RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeastyeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPA1YER049W YOR238WQ08634 303 aa5.95□□□□□ -1.46
TPA1YER049W BUD4P47136 1447 aa5.95□□□□□ -1.46
TPA1YER049W SPB4P25808 606 aaPredicted RBP5.95□□□□□ -1.46
TPA1YER049W NSR1P27476 414 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46not detected
TPA1YER049W MIF2P35201 549 aa5.94□□□□□ -1.46
TPA1YER049W BPT1P14772 1559 aa5.94□□□□□ -1.46
TPA1YER049W RPN1P38764 993 aaKnown RBP5.93□□□□□ -1.46
TPA1YER049W TIF4632P39936 914 aaKnown RBP5.93□□□□□ -1.46
TPA1YER049W NOP53Q12080 455 aaKnown RBP5.93□□□□□ -1.46
TPA1YER049W MYO4P32492 1471 aa5.93□□□□□ -1.46
TPA1YER049W TRM732Q03496 1420 aa5.92□□□□□ -1.46
TPA1YER049W YOR1P53049 1477 aa5.92□□□□□ -1.46
TPA1YER049W DNA2P38859 1522 aa5.92□□□□□ -1.46
TPA1YER049W RKR1Q04781 1562 aa5.91□□□□□ -1.46
TPA1YER049W DSF2P38213 736 aa5.91□□□□□ -1.46
TPA1YER049W PBS2P08018 668 aa5.9□□□□□ -1.46
TPA1YER049W TGL3P40308 642 aa5.9□□□□□ -1.46
TPA1YER049W PIB1Q06651 286 aa5.89□□□□□ -1.47
TPA1YER049W SCC2Q04002 1493 aa5.89□□□□□ -1.47
TPA1YER049W PTC3P34221 468 aaKnown RBP5.89□□□□□ -1.47
TPA1YER049W YAP5P40574 245 aa5.89□□□□□ -1.47
TPA1YER049W NUP170P38181 1502 aa5.89□□□□□ -1.47
TPA1YER049W PEP1P32319 1579 aa5.88□□□□□ -1.47
TPA1YER049W KOG1P38873 1557 aa5.88□□□□□ -1.47
TPA1YER049W IKI3Q06706 1349 aaKnown RBP5.88□□□□□ -1.47
TPA1YER049W RPO31P04051 1460 aa5.87□□□□□ -1.47
TPA1YER049W SMC4Q12267 1418 aa5.86□□□□□ -1.47
TPA1YER049W VMA1P17255 1071 aaKnown RBP5.86□□□□□ -1.47
TPA1YER049W REF2P42073 533 aaPredicted RBP5.85□□□□□ -1.47
TPA1YER049W TOP2P06786 1428 aaKnown RBP5.84□□□□□ -1.47
TPA1YER049W SPP41P38904 1435 aa5.84□□□□□ -1.47
TPA1YER049W SNQ2P32568 1501 aaKnown RBP5.83□□□□□ -1.48
TPA1YER049W YCF1P39109 1515 aaKnown RBP5.83□□□□□ -1.48
TPA1YER049W TY2B-LR1P0C2J3 1770 aa5.82□□□□□ -1.48
TPA1YER049W TY2B-FP0CX63 1770 aa5.82□□□□□ -1.48
TPA1YER049W TY2B-GR2P0CX64 1770 aa5.82□□□□□ -1.48
TPA1YER049W TY2B-CP25384 1770 aa5.82□□□□□ -1.48
TPA1YER049W TY2B-DR2Q03494 1770 aa5.82□□□□□ -1.48
TPA1YER049W TY1B-DR1Q03855 1755 aa5.82□□□□□ -1.48
TPA1YER049W TY2B-DR3Q07791 1770 aaKnown RBP5.82□□□□□ -1.48
TPA1YER049W TY2B-OR1Q12113 1770 aa5.82□□□□□ -1.48
TPA1YER049W TY2B-DR1Q12472 1770 aa5.82□□□□□ -1.48
TPA1YER049W TY2B-OR2Q12501 1770 aa5.82□□□□□ -1.48
TPA1YER049W TY1B-DR3Q99231 1755 aa5.82□□□□□ -1.48
TPA1YER049W MAM3Q12296 706 aa5.82□□□□□ -1.48
TPA1YER049W IES2P40154 320 aa5.81□□□□□ -1.48
TPA1YER049W MDS3P53094 1487 aa5.81□□□□□ -1.48
TPA1YER049W MLP2P40457 1679 aa5.8□□□□□ -1.48
TPA1YER049W YNR021WP53723 404 aaKnown RBP5.8□□□□□ -1.48
TPA1YER049W DMA2P53924 522 aa5.8□□□□□ -1.48
TPA1YER049W NUP42P49686 430 aaKnown RBP5.8□□□□□ -1.48
TPA1YER049W SAM3Q08986 587 aa5.79□□□□□ -1.48
TPA1YER049W MST1P07236 462 aa5.78□□□□□ -1.48
TPA1YER049W TY2B-BQ12491 1770 aa5.78□□□□□ -1.48
TPA1YER049W STH1P32597 1359 aa5.77□□□□□ -1.49
TPA1YER049W COX6P00427 148 aa5.77□□□□□ -1.49
TPA1YER049W DIT2P21595 489 aa5.77□□□□□ -1.49
TPA1YER049W GLC3P32775 704 aa5.77□□□□□ -1.49
TPA1YER049W ATH1P48016 1211 aa5.77□□□□□ -1.49
TPA1YER049W GRE2Q12068 342 aaKnown RBP5.77□□□□□ -1.49
TPA1YER049W MAK21Q12176 1025 aaKnown RBP5.77□□□□□ -1.49
TPA1YER049W SSM4P40318 1319 aa5.77□□□□□ -1.49
TPA1YER049W GUT1P32190 709 aa5.76□□□□□ -1.49
TPA1YER049W VHR2P40041 505 aa5.76□□□□□ -1.49
TPA1YER049W YDR090CQ03193 310 aa5.76□□□□□ -1.49
TPA1YER049W PDR15Q04182 1529 aaKnown RBP5.76□□□□□ -1.49
TPA1YER049W UBP14P38237 781 aaKnown RBP5.76□□□□□ -1.49
TPA1YER049W ULS1Q08562 1619 aa5.75□□□□□ -1.49
TPA1YER049W KIN1P13185 1064 aa5.75□□□□□ -1.49
TPA1YER049W YLR326WQ06170 240 aaKnown RBP5.75□□□□□ -1.49
TPA1YER049W GEA1P47102 1408 aaPredicted RBP5.74□□□□□ -1.49
TPA1YER049W NOP2P40991 618 aaKnown RBP5.74□□□□□ -1.49
TPA1YER049W AIM7Q12156 149 aa5.74□□□□□ -1.49
TPA1YER049W TY1B-HO13535 1793 aa5.73□□□□□ -1.49
TPA1YER049W TY1B-DR5P0C2I2 1755 aa5.73□□□□□ -1.49
TPA1YER049W TY1B-DR6P0C2I3 1755 aa5.73□□□□□ -1.49
TPA1YER049W TY1B-LR2P0C2I5 1755 aa5.73□□□□□ -1.49
TPA1YER049W TY1B-LR3P0C2I6 1755 aaKnown RBP5.73□□□□□ -1.49
TPA1YER049W TY1B-PR1P0C2I9 1755 aaKnown RBP5.73□□□□□ -1.49
TPA1YER049W TY1B-PR2P0C2J0 1756 aa5.73□□□□□ -1.49
TPA1YER049W TY1B-PR3P0C2J1 1755 aaKnown RBP5.73□□□□□ -1.49
TPA1YER049W TY1B-JR1P47098 1755 aa5.73□□□□□ -1.49
TPA1YER049W TY1B-ML2Q03434 1755 aaKnown RBP5.73□□□□□ -1.49
TPA1YER049W TY1B-ER1Q03612 1755 aa5.73□□□□□ -1.49
TPA1YER049W TY1B-ML1Q04711 1755 aaKnown RBP5.73□□□□□ -1.49
TPA1YER049W TY1B-GR2Q12269 1755 aa5.73□□□□□ -1.49
TPA1YER049W TY1B-OLQ12273 1755 aa5.73□□□□□ -1.49
TPA1YER049W TY1B-PLQ12414 1755 aaKnown RBP5.73□□□□□ -1.49
TPA1YER049W SOL3P38858 249 aa5.73□□□□□ -1.49
TPA1YER049W YGR273CP53329 174 aa5.73□□□□□ -1.49
TPA1YER049W GYP5Q12344 894 aa5.72□□□□□ -1.49
TPA1YER049W GTT3P39996 337 aa5.71□□□□□ -1.5
TPA1YER049W TY1B-BRQ12193 1756 aa5.71□□□□□ -1.5
TPA1YER049W TY1B-GR3Q12316 1755 aa5.71□□□□□ -1.5
TPA1YER049W TY1B-ORQ92393 1755 aa5.71□□□□□ -1.5
TPA1YER049W ABP1P15891 592 aaKnown RBP5.7□□□□□ -1.5
TPA1YER049W NST1P53935 1240 aa5.7□□□□□ -1.5
TPA1YER049W YOL036WQ08206 761 aa5.7□□□□□ -1.5
TPA1YER049W TSC11P40061 1430 aa5.7□□□□□ -1.5
TPA1YER049W TY3B-GQ99315 1547 aa5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms