RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeastyeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP4YDR354W YEL023CP39992 682 aa10.47□□□□□ -0.73
TRP4YDR354W RTG1P32607 177 aa10.46□□□□□ -0.73
TRP4YDR354W SOL3P38858 249 aa10.46□□□□□ -0.73
TRP4YDR354W IFH1P39520 1085 aa10.45□□□□□ -0.74
TRP4YDR354W FKH1P40466 484 aa10.45□□□□□ -0.74
TRP4YDR354W YNL035CP53962 389 aaKnown RBP10.44□□□□□ -0.74
TRP4YDR354W YPR148CQ06523 435 aa10.44□□□□□ -0.74
TRP4YDR354W VPS70P47161 811 aa10.42□□□□□ -0.74
TRP4YDR354W NST1P53935 1240 aa10.42□□□□□ -0.74
TRP4YDR354W PTC4P38089 393 aa10.41□□□□□ -0.74
TRP4YDR354W JIP4Q03361 876 aa10.41□□□□□ -0.74
TRP4YDR354W AIR2Q12476 344 aaKnown RBP10.41□□□□□ -0.74
TRP4YDR354W DAN4P47179 1161 aa10.4□□□□□ -0.74
TRP4YDR354W YGR273CP53329 174 aa10.39□□□□□ -0.75
TRP4YDR354W SAS10Q12136 610 aaPredicted RBP10.38□□□□□ -0.75
TRP4YDR354W SEC61P32915 480 aa10.36□□□□□ -0.75
TRP4YDR354W NCR1Q12200 1170 aa10.36□□□□□ -0.75
TRP4YDR354W ILV3P39522 585 aaKnown RBP10.33□□□□□ -0.76
TRP4YDR354W MPH3P0CE00 602 aa10.31□□□□□ -0.76
TRP4YDR354W VHR2P40041 505 aa10.3□□□□□ -0.76
TRP4YDR354W AI4P03878 556 aa10.29□□□□□ -0.76
TRP4YDR354W TFG1P41895 735 aaPredicted RBP10.28□□□□□ -0.76
TRP4YDR354W UBP14P38237 781 aaKnown RBP10.27□□□□□ -0.77
TRP4YDR354W YJL171CP46992 396 aa10.27□□□□□ -0.77
TRP4YDR354W REF2P42073 533 aaPredicted RBP10.26□□□□□ -0.77
TRP4YDR354W YLR326WQ06170 240 aaKnown RBP10.26□□□□□ -0.77
TRP4YDR354W KEX1P09620 729 aa10.25□□□□□ -0.77
TRP4YDR354W PML39Q03760 334 aa10.25□□□□□ -0.77
TRP4YDR354W CKB1P43639 278 aa10.23□□□□□ -0.77
TRP4YDR354W YDL129WQ07555 291 aa10.22□□□□□ -0.77
TRP4YDR354W MID1P41821 548 aa10.21□□□□□ -0.77
TRP4YDR354W BMT6Q12291 365 aa10.21□□□□□ -0.77
TRP4YDR354W SAP30P38429 201 aa10.2□□□□□ -0.78
TRP4YDR354W YDR090CQ03193 310 aa10.18□□□□□ -0.78
TRP4YDR354W PCS60P38137 543 aaKnown RBP RIP-Chip data10.17□□□□□ -0.78not detected
TRP4YDR354W RAD54P32863 898 aa10.16□□□□□ -0.78
TRP4YDR354W SLI15P38283 698 aa10.16□□□□□ -0.78
TRP4YDR354W PBS2P08018 668 aa10.13□□□□□ -0.79
TRP4YDR354W KIC1P38692 1080 aa10.1□□□□□ -0.79
TRP4YDR354W COX6P00427 148 aa10.09□□□□□ -0.79
TRP4YDR354W SPB4P25808 606 aaPredicted RBP10.09□□□□□ -0.79
TRP4YDR354W YDR344CQ05510 147 aa10.09□□□□□ -0.79
TRP4YDR354W PEX29Q03370 554 aa10.08□□□□□ -0.8
TRP4YDR354W MAK21Q12176 1025 aaKnown RBP10.08□□□□□ -0.8
TRP4YDR354W MPC54Q08550 464 aa10.06□□□□□ -0.8
TRP4YDR354W DSF2P38213 736 aa10.04□□□□□ -0.8
TRP4YDR354W CDC73Q06697 393 aa10.04□□□□□ -0.8
TRP4YDR354W DPL1Q05567 589 aa10.01□□□□□ -0.81
TRP4YDR354W MAM3Q12296 706 aa10□□□□□ -0.81
TRP4YDR354W ELP4Q02884 456 aaKnown RBP9.99□□□□□ -0.81
TRP4YDR354W ARH1P48360 493 aa9.98□□□□□ -0.81
TRP4YDR354W NMA111P53920 997 aa9.98□□□□□ -0.81
TRP4YDR354W PRE3P38624 215 aa9.97□□□□□ -0.81
TRP4YDR354W IES2P40154 320 aa9.96□□□□□ -0.82
TRP4YDR354W CHL1P22516 861 aaPredicted RBP9.94□□□□□ -0.82
TRP4YDR354W ORC6P38826 435 aa9.94□□□□□ -0.82
TRP4YDR354W HAP5Q02516 242 aa9.94□□□□□ -0.82
TRP4YDR354W RPP1BP10622 106 aaKnown RBP9.93□□□□□ -0.82
TRP4YDR354W ISU2Q12056 156 aa9.9□□□□□ -0.82
TRP4YDR354W GAP1P19145 602 aaPredicted RBP9.89□□□□□ -0.83
TRP4YDR354W NUP42P49686 430 aaKnown RBP9.89□□□□□ -0.83
TRP4YDR354W DIT2P21595 489 aa9.87□□□□□ -0.83
TRP4YDR354W SPT23P35210 1082 aa9.86□□□□□ -0.83
TRP4YDR354W CSC1Q06538 782 aa9.86□□□□□ -0.83
TRP4YDR354W PEX21P50091 288 aa9.85□□□□□ -0.83
TRP4YDR354W BNI4P53858 892 aa9.85□□□□□ -0.83
TRP4YDR354W MVP1P40959 511 aaKnown RBP9.83□□□□□ -0.84
TRP4YDR354W RGR1P19263 1082 aa9.82□□□□□ -0.84
TRP4YDR354W TFB4Q12004 338 aa9.82□□□□□ -0.84
TRP4YDR354W PDR1P12383 1068 aa9.81□□□□□ -0.84
TRP4YDR354W YRR1Q12172 810 aa9.81□□□□□ -0.84
TRP4YDR354W PSE1P32337 1089 aaKnown RBP9.8□□□□□ -0.84
TRP4YDR354W TUM1Q08686 304 aaKnown RBP9.8□□□□□ -0.84
TRP4YDR354W LEU3P08638 886 aa9.79□□□□□ -0.84
TRP4YDR354W PTC2P39966 464 aaKnown RBP9.79□□□□□ -0.84
TRP4YDR354W YPR109WQ06104 294 aa9.77□□□□□ -0.85
TRP4YDR354W VRP1P37370 817 aa9.74□□□□□ -0.85
TRP4YDR354W RAM1P22007 431 aa9.73□□□□□ -0.85
TRP4YDR354W BCK2P33306 851 aa9.73□□□□□ -0.85
TRP4YDR354W YML082WQ04533 649 aaKnown RBP9.73□□□□□ -0.85
TRP4YDR354W YPR015CQ12531 247 aa9.73□□□□□ -0.85
TRP4YDR354W GLC3P32775 704 aa9.72□□□□□ -0.85
TRP4YDR354W YNR021WP53723 404 aaKnown RBP9.72□□□□□ -0.85
TRP4YDR354W NUD1P32336 851 aa9.68□□□□□ -0.86
TRP4YDR354W TEA1P47988 759 aa9.66□□□□□ -0.86
TRP4YDR354W ATF2P53296 535 aa9.66□□□□□ -0.86
TRP4YDR354W STR2P47164 639 aa9.65□□□□□ -0.86
TRP4YDR354W CLB5P30283 435 aa9.64□□□□□ -0.87
TRP4YDR354W ISM1P48526 1002 aa9.64□□□□□ -0.87
TRP4YDR354W BUD20Q08004 166 aaPredicted RBP9.61□□□□□ -0.87
TRP4YDR354W NPL4P33755 580 aa9.6□□□□□ -0.87
TRP4YDR354W RPN1P38764 993 aaKnown RBP9.59□□□□□ -0.87
TRP4YDR354W AIM7Q12156 149 aa9.58□□□□□ -0.88
TRP4YDR354W XDJ1P39102 459 aa9.57□□□□□ -0.88
TRP4YDR354W NIS1P53939 407 aa9.57□□□□□ -0.88
TRP4YDR354W KEX2P13134 814 aa9.55□□□□□ -0.88
TRP4YDR354W GCD11P32481 527 aaKnown RBP9.55□□□□□ -0.88
TRP4YDR354W ERF2Q06551 359 aa9.55□□□□□ -0.88
TRP4YDR354W GYP1Q08484 637 aa9.55□□□□□ -0.88
TRP4YDR354W TY1A-DR4O74302 440 aa9.53□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms