RNA–Protein interactions for RNA: YDR308C

SRB7, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB7, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB7YDR308C ULI1P43604 169 aa8.08□□□□□ -1.12
SRB7YDR308C SPB4P25808 606 aaPredicted RBP8.07□□□□□ -1.12
SRB7YDR308C TRP5P00931 707 aaKnown RBP8.05□□□□□ -1.12
SRB7YDR308C REF2P42073 533 aaPredicted RBP8.02□□□□□ -1.13
SRB7YDR308C YEL023CP39992 682 aa8.01□□□□□ -1.13
SRB7YDR308C VHR2P40041 505 aa8.01□□□□□ -1.13
SRB7YDR308C PBS2P08018 668 aa7.99□□□□□ -1.13
SRB7YDR308C YGR273CP53329 174 aa7.99□□□□□ -1.13
SRB7YDR308C LDB19Q12502 818 aa7.99□□□□□ -1.13
SRB7YDR308C KIC1P38692 1080 aa7.97□□□□□ -1.13
SRB7YDR308C SIS1P25294 352 aaKnown RBP7.95□□□□□ -1.14
SRB7YDR308C JIP4Q03361 876 aa7.95□□□□□ -1.14
SRB7YDR308C IOC2Q12072 812 aa7.95□□□□□ -1.14
SRB7YDR308C PTC4P38089 393 aa7.94□□□□□ -1.14
SRB7YDR308C SOL3P38858 249 aa7.94□□□□□ -1.14
SRB7YDR308C RTG1P32607 177 aa7.93□□□□□ -1.14
SRB7YDR308C YNL035CP53962 389 aaKnown RBP7.93□□□□□ -1.14
SRB7YDR308C TFG1P41895 735 aaPredicted RBP7.92□□□□□ -1.14
SRB7YDR308C KEX1P09620 729 aa7.91□□□□□ -1.14
SRB7YDR308C RAD54P32863 898 aa7.91□□□□□ -1.14
SRB7YDR308C YLR326WQ06170 240 aaKnown RBP7.91□□□□□ -1.14
SRB7YDR308C MAM3Q12296 706 aa7.91□□□□□ -1.14
SRB7YDR308C UBP14P38237 781 aaKnown RBP7.9□□□□□ -1.14
SRB7YDR308C MAK21Q12176 1025 aaKnown RBP7.9□□□□□ -1.14
SRB7YDR308C AI4P03878 556 aa7.89□□□□□ -1.15
SRB7YDR308C MPH3P0CE00 602 aa7.89□□□□□ -1.15
SRB7YDR308C COX6P00427 148 aa7.87□□□□□ -1.15
SRB7YDR308C LEU3P08638 886 aa7.87□□□□□ -1.15
SRB7YDR308C DSF2P38213 736 aa7.87□□□□□ -1.15
SRB7YDR308C DAN4P47179 1161 aa7.87□□□□□ -1.15
SRB7YDR308C SEC61P32915 480 aa7.86□□□□□ -1.15
SRB7YDR308C NST1P53935 1240 aa7.86□□□□□ -1.15
SRB7YDR308C NCR1Q12200 1170 aa7.86□□□□□ -1.15
SRB7YDR308C IES2P40154 320 aa7.85□□□□□ -1.15
SRB7YDR308C PCS60P38137 543 aaKnown RBP RIP-Chip data7.84□□□□□ -1.15not detected
SRB7YDR308C YDR090CQ03193 310 aa7.84□□□□□ -1.15
SRB7YDR308C PML39Q03760 334 aa7.84□□□□□ -1.15
SRB7YDR308C ILV3P39522 585 aaKnown RBP7.83□□□□□ -1.16
SRB7YDR308C PEX29Q03370 554 aa7.83□□□□□ -1.16
SRB7YDR308C FKH1P40466 484 aa7.81□□□□□ -1.16
SRB7YDR308C RPP1BP10622 106 aaKnown RBP7.8□□□□□ -1.16
SRB7YDR308C SLI15P38283 698 aa7.8□□□□□ -1.16
SRB7YDR308C YJL171CP46992 396 aa7.8□□□□□ -1.16
SRB7YDR308C MID1P41821 548 aa7.78□□□□□ -1.16
SRB7YDR308C YDL129WQ07555 291 aa7.77□□□□□ -1.17
SRB7YDR308C SAP30P38429 201 aa7.76□□□□□ -1.17
SRB7YDR308C AIR2Q12476 344 aaKnown RBP7.76□□□□□ -1.17
SRB7YDR308C RPN1P38764 993 aaKnown RBP7.73□□□□□ -1.17
SRB7YDR308C DIT2P21595 489 aa7.72□□□□□ -1.17
SRB7YDR308C NUP42P49686 430 aaKnown RBP7.72□□□□□ -1.17
SRB7YDR308C BMT6Q12291 365 aa7.72□□□□□ -1.17
SRB7YDR308C PEX21P50091 288 aa7.71□□□□□ -1.18
SRB7YDR308C YNR021WP53723 404 aaKnown RBP7.71□□□□□ -1.18
SRB7YDR308C CDC73Q06697 393 aa7.71□□□□□ -1.18
SRB7YDR308C GLC3P32775 704 aa7.7□□□□□ -1.18
SRB7YDR308C LEO1P38439 464 aa7.7□□□□□ -1.18
SRB7YDR308C ATF2P53296 535 aa7.7□□□□□ -1.18
SRB7YDR308C DPL1Q05567 589 aa7.7□□□□□ -1.18
SRB7YDR308C MPC54Q08550 464 aa7.69□□□□□ -1.18
SRB7YDR308C ORC6P38826 435 aa7.67□□□□□ -1.18
SRB7YDR308C PSE1P32337 1089 aaKnown RBP7.66□□□□□ -1.18
SRB7YDR308C ELP4Q02884 456 aaKnown RBP7.66□□□□□ -1.18
SRB7YDR308C CSC1Q06538 782 aa7.65□□□□□ -1.18
SRB7YDR308C NMA111P53920 997 aa7.64□□□□□ -1.19
SRB7YDR308C ISU2Q12056 156 aa7.62□□□□□ -1.19
SRB7YDR308C MVP1P40959 511 aaKnown RBP7.61□□□□□ -1.19
SRB7YDR308C HAP5Q02516 242 aa7.61□□□□□ -1.19
SRB7YDR308C TUM1Q08686 304 aaKnown RBP7.61□□□□□ -1.19
SRB7YDR308C RGR1P19263 1082 aa7.6□□□□□ -1.19
SRB7YDR308C TFB4Q12004 338 aa7.6□□□□□ -1.19
SRB7YDR308C TEA1P47988 759 aa7.59□□□□□ -1.19
SRB7YDR308C ARH1P48360 493 aa7.59□□□□□ -1.19
SRB7YDR308C YPR109WQ06104 294 aa7.59□□□□□ -1.19
SRB7YDR308C AIM7Q12156 149 aa7.59□□□□□ -1.19
SRB7YDR308C YRR1Q12172 810 aa7.59□□□□□ -1.19
SRB7YDR308C KIN1P13185 1064 aa7.58□□□□□ -1.2
SRB7YDR308C CLB5P30283 435 aa7.57□□□□□ -1.2
SRB7YDR308C GAP1P19145 602 aaPredicted RBP7.56□□□□□ -1.2
SRB7YDR308C YDR344CQ05510 147 aa7.56□□□□□ -1.2
SRB7YDR308C PRE3P38624 215 aa7.54□□□□□ -1.2
SRB7YDR308C SPT23P35210 1082 aa7.53□□□□□ -1.2
SRB7YDR308C PTC2P39966 464 aaKnown RBP7.53□□□□□ -1.2
SRB7YDR308C CHL1P22516 861 aaPredicted RBP7.52□□□□□ -1.21
SRB7YDR308C YMR196WQ04336 1088 aa7.52□□□□□ -1.21
SRB7YDR308C NPL4P33755 580 aa7.51□□□□□ -1.21
SRB7YDR308C BNI4P53858 892 aa7.51□□□□□ -1.21
SRB7YDR308C PDR1P12383 1068 aa7.5□□□□□ -1.21
SRB7YDR308C NUD1P32336 851 aa7.48□□□□□ -1.21
SRB7YDR308C NIS1P53939 407 aa7.46□□□□□ -1.22
SRB7YDR308C CSN12P47130 423 aa7.43□□□□□ -1.22
SRB7YDR308C FPK1P53739 893 aa7.42□□□□□ -1.22
SRB7YDR308C KEX2P13134 814 aa7.41□□□□□ -1.22
SRB7YDR308C GCD11P32481 527 aaKnown RBP7.41□□□□□ -1.22
SRB7YDR308C GLN1P32288 370 aaKnown RBP7.4□□□□□ -1.22
SRB7YDR308C GUA1P38625 525 aaKnown RBP7.4□□□□□ -1.22
SRB7YDR308C TYW1Q08960 810 aaKnown RBP7.4□□□□□ -1.22
SRB7YDR308C SSA2P10592 639 aaKnown RBP7.39□□□□□ -1.23
SRB7YDR308C HGH1P48362 394 aaKnown RBP7.39□□□□□ -1.23
SRB7YDR308C ISM1P48526 1002 aa7.39□□□□□ -1.23
SRB7YDR308C YML082WQ04533 649 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms