 aa6.91□□□□□ -1.3
VMA21YGR105W TY1A-DR4O74302 440 aa6.9□□□□□ -1.3
VMA21YGR105W TY1A-HP0C2I4 478 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms