RNA–Protein interactions for RNA: YGR100W

MDR1, Transcript of Cytoplasmic GTPase-activating protein, yeastyeast

Gene MDR1, Length 2,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDR1YGR100W NOP58Q12499 511 aaKnown RBP5.6□□□□□ -1.51
MDR1YGR100W MMS1Q06211 1407 aa5.59□□□□□ -1.51
MDR1YGR100W ECM16Q04217 1267 aaKnown RBP5.58□□□□□ -1.52
MDR1YGR100W YLR419WQ06698 1435 aaKnown RBP5.58□□□□□ -1.52
MDR1YGR100W SIC1P38634 284 aa5.58□□□□□ -1.52
MDR1YGR100W RPN1P38764 993 aaKnown RBP5.57□□□□□ -1.52
MDR1YGR100W VPS4P52917 437 aa5.56□□□□□ -1.52
MDR1YGR100W SCC2Q04002 1493 aa5.55□□□□□ -1.52
MDR1YGR100W RIX1P38883 763 aaPredicted RBP5.55□□□□□ -1.52
MDR1YGR100W ORC1P54784 914 aaPredicted RBP5.55□□□□□ -1.52
MDR1YGR100W HSP82P02829 709 aaKnown RBP5.55□□□□□ -1.52
MDR1YGR100W STU1P38198 1513 aa5.55□□□□□ -1.52
MDR1YGR100W BPT1P14772 1559 aa5.55□□□□□ -1.52
MDR1YGR100W NUP170P38181 1502 aa5.54□□□□□ -1.52
MDR1YGR100W TIF4632P39936 914 aaKnown RBP5.54□□□□□ -1.52
MDR1YGR100W PAP2P53632 584 aaKnown RBP5.54□□□□□ -1.52
MDR1YGR100W DSN1P40568 576 aa5.53□□□□□ -1.52
MDR1YGR100W SMC3P47037 1230 aa5.53□□□□□ -1.52
MDR1YGR100W NNF2P53253 936 aa5.53□□□□□ -1.52
MDR1YGR100W PCT1P13259 424 aa5.53□□□□□ -1.52
MDR1YGR100W PIL1P53252 339 aaKnown RBP5.53□□□□□ -1.52
MDR1YGR100W PAN1P32521 1480 aa5.53□□□□□ -1.52
MDR1YGR100W TAF2P23255 1407 aa5.53□□□□□ -1.52
MDR1YGR100W KNS1P32350 737 aaPredicted RBP5.53□□□□□ -1.52
MDR1YGR100W MSH4P40965 878 aaPredicted RBP5.53□□□□□ -1.52
MDR1YGR100W BMS1Q08965 1183 aaKnown RBP5.53□□□□□ -1.52
MDR1YGR100W THO2P53552 1597 aaKnown RBP5.53□□□□□ -1.52
MDR1YGR100W MYO4P32492 1471 aa5.52□□□□□ -1.53
MDR1YGR100W SMC4Q12267 1418 aa5.52□□□□□ -1.53
MDR1YGR100W YIR014WP40570 242 aa5.52□□□□□ -1.53
MDR1YGR100W KIP3P53086 805 aaKnown RBP5.52□□□□□ -1.53
MDR1YGR100W MLP2P40457 1679 aa5.52□□□□□ -1.53
MDR1YGR100W PRP3Q03338 469 aaPredicted RBP5.51□□□□□ -1.53
MDR1YGR100W RPN7Q06103 429 aaKnown RBP5.51□□□□□ -1.53
MDR1YGR100W NOT3P06102 836 aaKnown RBP5.51□□□□□ -1.53
MDR1YGR100W SNU71P53207 620 aaKnown RBP5.5□□□□□ -1.53
MDR1YGR100W MDG1P53885 366 aa5.5□□□□□ -1.53
MDR1YGR100W MSP1P28737 362 aa5.49□□□□□ -1.53
MDR1YGR100W ARL1P38116 183 aaKnown RBP5.49□□□□□ -1.53
MDR1YGR100W PLP2Q12017 286 aa5.49□□□□□ -1.53
MDR1YGR100W YPK9Q12697 1472 aa5.49□□□□□ -1.53
MDR1YGR100W MED8P38304 223 aa5.49□□□□□ -1.53
MDR1YGR100W RIM101P33400 625 aa5.48□□□□□ -1.53
MDR1YGR100W NST1P53935 1240 aa5.48□□□□□ -1.53
MDR1YGR100W REV3P14284 1504 aa5.48□□□□□ -1.53
MDR1YGR100W ABP1P15891 592 aaKnown RBP5.48□□□□□ -1.53
MDR1YGR100W ECM1P39715 212 aa5.48□□□□□ -1.53
MDR1YGR100W LTV1P34078 463 aa5.47□□□□□ -1.53
MDR1YGR100W EDE1P34216 1381 aa5.47□□□□□ -1.53
MDR1YGR100W TY1B-AO13527 1196 aaKnown RBP5.47□□□□□ -1.53
MDR1YGR100W SSA1P10591 642 aaKnown RBP5.47□□□□□ -1.53
MDR1YGR100W SSA2P10592 639 aaKnown RBP5.47□□□□□ -1.53
MDR1YGR100W HSL1P34244 1518 aa5.47□□□□□ -1.53
MDR1YGR100W SPB4P25808 606 aaPredicted RBP5.46□□□□□ -1.53
MDR1YGR100W RRP14P36080 434 aaKnown RBP5.46□□□□□ -1.53
MDR1YGR100W VPS24P36095 224 aaKnown RBP5.46□□□□□ -1.53
MDR1YGR100W YSH1Q06224 779 aaPredicted RBP5.46□□□□□ -1.53
MDR1YGR100W RVB2Q12464 471 aaKnown RBP5.46□□□□□ -1.53
MDR1YGR100W RAD2P07276 1031 aa5.45□□□□□ -1.54
MDR1YGR100W SUP35P05453 685 aaKnown RBP5.45□□□□□ -1.54
MDR1YGR100W DSF2P38213 736 aa5.45□□□□□ -1.54
MDR1YGR100W RSC1P53236 928 aa5.45□□□□□ -1.54
MDR1YGR100W MHP1P43638 1398 aa5.45□□□□□ -1.54
MDR1YGR100W MCM1P11746 286 aa5.45□□□□□ -1.54
MDR1YGR100W SAP190P36123 1033 aa5.45□□□□□ -1.54
MDR1YGR100W DNA2P38859 1522 aa5.44□□□□□ -1.54
MDR1YGR100W TPM2P40414 161 aa5.44□□□□□ -1.54
MDR1YGR100W BYE1P36106 594 aa5.44□□□□□ -1.54
MDR1YGR100W CLB1P24868 471 aa5.43□□□□□ -1.54
MDR1YGR100W TSC11P40061 1430 aa5.43□□□□□ -1.54
MDR1YGR100W POL1P13382 1468 aa5.43□□□□□ -1.54
MDR1YGR100W NOP8Q08287 484 aaPredicted RBP5.43□□□□□ -1.54
MDR1YGR100W IRC20Q06554 1556 aa5.42□□□□□ -1.54
MDR1YGR100W YCF1P39109 1515 aaKnown RBP5.42□□□□□ -1.54
MDR1YGR100W RSC8P43609 557 aaKnown RBP5.42□□□□□ -1.54
MDR1YGR100W NHA1Q99271 985 aa5.42□□□□□ -1.54
MDR1YGR100W TOP1P04786 769 aa5.42□□□□□ -1.54
MDR1YGR100W BDP1P46678 594 aa5.42□□□□□ -1.54
MDR1YGR100W TEA1P47988 759 aa5.42□□□□□ -1.54
MDR1YGR100W DEP1P31385 405 aa5.41□□□□□ -1.54
MDR1YGR100W RPS0AP32905 252 aaKnown RBP5.41□□□□□ -1.54
MDR1YGR100W TLG1Q03322 224 aa5.41□□□□□ -1.54
MDR1YGR100W UTP13Q05946 817 aaKnown RBP5.41□□□□□ -1.54
MDR1YGR100W HIR3P47171 1648 aa5.41□□□□□ -1.54
MDR1YGR100W SIN3P22579 1536 aa5.41□□□□□ -1.54
MDR1YGR100W SSK2P53599 1579 aa5.41□□□□□ -1.54
MDR1YGR100W LEM3P42838 414 aa5.41□□□□□ -1.54
MDR1YGR100W PDS5Q04264 1277 aa5.41□□□□□ -1.54
MDR1YGR100W PUP2P32379 260 aa5.4□□□□□ -1.54
MDR1YGR100W SEC9P40357 651 aa5.4□□□□□ -1.54
MDR1YGR100W RAD51P25454 400 aa5.4□□□□□ -1.55
MDR1YGR100W PSE1P32337 1089 aaKnown RBP5.4□□□□□ -1.55
MDR1YGR100W CBF5P33322 483 aaKnown RBP RIP-Chip data5.4□□□□□ -1.55not detected
MDR1YGR100W MGA2P40578 1113 aa5.4□□□□□ -1.55
MDR1YGR100W TAN1P53072 289 aaPredicted RBP5.4□□□□□ -1.55
MDR1YGR100W CDC45Q08032 650 aa5.4□□□□□ -1.55
MDR1YGR100W NOP14Q99207 810 aaKnown RBP5.4□□□□□ -1.55
MDR1YGR100W TRM3Q07527 1436 aa5.39□□□□□ -1.55
MDR1YGR100W TOA1P32773 286 aa5.39□□□□□ -1.55
MDR1YGR100W VPS27P40343 622 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms