RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C WSC3Q12215 556 aa9.56□□□□□ -0.88
LSM6YDR378C MSB4Q12317 492 aa9.55□□□□□ -0.88
LSM6YDR378C YGR273CP53329 174 aa9.54□□□□□ -0.88
LSM6YDR378C HTA1P04911 132 aaKnown RBP9.52□□□□□ -0.89
LSM6YDR378C HTA2P04912 132 aa9.52□□□□□ -0.89
LSM6YDR378C UBP14P38237 781 aaKnown RBP9.52□□□□□ -0.89
LSM6YDR378C IES2P40154 320 aa9.52□□□□□ -0.89
LSM6YDR378C KIC1P38692 1080 aa9.5□□□□□ -0.89
LSM6YDR378C YNR021WP53723 404 aaKnown RBP9.5□□□□□ -0.89
LSM6YDR378C TAF7Q05021 590 aa9.5□□□□□ -0.89
LSM6YDR378C YLR326WQ06170 240 aaKnown RBP9.49□□□□□ -0.89
LSM6YDR378C EAP1P36041 632 aaKnown RBP9.48□□□□□ -0.89
LSM6YDR378C SOL3P38858 249 aa9.48□□□□□ -0.89
LSM6YDR378C UBP9P39967 754 aa9.48□□□□□ -0.89
LSM6YDR378C YDR090CQ03193 310 aa9.46□□□□□ -0.9
LSM6YDR378C YBL029C-AQ3E756 94 aa9.46□□□□□ -0.9
LSM6YDR378C RAD54P32863 898 aa9.45□□□□□ -0.9
LSM6YDR378C NUP42P49686 430 aaKnown RBP9.45□□□□□ -0.9
LSM6YDR378C KEX1P09620 729 aa9.44□□□□□ -0.9
LSM6YDR378C DIT2P21595 489 aa9.44□□□□□ -0.9
LSM6YDR378C VNX1P42839 908 aa9.43□□□□□ -0.9
LSM6YDR378C GLC3P32775 704 aa9.41□□□□□ -0.9
LSM6YDR378C YEL023CP39992 682 aa9.41□□□□□ -0.9
LSM6YDR378C NST1P53935 1240 aa9.4□□□□□ -0.9
LSM6YDR378C TRP5P00931 707 aaKnown RBP9.39□□□□□ -0.91
LSM6YDR378C AI4P03878 556 aa9.39□□□□□ -0.91
LSM6YDR378C MPH3P0CE00 602 aa9.39□□□□□ -0.91
LSM6YDR378C PCS60P38137 543 aaKnown RBP RIP-Chip data9.39□□□□□ -0.91not detected
LSM6YDR378C TIF11P38912 153 aaKnown RBP9.39□□□□□ -0.91
LSM6YDR378C SPP1Q03012 353 aa9.39□□□□□ -0.91
LSM6YDR378C ULI1P43604 169 aa9.38□□□□□ -0.91
LSM6YDR378C ATF2P53296 535 aa9.38□□□□□ -0.91
LSM6YDR378C AIM7Q12156 149 aa9.38□□□□□ -0.91
LSM6YDR378C KIN1P13185 1064 aa9.37□□□□□ -0.91
LSM6YDR378C PTC4P38089 393 aa9.36□□□□□ -0.91
LSM6YDR378C JIP4Q03361 876 aa9.34□□□□□ -0.91
LSM6YDR378C DAN4P47179 1161 aa9.33□□□□□ -0.92
LSM6YDR378C PSE1P32337 1089 aaKnown RBP9.3□□□□□ -0.92
LSM6YDR378C ILV3P39522 585 aaKnown RBP9.3□□□□□ -0.92
LSM6YDR378C DMA2P53924 522 aa9.3□□□□□ -0.92
LSM6YDR378C RPP1BP10622 106 aaKnown RBP9.28□□□□□ -0.92
LSM6YDR378C IOC2Q12072 812 aa9.27□□□□□ -0.93
LSM6YDR378C SLI15P38283 698 aa9.26□□□□□ -0.93
LSM6YDR378C YNL035CP53962 389 aaKnown RBP9.26□□□□□ -0.93
LSM6YDR378C ORC6P38826 435 aa9.25□□□□□ -0.93
LSM6YDR378C LDB19Q12502 818 aa9.22□□□□□ -0.93
LSM6YDR378C RTG1P32607 177 aa9.2□□□□□ -0.94
LSM6YDR378C HGH1P48362 394 aaKnown RBP9.2□□□□□ -0.94
LSM6YDR378C TEA1P47988 759 aa9.19□□□□□ -0.94
LSM6YDR378C CSC1Q06538 782 aa9.19□□□□□ -0.94
LSM6YDR378C RGR1P19263 1082 aa9.18□□□□□ -0.94
LSM6YDR378C SEC61P32915 480 aa9.18□□□□□ -0.94
LSM6YDR378C TFG1P41895 735 aaPredicted RBP9.18□□□□□ -0.94
LSM6YDR378C PML39Q03760 334 aa9.18□□□□□ -0.94
LSM6YDR378C MVP1P40959 511 aaKnown RBP9.17□□□□□ -0.94
LSM6YDR378C BUD31P25337 157 aaPredicted RBP9.16□□□□□ -0.94
LSM6YDR378C GUA1P38625 525 aaKnown RBP9.16□□□□□ -0.94
LSM6YDR378C PEX21P50091 288 aa9.16□□□□□ -0.94
LSM6YDR378C CDC73Q06697 393 aa9.16□□□□□ -0.94
LSM6YDR378C CLB5P30283 435 aa9.15□□□□□ -0.94
LSM6YDR378C MID1P41821 548 aa9.15□□□□□ -0.94
LSM6YDR378C GAP1P19145 602 aaPredicted RBP9.13□□□□□ -0.95
LSM6YDR378C NCR1Q12200 1170 aa9.13□□□□□ -0.95
LSM6YDR378C PEX29Q03370 554 aa9.12□□□□□ -0.95
LSM6YDR378C DPL1Q05567 589 aa9.12□□□□□ -0.95
LSM6YDR378C TFB4Q12004 338 aa9.12□□□□□ -0.95
LSM6YDR378C YPR109WQ06104 294 aa9.11□□□□□ -0.95
LSM6YDR378C CSN12P47130 423 aa9.09□□□□□ -0.95
LSM6YDR378C HPC2Q01448 625 aa9.09□□□□□ -0.95
LSM6YDR378C MPC54Q08550 464 aa9.09□□□□□ -0.95
LSM6YDR378C SSA2P10592 639 aaKnown RBP9.08□□□□□ -0.96
LSM6YDR378C YDL129WQ07555 291 aa9.08□□□□□ -0.96
LSM6YDR378C TUM1Q08686 304 aaKnown RBP9.06□□□□□ -0.96
LSM6YDR378C ISU2Q12056 156 aa9.05□□□□□ -0.96
LSM6YDR378C YMR196WQ04336 1088 aa9.04□□□□□ -0.96
LSM6YDR378C BRL1P38770 471 aa9.03□□□□□ -0.96
LSM6YDR378C NMA111P53920 997 aa9.03□□□□□ -0.96
LSM6YDR378C NIS1P53939 407 aa9.02□□□□□ -0.97
LSM6YDR378C YRR1Q12172 810 aa9.02□□□□□ -0.97
LSM6YDR378C FKH1P40466 484 aa9.01□□□□□ -0.97
LSM6YDR378C TFB3Q03290 321 aa9.01□□□□□ -0.97
LSM6YDR378C FPK1P53739 893 aa9□□□□□ -0.97
LSM6YDR378C SAP30P38429 201 aa8.99□□□□□ -0.97
LSM6YDR378C GLN1P32288 370 aaKnown RBP8.98□□□□□ -0.97
LSM6YDR378C TYW1Q08960 810 aaKnown RBP8.98□□□□□ -0.97
LSM6YDR378C RLF2Q12495 606 aa8.98□□□□□ -0.97
LSM6YDR378C HST2P53686 357 aa8.97□□□□□ -0.97
LSM6YDR378C MMP1Q12372 583 aa8.96□□□□□ -0.98
LSM6YDR378C HAP5Q02516 242 aa8.95□□□□□ -0.98
LSM6YDR378C SIT4P20604 311 aa8.94□□□□□ -0.98
LSM6YDR378C KTR1P27810 393 aaKnown RBP8.94□□□□□ -0.98
LSM6YDR378C ARH1P48360 493 aa8.93□□□□□ -0.98
LSM6YDR378C AIR2Q12476 344 aaKnown RBP8.93□□□□□ -0.98
LSM6YDR378C SIS1P25294 352 aaKnown RBP8.92□□□□□ -0.98
LSM6YDR378C SCJ1P25303 377 aa8.91□□□□□ -0.98
LSM6YDR378C NPL4P33755 580 aa8.91□□□□□ -0.98
LSM6YDR378C ESS1P22696 170 aa8.9□□□□□ -0.98
LSM6YDR378C PKC1P24583 1151 aa8.9□□□□□ -0.98
LSM6YDR378C ELP4Q02884 456 aaKnown RBP8.9□□□□□ -0.98
LSM6YDR378C PKH3Q03306 898 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms