RNA–Protein interactions for RNA: YDR207C

UME6, Transcript of Rpd3L histone deacetylase complex subunit, yeastyeast

Gene UME6, Length 2,511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME6YDR207C DJP1P40564 432 aa13.08□□□□□ -0.32
UME6YDR207C PSD2P53037 1138 aaKnown RBP13.08□□□□□ -0.32
UME6YDR207C DOS2P54858 310 aa13.07□□□□□ -0.32
UME6YDR207C GRX3Q03835 250 aa13.07□□□□□ -0.32
UME6YDR207C IFH1P39520 1085 aa13.07□□□□□ -0.32
UME6YDR207C PIL1P53252 339 aaKnown RBP13.07□□□□□ -0.32
UME6YDR207C MSH3P25336 1018 aa13.05□□□□□ -0.32
UME6YDR207C ETT1Q08421 412 aaKnown RBP13.05□□□□□ -0.32
UME6YDR207C YLR419WQ06698 1435 aaKnown RBP13.05□□□□□ -0.32
UME6YDR207C SIC1P38634 284 aa13.04□□□□□ -0.32
UME6YDR207C MSH4P40965 878 aaPredicted RBP13.03□□□□□ -0.32
UME6YDR207C RPN1P38764 993 aaKnown RBP13.01□□□□□ -0.33
UME6YDR207C CLB5P30283 435 aa13□□□□□ -0.33
UME6YDR207C YIR014WP40570 242 aa12.99□□□□□ -0.33
UME6YDR207C SPT6P23615 1451 aaKnown RBP12.98□□□□□ -0.33
UME6YDR207C NNF2P53253 936 aa12.97□□□□□ -0.33
UME6YDR207C DSN1P40568 576 aa12.97□□□□□ -0.33
UME6YDR207C PRP3Q03338 469 aaPredicted RBP12.97□□□□□ -0.33
UME6YDR207C MYO4P32492 1471 aa12.96□□□□□ -0.33
UME6YDR207C NOT3P06102 836 aaKnown RBP12.96□□□□□ -0.33
UME6YDR207C MYO2P19524 1574 aaKnown RBP12.95□□□□□ -0.34
UME6YDR207C ECM16Q04217 1267 aaKnown RBP12.93□□□□□ -0.34
UME6YDR207C BMS1Q08965 1183 aaKnown RBP12.91□□□□□ -0.34
UME6YDR207C THO2P53552 1597 aaKnown RBP12.9□□□□□ -0.34
UME6YDR207C YPK9Q12697 1472 aa12.9□□□□□ -0.34
UME6YDR207C BYE1P36106 594 aa12.9□□□□□ -0.34
UME6YDR207C PCT1P13259 424 aa12.89□□□□□ -0.35
UME6YDR207C KNS1P32350 737 aaPredicted RBP12.89□□□□□ -0.35
UME6YDR207C LTV1P34078 463 aa12.89□□□□□ -0.35
UME6YDR207C EDE1P34216 1381 aa12.89□□□□□ -0.35
UME6YDR207C NUP170P38181 1502 aa12.88□□□□□ -0.35
UME6YDR207C MED8P38304 223 aa12.88□□□□□ -0.35
UME6YDR207C ABP1P15891 592 aaKnown RBP12.87□□□□□ -0.35
UME6YDR207C RPN7Q06103 429 aaKnown RBP12.87□□□□□ -0.35
UME6YDR207C SMC4Q12267 1418 aa12.86□□□□□ -0.35
UME6YDR207C MSP1P28737 362 aa12.85□□□□□ -0.35
UME6YDR207C ECM1P39715 212 aa12.84□□□□□ -0.35
UME6YDR207C ARL1P38116 183 aaKnown RBP12.83□□□□□ -0.36
UME6YDR207C TIF4632P39936 914 aaKnown RBP12.83□□□□□ -0.36
UME6YDR207C TAN1P53072 289 aaPredicted RBP12.82□□□□□ -0.36
UME6YDR207C YSH1Q06224 779 aaPredicted RBP12.81□□□□□ -0.36
UME6YDR207C TAF2P23255 1407 aa12.8□□□□□ -0.36
UME6YDR207C KIP3P53086 805 aaKnown RBP12.8□□□□□ -0.36
UME6YDR207C NOP8Q08287 484 aaPredicted RBP12.8□□□□□ -0.36
UME6YDR207C VPS24P36095 224 aaKnown RBP12.8□□□□□ -0.36
UME6YDR207C NST1P53935 1240 aa12.79□□□□□ -0.36
UME6YDR207C PAP2P53632 584 aaKnown RBP12.79□□□□□ -0.36
UME6YDR207C MLP2P40457 1679 aa12.78□□□□□ -0.36
UME6YDR207C CBF5P33322 483 aaKnown RBP RIP-Chip data12.77□□□□□ -0.37not detected
UME6YDR207C TPM2P40414 161 aa12.77□□□□□ -0.37
UME6YDR207C RAD2P07276 1031 aa12.76□□□□□ -0.37
UME6YDR207C SAP190P36123 1033 aa12.76□□□□□ -0.37
UME6YDR207C CLB1P24868 471 aa12.76□□□□□ -0.37
UME6YDR207C STU1P38198 1513 aa12.75□□□□□ -0.37
UME6YDR207C SNU71P53207 620 aaKnown RBP12.75□□□□□ -0.37
UME6YDR207C IRC20Q06554 1556 aa12.74□□□□□ -0.37
UME6YDR207C RPS0AP32905 252 aaKnown RBP12.74□□□□□ -0.37
UME6YDR207C SRP54P20424 541 aaKnown RBP12.72□□□□□ -0.37
UME6YDR207C DEP1P31385 405 aa12.72□□□□□ -0.37
UME6YDR207C PAN1P32521 1480 aa12.71□□□□□ -0.37
UME6YDR207C RSC1P53236 928 aa12.71□□□□□ -0.37
UME6YDR207C RRP14P36080 434 aaKnown RBP12.7□□□□□ -0.38
UME6YDR207C CIN4P39110 191 aa12.7□□□□□ -0.38
UME6YDR207C MDG1P53885 366 aa12.7□□□□□ -0.38
UME6YDR207C NOP14Q99207 810 aaKnown RBP12.7□□□□□ -0.38
UME6YDR207C SCC2Q04002 1493 aa12.7□□□□□ -0.38
UME6YDR207C RIM101P33400 625 aa12.69□□□□□ -0.38
UME6YDR207C VPS60Q03390 229 aa12.69□□□□□ -0.38
UME6YDR207C CHZ1P40019 153 aaPredicted RBP12.68□□□□□ -0.38
UME6YDR207C RAD51P25454 400 aa12.68□□□□□ -0.38
UME6YDR207C SPB4P25808 606 aaPredicted RBP12.68□□□□□ -0.38
UME6YDR207C TY1B-DR4Q07793 1604 aa12.67□□□□□ -0.38
UME6YDR207C TLG1Q03322 224 aa12.66□□□□□ -0.38
UME6YDR207C MHP1P43638 1398 aa12.66□□□□□ -0.38
UME6YDR207C UTP13Q05946 817 aaKnown RBP12.65□□□□□ -0.38
UME6YDR207C REV3P14284 1504 aa12.65□□□□□ -0.38
UME6YDR207C TEA1P47988 759 aa12.65□□□□□ -0.38
UME6YDR207C TRM3Q07527 1436 aa12.65□□□□□ -0.39
UME6YDR207C TCD1P38756 429 aa12.64□□□□□ -0.39
UME6YDR207C RNT1Q02555 471 aa12.64□□□□□ -0.39
UME6YDR207C RSC8P43609 557 aaKnown RBP12.63□□□□□ -0.39
UME6YDR207C UBP10P53874 792 aaPredicted RBP12.63□□□□□ -0.39
UME6YDR207C RVB2Q12464 471 aaKnown RBP12.63□□□□□ -0.39
UME6YDR207C BPT1P14772 1559 aa12.62□□□□□ -0.39
UME6YDR207C SWI3P32591 825 aa12.62□□□□□ -0.39
UME6YDR207C HOS3Q02959 697 aaKnown RBP12.61□□□□□ -0.39
UME6YDR207C ESC2Q06340 456 aa12.61□□□□□ -0.39
UME6YDR207C VPS72Q03388 795 aa12.6□□□□□ -0.39
UME6YDR207C RRP15Q06511 250 aaPredicted RBP12.6□□□□□ -0.39
UME6YDR207C NHA1Q99271 985 aa12.6□□□□□ -0.39
UME6YDR207C SIN3P22579 1536 aa12.6□□□□□ -0.39
UME6YDR207C SSA1P10591 642 aaKnown RBP12.58□□□□□ -0.4
UME6YDR207C SSA2P10592 639 aaKnown RBP12.58□□□□□ -0.4
UME6YDR207C BDP1P46678 594 aa12.58□□□□□ -0.4
UME6YDR207C TOP1P04786 769 aa12.58□□□□□ -0.4
UME6YDR207C ORC1P54784 914 aaPredicted RBP12.58□□□□□ -0.4
UME6YDR207C TY1B-AO13527 1196 aaKnown RBP12.57□□□□□ -0.4
UME6YDR207C SUP35P05453 685 aaKnown RBP12.57□□□□□ -0.4
UME6YDR207C PSE1P32337 1089 aaKnown RBP12.57□□□□□ -0.4
UME6YDR207C ERV41Q04651 352 aa12.57□□□□□ -0.4
Retrieved 100 of 5,963 RNA–protein pairs in 126.2 ms