RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W GLC3P32775 704 aa7.09□□□□□ -1.27
FOB1YDR110W KIP3P53086 805 aaKnown RBP7.09□□□□□ -1.27
FOB1YDR110W YAF9P53930 226 aa7.09□□□□□ -1.27
FOB1YDR110W YPR148CQ06523 435 aa7.09□□□□□ -1.27
FOB1YDR110W DSF2P38213 736 aa7.08□□□□□ -1.28
FOB1YDR110W NAB3P38996 802 aaKnown RBP RIP-Chip data7.08□□□□□ -1.28not detected
FOB1YDR110W SEN54Q02825 467 aaPredicted RBP7.07□□□□□ -1.28
FOB1YDR110W AIM21P40563 679 aa7.07□□□□□ -1.28
FOB1YDR110W MGA2P40578 1113 aa7.06□□□□□ -1.28
FOB1YDR110W SPT21P35209 758 aa7.04□□□□□ -1.28
FOB1YDR110W BRE1Q07457 700 aaKnown RBP7.04□□□□□ -1.28
FOB1YDR110W HEM3P28789 327 aa7.03□□□□□ -1.28
FOB1YDR110W TOM20P35180 183 aa7.03□□□□□ -1.28
FOB1YDR110W PMC1P38929 1173 aaPredicted RBP7.03□□□□□ -1.28
FOB1YDR110W AIM7Q12156 149 aa7.03□□□□□ -1.28
FOB1YDR110W NMD2P38798 1089 aaKnown RBP7.02□□□□□ -1.29
FOB1YDR110W SET1P38827 1080 aaKnown RBP7.02□□□□□ -1.29
FOB1YDR110W GAL11P19659 1081 aa7.01□□□□□ -1.29
FOB1YDR110W TY4A-JP47023 414 aa7.01□□□□□ -1.29
FOB1YDR110W FPR4Q06205 392 aaPredicted RBP7.01□□□□□ -1.29
FOB1YDR110W RPA135P22138 1203 aaKnown RBP7.01□□□□□ -1.29
FOB1YDR110W TFB3Q03290 321 aa7.01□□□□□ -1.29
FOB1YDR110W CST9Q06032 482 aa7.01□□□□□ -1.29
FOB1YDR110W CST6P40535 587 aa7□□□□□ -1.29
FOB1YDR110W KOG1P38873 1557 aa6.99□□□□□ -1.29
FOB1YDR110W KEX1P09620 729 aa6.98□□□□□ -1.29
FOB1YDR110W PBS2P08018 668 aa6.98□□□□□ -1.29
FOB1YDR110W HPC2Q01448 625 aa6.98□□□□□ -1.29
FOB1YDR110W PSH1Q12161 406 aa6.98□□□□□ -1.29
FOB1YDR110W RAD2P07276 1031 aa6.96□□□□□ -1.29
FOB1YDR110W PKC1P24583 1151 aa6.96□□□□□ -1.29
FOB1YDR110W RNH70P53331 553 aa6.96□□□□□ -1.29
FOB1YDR110W MPE1P35728 441 aaKnown RBP6.96□□□□□ -1.3
FOB1YDR110W RPT2P40327 437 aaKnown RBP6.96□□□□□ -1.3
FOB1YDR110W NHA1Q99271 985 aa6.96□□□□□ -1.3
FOB1YDR110W DAL5P15365 543 aa6.95□□□□□ -1.3
FOB1YDR110W SSA4P22202 642 aaKnown RBP6.95□□□□□ -1.3
FOB1YDR110W GLN1P32288 370 aaKnown RBP6.95□□□□□ -1.3
FOB1YDR110W RPS0AP32905 252 aaKnown RBP6.95□□□□□ -1.3
FOB1YDR110W ITT1Q04638 464 aa6.95□□□□□ -1.3
FOB1YDR110W SSA2P10592 639 aaKnown RBP6.94□□□□□ -1.3
FOB1YDR110W TSR4P25040 408 aa6.94□□□□□ -1.3
FOB1YDR110W CDC3P32457 520 aaKnown RBP6.94□□□□□ -1.3
FOB1YDR110W CAB3P36076 571 aa6.94□□□□□ -1.3
FOB1YDR110W MPP10P47083 593 aaKnown RBP6.94□□□□□ -1.3
FOB1YDR110W GIR2Q03768 265 aaPredicted RBP6.94□□□□□ -1.3
FOB1YDR110W DIT2P21595 489 aa6.93□□□□□ -1.3
FOB1YDR110W BIM1P40013 344 aa6.93□□□□□ -1.3
FOB1YDR110W TPM2P40414 161 aa6.93□□□□□ -1.3
FOB1YDR110W YIL055CP40523 627 aaKnown RBP6.93□□□□□ -1.3
FOB1YDR110W NNF1P47149 201 aa6.93□□□□□ -1.3
FOB1YDR110W ALD2P47771 506 aa6.93□□□□□ -1.3
FOB1YDR110W RAM2P29703 316 aa6.92□□□□□ -1.3
FOB1YDR110W YDL121CQ07541 149 aa6.92□□□□□ -1.3
FOB1YDR110W HSL1P34244 1518 aa6.91□□□□□ -1.3
FOB1YDR110W ATG32P40458 529 aa6.9□□□□□ -1.3
FOB1YDR110W YOL057WQ08225 711 aa6.9□□□□□ -1.3
FOB1YDR110W NOB1Q08444 459 aaKnown RBP6.9□□□□□ -1.3
FOB1YDR110W SPT6P23615 1451 aaKnown RBP6.9□□□□□ -1.3
FOB1YDR110W SPT16P32558 1035 aaKnown RBP6.9□□□□□ -1.31
FOB1YDR110W NUP42P49686 430 aaKnown RBP6.9□□□□□ -1.31
FOB1YDR110W CPS1P27614 576 aa6.89□□□□□ -1.31
FOB1YDR110W ERP2P39704 215 aa6.89□□□□□ -1.31
FOB1YDR110W RPL34AP87262 121 aaPredicted RBP6.89□□□□□ -1.31
FOB1YDR110W TAF13P11747 167 aa6.88□□□□□ -1.31
FOB1YDR110W VMA4P22203 233 aaKnown RBP6.88□□□□□ -1.31
FOB1YDR110W TIF4632P39936 914 aaKnown RBP6.88□□□□□ -1.31
FOB1YDR110W BOI2P39969 1040 aa6.88□□□□□ -1.31
FOB1YDR110W IPL1P38991 367 aa6.87□□□□□ -1.31
FOB1YDR110W IES2P40154 320 aa6.87□□□□□ -1.31
FOB1YDR110W HAT1Q12341 374 aa6.87□□□□□ -1.31
FOB1YDR110W YJL007CP47080 104 aa6.87□□□□□ -1.31
FOB1YDR110W ECM16Q04217 1267 aaKnown RBP6.87□□□□□ -1.31
FOB1YDR110W ERG12P07277 443 aa6.86□□□□□ -1.31
FOB1YDR110W REB1P21538 810 aa6.85□□□□□ -1.31
FOB1YDR110W POL5P39985 1022 aaKnown RBP6.85□□□□□ -1.31
FOB1YDR110W ISW2Q08773 1120 aa6.85□□□□□ -1.31
FOB1YDR110W SSB1P11484 613 aaKnown RBP6.84□□□□□ -1.31
FOB1YDR110W RRP14P36080 434 aaKnown RBP6.84□□□□□ -1.31
FOB1YDR110W SSB2P40150 613 aaKnown RBP6.84□□□□□ -1.31
FOB1YDR110W YOL098CQ12496 1037 aa6.84□□□□□ -1.31
FOB1YDR110W PPG1P32838 368 aa6.84□□□□□ -1.31
FOB1YDR110W DNM1P54861 757 aa6.84□□□□□ -1.31
FOB1YDR110W TMA64Q04600 565 aaKnown RBP6.84□□□□□ -1.31
FOB1YDR110W BIO2P32451 375 aa6.83□□□□□ -1.32
FOB1YDR110W DEF1P35732 738 aaKnown RBP6.83□□□□□ -1.32
FOB1YDR110W RRP15Q06511 250 aaPredicted RBP6.83□□□□□ -1.32
FOB1YDR110W MAK21Q12176 1025 aaKnown RBP6.83□□□□□ -1.32
FOB1YDR110W SPA2P23201 1466 aaKnown RBP6.82□□□□□ -1.32
FOB1YDR110W FPR3P38911 411 aaKnown RBP6.82□□□□□ -1.32
FOB1YDR110W TLG1Q03322 224 aa6.82□□□□□ -1.32
FOB1YDR110W TTI1P36097 1038 aa6.81□□□□□ -1.32
FOB1YDR110W RPG1P38249 964 aaKnown RBP6.81□□□□□ -1.32
FOB1YDR110W YMR196WQ04336 1088 aa6.81□□□□□ -1.32
FOB1YDR110W PSK2Q08217 1101 aa6.81□□□□□ -1.32
FOB1YDR110W VPS27P40343 622 aaKnown RBP6.81□□□□□ -1.32
FOB1YDR110W TFG1P41895 735 aaPredicted RBP6.81□□□□□ -1.32
FOB1YDR110W ALG12P53730 551 aa6.81□□□□□ -1.32
FOB1YDR110W MEH1Q02205 184 aa6.81□□□□□ -1.32
FOB1YDR110W YML083CQ04526 418 aa6.81□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 77.7 ms