RNA–Protein interactions for RNA: YDR346C

SVF1, Transcript of Protein with a potential role in cell survival pathways, yeastyeast

Gene SVF1, Length 1,446 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SVF1YDR346C UBP9P39967 754 aa10.67□□□□□ -0.7
SVF1YDR346C YGR273CP53329 174 aa10.67□□□□□ -0.7
SVF1YDR346C HTA1P04911 132 aaKnown RBP10.66□□□□□ -0.7
SVF1YDR346C HTA2P04912 132 aa10.66□□□□□ -0.7
SVF1YDR346C ABP1P15891 592 aaKnown RBP10.65□□□□□ -0.7
SVF1YDR346C UBP14P38237 781 aaKnown RBP10.65□□□□□ -0.7
SVF1YDR346C YLR326WQ06170 240 aaKnown RBP10.63□□□□□ -0.71
SVF1YDR346C MAM3Q12296 706 aa10.62□□□□□ -0.71
SVF1YDR346C NST1P53935 1240 aa10.6□□□□□ -0.71
SVF1YDR346C COX6P00427 148 aa10.59□□□□□ -0.71
SVF1YDR346C TRP5P00931 707 aaKnown RBP10.59□□□□□ -0.71
SVF1YDR346C SPP1Q03012 353 aa10.59□□□□□ -0.71
SVF1YDR346C YDR090CQ03193 310 aa10.59□□□□□ -0.71
SVF1YDR346C EAP1P36041 632 aaKnown RBP10.58□□□□□ -0.72
SVF1YDR346C TIF11P38912 153 aaKnown RBP10.58□□□□□ -0.72
SVF1YDR346C IES2P40154 320 aa10.58□□□□□ -0.72
SVF1YDR346C ULI1P43604 169 aa10.58□□□□□ -0.72
SVF1YDR346C MAK21Q12176 1025 aaKnown RBP10.58□□□□□ -0.72
SVF1YDR346C KEX1P09620 729 aa10.57□□□□□ -0.72
SVF1YDR346C YEL023CP39992 682 aa10.57□□□□□ -0.72
SVF1YDR346C RPN1P38764 993 aaKnown RBP10.55□□□□□ -0.72
SVF1YDR346C ILV3P39522 585 aaKnown RBP10.53□□□□□ -0.72
SVF1YDR346C PCS60P38137 543 aaKnown RBP RIP-Chip data10.52□□□□□ -0.73not detected
SVF1YDR346C RAD54P32863 898 aa10.51□□□□□ -0.73
SVF1YDR346C KIC1P38692 1080 aa10.51□□□□□ -0.73
SVF1YDR346C NUP42P49686 430 aaKnown RBP10.51□□□□□ -0.73
SVF1YDR346C MPH3P0CE00 602 aa10.5□□□□□ -0.73
SVF1YDR346C DIT2P21595 489 aa10.5□□□□□ -0.73
SVF1YDR346C AI4P03878 556 aa10.49□□□□□ -0.73
SVF1YDR346C BUD31P25337 157 aaPredicted RBP10.49□□□□□ -0.73
SVF1YDR346C IOC2Q12072 812 aa10.49□□□□□ -0.73
SVF1YDR346C PTC4P38089 393 aa10.48□□□□□ -0.73
SVF1YDR346C DAN4P47179 1161 aa10.45□□□□□ -0.74
SVF1YDR346C YNR021WP53723 404 aaKnown RBP10.45□□□□□ -0.74
SVF1YDR346C GLC3P32775 704 aa10.44□□□□□ -0.74
SVF1YDR346C JIP4Q03361 876 aa10.43□□□□□ -0.74
SVF1YDR346C LDB19Q12502 818 aa10.43□□□□□ -0.74
SVF1YDR346C SLI15P38283 698 aa10.4□□□□□ -0.75
SVF1YDR346C YNL035CP53962 389 aaKnown RBP10.39□□□□□ -0.75
SVF1YDR346C RTG1P32607 177 aa10.38□□□□□ -0.75
SVF1YDR346C ORC6P38826 435 aa10.34□□□□□ -0.75
SVF1YDR346C PML39Q03760 334 aa10.33□□□□□ -0.76
SVF1YDR346C KIN1P13185 1064 aa10.33□□□□□ -0.76
SVF1YDR346C MID1P41821 548 aa10.33□□□□□ -0.76
SVF1YDR346C ATF2P53296 535 aa10.32□□□□□ -0.76
SVF1YDR346C CDC73Q06697 393 aa10.31□□□□□ -0.76
SVF1YDR346C AIM7Q12156 149 aa10.31□□□□□ -0.76
SVF1YDR346C PSE1P32337 1089 aaKnown RBP10.29□□□□□ -0.76
SVF1YDR346C SEC61P32915 480 aa10.29□□□□□ -0.76
SVF1YDR346C NCR1Q12200 1170 aa10.26□□□□□ -0.77
SVF1YDR346C RGR1P19263 1082 aa10.23□□□□□ -0.77
SVF1YDR346C FKH1P40466 484 aa10.23□□□□□ -0.77
SVF1YDR346C TFG1P41895 735 aaPredicted RBP10.23□□□□□ -0.77
SVF1YDR346C MVP1P40959 511 aaKnown RBP10.22□□□□□ -0.77
SVF1YDR346C RPP1BP10622 106 aaKnown RBP10.21□□□□□ -0.78
SVF1YDR346C GAP1P19145 602 aaPredicted RBP10.21□□□□□ -0.78
SVF1YDR346C DMA2P53924 522 aa10.21□□□□□ -0.78
SVF1YDR346C MPC54Q08550 464 aa10.21□□□□□ -0.78
SVF1YDR346C PEX29Q03370 554 aa10.2□□□□□ -0.78
SVF1YDR346C DPL1Q05567 589 aa10.2□□□□□ -0.78
SVF1YDR346C YDL129WQ07555 291 aa10.19□□□□□ -0.78
SVF1YDR346C CSC1Q06538 782 aa10.18□□□□□ -0.78
SVF1YDR346C TEA1P47988 759 aa10.16□□□□□ -0.78
SVF1YDR346C PEX21P50091 288 aa10.16□□□□□ -0.78
SVF1YDR346C AIR2Q12476 344 aaKnown RBP10.16□□□□□ -0.78
SVF1YDR346C SIS1P25294 352 aaKnown RBP10.15□□□□□ -0.79
SVF1YDR346C SAP30P38429 201 aa10.15□□□□□ -0.79
SVF1YDR346C YPR109WQ06104 294 aa10.15□□□□□ -0.79
SVF1YDR346C GUA1P38625 525 aaKnown RBP10.14□□□□□ -0.79
SVF1YDR346C TAF7Q05021 590 aa10.13□□□□□ -0.79
SVF1YDR346C NMA111P53920 997 aa10.12□□□□□ -0.79
SVF1YDR346C TUM1Q08686 304 aaKnown RBP10.12□□□□□ -0.79
SVF1YDR346C TFB4Q12004 338 aa10.12□□□□□ -0.79
SVF1YDR346C YDR344CQ05510 147 aa10.11□□□□□ -0.79
SVF1YDR346C ISU2Q12056 156 aa10.09□□□□□ -0.79
SVF1YDR346C YRR1Q12172 810 aa10.09□□□□□ -0.79
SVF1YDR346C CLB5P30283 435 aa10.07□□□□□ -0.8
SVF1YDR346C NIS1P53939 407 aa10.06□□□□□ -0.8
SVF1YDR346C CSN12P47130 423 aa10.03□□□□□ -0.8
SVF1YDR346C HAP5Q02516 242 aa10.02□□□□□ -0.81
SVF1YDR346C TYW1Q08960 810 aaKnown RBP10.02□□□□□ -0.81
SVF1YDR346C ARH1P48360 493 aa10.01□□□□□ -0.81
SVF1YDR346C PDR1P12383 1068 aa10□□□□□ -0.81
SVF1YDR346C FPK1P53739 893 aa10□□□□□ -0.81
SVF1YDR346C YJL171CP46992 396 aa9.99□□□□□ -0.81
SVF1YDR346C ELP4Q02884 456 aaKnown RBP9.99□□□□□ -0.81
SVF1YDR346C YMR196WQ04336 1088 aa9.99□□□□□ -0.81
SVF1YDR346C BMT6Q12291 365 aa9.99□□□□□ -0.81
SVF1YDR346C KTR1P27810 393 aaKnown RBP9.99□□□□□ -0.81
SVF1YDR346C SCJ1P25303 377 aa9.97□□□□□ -0.81
SVF1YDR346C HPC2Q01448 625 aa9.96□□□□□ -0.82
SVF1YDR346C TFB3Q03290 321 aa9.96□□□□□ -0.82
SVF1YDR346C SSA2P10592 639 aaKnown RBP9.94□□□□□ -0.82
SVF1YDR346C NUD1P32336 851 aa9.94□□□□□ -0.82
SVF1YDR346C SIT4P20604 311 aa9.92□□□□□ -0.82
SVF1YDR346C GLN1P32288 370 aaKnown RBP9.92□□□□□ -0.82
SVF1YDR346C HST2P53686 357 aa9.92□□□□□ -0.82
SVF1YDR346C MMP1Q12372 583 aa9.91□□□□□ -0.82
SVF1YDR346C ESS1P22696 170 aa9.9□□□□□ -0.82
SVF1YDR346C BNI4P53858 892 aa9.9□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms