RNA–Protein interactions for RNA: YGL079W

KXD1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene KXD1, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KXD1YGL079W GUT1P32190 709 aa9.54□□□□□ -0.88
KXD1YGL079W SET1P38827 1080 aaKnown RBP9.51□□□□□ -0.89
KXD1YGL079W JIP4Q03361 876 aa9.51□□□□□ -0.89
KXD1YGL079W SEC61P32915 480 aa9.5□□□□□ -0.89
KXD1YGL079W YEL023CP39992 682 aa9.5□□□□□ -0.89
KXD1YGL079W DAN4P47179 1161 aa9.49□□□□□ -0.89
KXD1YGL079W YJL171CP46992 396 aa9.47□□□□□ -0.89
KXD1YGL079W NCR1Q12200 1170 aa9.47□□□□□ -0.89
KXD1YGL079W PTC4P38089 393 aa9.46□□□□□ -0.9
KXD1YGL079W SOL3P38858 249 aa9.44□□□□□ -0.9
KXD1YGL079W NST1P53935 1240 aa9.44□□□□□ -0.9
KXD1YGL079W BMT6Q12291 365 aa9.41□□□□□ -0.9
KXD1YGL079W TFG1P41895 735 aaPredicted RBP9.38□□□□□ -0.91
KXD1YGL079W DMA1P38823 416 aa9.36□□□□□ -0.91
KXD1YGL079W YGR273CP53329 174 aa9.36□□□□□ -0.91
KXD1YGL079W YDL129WQ07555 291 aa9.35□□□□□ -0.91
KXD1YGL079W AI4P03878 556 aa9.33□□□□□ -0.92
KXD1YGL079W MPH3P0CE00 602 aa9.33□□□□□ -0.92
KXD1YGL079W ILV3P39522 585 aaKnown RBP9.32□□□□□ -0.92
KXD1YGL079W IFH1P39520 1085 aa9.31□□□□□ -0.92
KXD1YGL079W SAP30P38429 201 aa9.3□□□□□ -0.92
KXD1YGL079W PML39Q03760 334 aa9.3□□□□□ -0.92
KXD1YGL079W YPR148CQ06523 435 aa9.3□□□□□ -0.92
KXD1YGL079W MID1P41821 548 aa9.23□□□□□ -0.93
KXD1YGL079W KEX1P09620 729 aa9.21□□□□□ -0.94
KXD1YGL079W UBP14P38237 781 aaKnown RBP9.21□□□□□ -0.94
KXD1YGL079W YLR326WQ06170 240 aaKnown RBP9.21□□□□□ -0.94
KXD1YGL079W VHR2P40041 505 aa9.19□□□□□ -0.94
KXD1YGL079W VPS70P47161 811 aa9.19□□□□□ -0.94
KXD1YGL079W YDR344CQ05510 147 aa9.18□□□□□ -0.94
KXD1YGL079W SLI15P38283 698 aa9.17□□□□□ -0.94
KXD1YGL079W PRE3P38624 215 aa9.14□□□□□ -0.95
KXD1YGL079W RQC2Q12532 1038 aaKnown RBP9.14□□□□□ -0.95
KXD1YGL079W CHL1P22516 861 aaPredicted RBP9.13□□□□□ -0.95
KXD1YGL079W REF2P42073 533 aaPredicted RBP9.13□□□□□ -0.95
KXD1YGL079W PEX29Q03370 554 aa9.13□□□□□ -0.95
KXD1YGL079W RAD54P32863 898 aa9.11□□□□□ -0.95
KXD1YGL079W PCS60P38137 543 aaKnown RBP RIP-Chip data9.11□□□□□ -0.95not detected
KXD1YGL079W ARH1P48360 493 aa9.11□□□□□ -0.95
KXD1YGL079W MPC54Q08550 464 aa9.11□□□□□ -0.95
KXD1YGL079W SAS10Q12136 610 aaPredicted RBP9.11□□□□□ -0.95
KXD1YGL079W YDR090CQ03193 310 aa9.1□□□□□ -0.95
KXD1YGL079W ELP4Q02884 456 aaKnown RBP9.09□□□□□ -0.95
KXD1YGL079W DPL1Q05567 589 aa9.05□□□□□ -0.96
KXD1YGL079W CKB1P43639 278 aa9.04□□□□□ -0.96
KXD1YGL079W HAP5Q02516 242 aa9.04□□□□□ -0.96
KXD1YGL079W KIC1P38692 1080 aa9.02□□□□□ -0.97
KXD1YGL079W CDC73Q06697 393 aa9.02□□□□□ -0.97
KXD1YGL079W NMA111P53920 997 aa9.01□□□□□ -0.97
KXD1YGL079W MAK21Q12176 1025 aaKnown RBP9.01□□□□□ -0.97
KXD1YGL079W COX6P00427 148 aa8.99□□□□□ -0.97
KXD1YGL079W SPT23P35210 1082 aa8.99□□□□□ -0.97
KXD1YGL079W BNI4P53858 892 aa8.98□□□□□ -0.97
KXD1YGL079W BCK2P33306 851 aa8.97□□□□□ -0.97
KXD1YGL079W PBS2P08018 668 aa8.96□□□□□ -0.98
KXD1YGL079W ISU2Q12056 156 aa8.96□□□□□ -0.98
KXD1YGL079W RPP1BP10622 106 aaKnown RBP8.94□□□□□ -0.98
KXD1YGL079W GAP1P19145 602 aaPredicted RBP8.91□□□□□ -0.98
KXD1YGL079W PTC2P39966 464 aaKnown RBP8.91□□□□□ -0.98
KXD1YGL079W VRP1P37370 817 aa8.9□□□□□ -0.98
KXD1YGL079W ORC6P38826 435 aa8.9□□□□□ -0.98
KXD1YGL079W YML082WQ04533 649 aaKnown RBP8.89□□□□□ -0.99
KXD1YGL079W DSF2P38213 736 aa8.88□□□□□ -0.99
KXD1YGL079W CSC1Q06538 782 aa8.86□□□□□ -0.99
KXD1YGL079W RAM1P22007 431 aa8.85□□□□□ -0.99
KXD1YGL079W MAM3Q12296 706 aa8.84□□□□□ -0.99
KXD1YGL079W PDR1P12383 1068 aa8.83□□□□□ -1
KXD1YGL079W TFB4Q12004 338 aa8.83□□□□□ -1
KXD1YGL079W YPR015CQ12531 247 aa8.83□□□□□ -1
KXD1YGL079W SPB4P25808 606 aaPredicted RBP8.82□□□□□ -1
KXD1YGL079W XDJ1P39102 459 aa8.82□□□□□ -1
KXD1YGL079W PEX21P50091 288 aa8.82□□□□□ -1
KXD1YGL079W IES2P40154 320 aa8.8□□□□□ -1
KXD1YGL079W YRR1Q12172 810 aa8.8□□□□□ -1
KXD1YGL079W MVP1P40959 511 aaKnown RBP8.79□□□□□ -1
KXD1YGL079W RGR1P19263 1082 aa8.78□□□□□ -1
KXD1YGL079W TUM1Q08686 304 aaKnown RBP8.78□□□□□ -1
KXD1YGL079W NUP42P49686 430 aaKnown RBP8.75□□□□□ -1.01
KXD1YGL079W PSE1P32337 1089 aaKnown RBP8.74□□□□□ -1.01
KXD1YGL079W YPR109WQ06104 294 aa8.73□□□□□ -1.01
KXD1YGL079W NUD1P32336 851 aa8.71□□□□□ -1.02
KXD1YGL079W STR2P47164 639 aa8.69□□□□□ -1.02
KXD1YGL079W DIT2P21595 489 aa8.68□□□□□ -1.02
KXD1YGL079W ISM1P48526 1002 aa8.68□□□□□ -1.02
KXD1YGL079W BUD20Q08004 166 aaPredicted RBP8.67□□□□□ -1.02
KXD1YGL079W GYP1Q08484 637 aa8.66□□□□□ -1.02
KXD1YGL079W CLB5P30283 435 aa8.63□□□□□ -1.03
KXD1YGL079W NPL4P33755 580 aa8.62□□□□□ -1.03
KXD1YGL079W SAS4Q04003 481 aa8.62□□□□□ -1.03
KXD1YGL079W PRT1P06103 763 aaKnown RBP8.61□□□□□ -1.03
KXD1YGL079W DPS1P04802 557 aaKnown RBP8.6□□□□□ -1.03
KXD1YGL079W TY1A-DR4O74302 440 aa8.59□□□□□ -1.03
KXD1YGL079W TY1A-HP0C2I4 478 aaKnown RBP8.59□□□□□ -1.03
KXD1YGL079W TY1A-AP0CX57 440 aa8.59□□□□□ -1.03
KXD1YGL079W TY1A-PR1P0CX58 440 aa8.59□□□□□ -1.03
KXD1YGL079W TY1A-ORP0CX59 440 aa8.59□□□□□ -1.03
KXD1YGL079W TY1A-PR2P0CX60 440 aa8.59□□□□□ -1.03
KXD1YGL079W TY1A-DR5P0CX65 440 aa8.59□□□□□ -1.03
KXD1YGL079W TY1A-ER2P0CX66 440 aa8.59□□□□□ -1.03
KXD1YGL079W TY1A-GR3P0CX67 440 aa8.59□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms