RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W YFR016CP43597 1233 aaKnown RBP5.62□□□□□ -1.51
TRS85YDR108W DAN4P47179 1161 aa5.61□□□□□ -1.51
TRS85YDR108W SPA2P23201 1466 aaKnown RBP5.61□□□□□ -1.51
TRS85YDR108W LEO1P38439 464 aa5.59□□□□□ -1.51
TRS85YDR108W GYP5Q12344 894 aa5.55□□□□□ -1.52
TRS85YDR108W SAP30P38429 201 aa5.54□□□□□ -1.52
TRS85YDR108W JIP4Q03361 876 aa5.54□□□□□ -1.52
TRS85YDR108W ABP1P15891 592 aaKnown RBP5.53□□□□□ -1.52
TRS85YDR108W DCW1P36091 449 aa5.52□□□□□ -1.53
TRS85YDR108W RPS0BP46654 252 aaKnown RBP5.52□□□□□ -1.53
TRS85YDR108W HTA1P04911 132 aaKnown RBP5.52□□□□□ -1.53
TRS85YDR108W HTA2P04912 132 aa5.52□□□□□ -1.53
TRS85YDR108W YEL023CP39992 682 aa5.51□□□□□ -1.53
TRS85YDR108W TFG1P41895 735 aaPredicted RBP5.51□□□□□ -1.53
TRS85YDR108W YDL129WQ07555 291 aa5.51□□□□□ -1.53
TRS85YDR108W PTC4P38089 393 aa5.5□□□□□ -1.53
TRS85YDR108W TCB2P48231 1178 aa5.49□□□□□ -1.53
TRS85YDR108W ENP1P38333 483 aaKnown RBP5.48□□□□□ -1.53
TRS85YDR108W SSN2P38931 1420 aa5.48□□□□□ -1.53
TRS85YDR108W MNN4P36044 1178 aa5.47□□□□□ -1.53
TRS85YDR108W YDR344CQ05510 147 aa5.47□□□□□ -1.53
TRS85YDR108W CHL1P22516 861 aaPredicted RBP5.46□□□□□ -1.53
TRS85YDR108W PRE3P38624 215 aa5.46□□□□□ -1.54
TRS85YDR108W BCK2P33306 851 aa5.45□□□□□ -1.54
TRS85YDR108W CWC22P53333 577 aaKnown RBP5.44□□□□□ -1.54
TRS85YDR108W RAM2P29703 316 aa5.43□□□□□ -1.54
TRS85YDR108W GRE2Q12068 342 aaKnown RBP5.43□□□□□ -1.54
TRS85YDR108W EDS1P38073 919 aa5.43□□□□□ -1.54
TRS85YDR108W TCB3Q03640 1545 aaKnown RBP5.41□□□□□ -1.54
TRS85YDR108W MAK11P20484 414 aaKnown RBP5.41□□□□□ -1.54
TRS85YDR108W SGS1P35187 1447 aa5.41□□□□□ -1.54
TRS85YDR108W NST1P53935 1240 aa5.41□□□□□ -1.54
TRS85YDR108W PML39Q03760 334 aa5.41□□□□□ -1.54
TRS85YDR108W MIF2P35201 549 aa5.4□□□□□ -1.54
TRS85YDR108W KRI1P42846 591 aaKnown RBP5.4□□□□□ -1.54
TRS85YDR108W PTC3P34221 468 aaKnown RBP5.39□□□□□ -1.55
TRS85YDR108W AIM44Q99299 758 aa5.39□□□□□ -1.55
TRS85YDR108W YRB30P53107 440 aaPredicted RBP5.38□□□□□ -1.55
TRS85YDR108W CLC1P17891 233 aa5.37□□□□□ -1.55
TRS85YDR108W GUT1P32190 709 aa5.37□□□□□ -1.55
TRS85YDR108W SOL3P38858 249 aa5.36□□□□□ -1.55
TRS85YDR108W ATH1P48016 1211 aa5.36□□□□□ -1.55
TRS85YDR108W SEC3P33332 1336 aaKnown RBP5.35□□□□□ -1.55
TRS85YDR108W QCR6P00127 147 aa5.35□□□□□ -1.55
TRS85YDR108W COQ8P27697 501 aa5.35□□□□□ -1.55
TRS85YDR108W VRP1P37370 817 aa5.35□□□□□ -1.55
TRS85YDR108W MID1P41821 548 aa5.35□□□□□ -1.55
TRS85YDR108W ENV11P53246 860 aa5.33□□□□□ -1.56
TRS85YDR108W DEF1P35732 738 aaKnown RBP5.33□□□□□ -1.56
TRS85YDR108W IME2P32581 645 aa5.32□□□□□ -1.56
TRS85YDR108W ELP4Q02884 456 aaKnown RBP5.32□□□□□ -1.56
TRS85YDR108W STH1P32597 1359 aa5.32□□□□□ -1.56
TRS85YDR108W FPR3P38911 411 aaKnown RBP5.32□□□□□ -1.56
TRS85YDR108W XDJ1P39102 459 aa5.32□□□□□ -1.56
TRS85YDR108W ARH1P48360 493 aa5.32□□□□□ -1.56
TRS85YDR108W NOP53Q12080 455 aaKnown RBP5.32□□□□□ -1.56
TRS85YDR108W RLF2Q12495 606 aa5.32□□□□□ -1.56
TRS85YDR108W ILV3P39522 585 aaKnown RBP5.31□□□□□ -1.56
TRS85YDR108W NUG1P40010 520 aaKnown RBP5.31□□□□□ -1.56
TRS85YDR108W YGR130CP53278 816 aa5.3□□□□□ -1.56
TRS85YDR108W MPH3P0CE00 602 aa5.29□□□□□ -1.56
TRS85YDR108W AI4P03878 556 aa5.28□□□□□ -1.56
TRS85YDR108W SPT7P35177 1332 aa5.27□□□□□ -1.57
TRS85YDR108W PRS1P32895 427 aaKnown RBP5.27□□□□□ -1.57
TRS85YDR108W RNA1P11745 407 aaKnown RBP5.26□□□□□ -1.57
TRS85YDR108W POL5P39985 1022 aaKnown RBP5.26□□□□□ -1.57
TRS85YDR108W PEX29Q03370 554 aa5.25□□□□□ -1.57
TRS85YDR108W EAF7P53911 425 aaKnown RBP5.24□□□□□ -1.57
TRS85YDR108W YGR273CP53329 174 aa5.24□□□□□ -1.57
TRS85YDR108W FPR4Q06205 392 aaPredicted RBP5.24□□□□□ -1.57
TRS85YDR108W PSH1Q12161 406 aa5.24□□□□□ -1.57
TRS85YDR108W MMS22Q06164 1454 aa5.23□□□□□ -1.57
TRS85YDR108W SPT23P35210 1082 aa5.23□□□□□ -1.57
TRS85YDR108W DPS1P04802 557 aaKnown RBP5.22□□□□□ -1.57
TRS85YDR108W HAP5Q02516 242 aa5.22□□□□□ -1.57
TRS85YDR108W SPT2P06843 333 aaPredicted RBP5.22□□□□□ -1.57
TRS85YDR108W OPY1P38271 328 aa5.22□□□□□ -1.57
TRS85YDR108W UFD4P33202 1483 aa5.22□□□□□ -1.57
TRS85YDR108W LEU3P08638 886 aa5.21□□□□□ -1.58
TRS85YDR108W RIX1P38883 763 aaPredicted RBP5.21□□□□□ -1.58
TRS85YDR108W MPC54Q08550 464 aa5.21□□□□□ -1.58
TRS85YDR108W CHD1P32657 1468 aa5.2□□□□□ -1.58
TRS85YDR108W BNI4P53858 892 aa5.2□□□□□ -1.58
TRS85YDR108W SAS10Q12136 610 aaPredicted RBP5.2□□□□□ -1.58
TRS85YDR108W FUN12P39730 1002 aaKnown RBP5.19□□□□□ -1.58
TRS85YDR108W SPP41P38904 1435 aa5.18□□□□□ -1.58
TRS85YDR108W SLI15P38283 698 aa5.18□□□□□ -1.58
TRS85YDR108W NAP1P25293 417 aaKnown RBP5.17□□□□□ -1.58
TRS85YDR108W YML082WQ04533 649 aaKnown RBP5.17□□□□□ -1.58
TRS85YDR108W ECM5Q03214 1411 aa5.17□□□□□ -1.58
TRS85YDR108W CFT1Q06632 1357 aaKnown RBP5.17□□□□□ -1.58
TRS85YDR108W SPC110P32380 944 aa5.17□□□□□ -1.58
TRS85YDR108W SNF7P39929 240 aaKnown RBP5.17□□□□□ -1.58
TRS85YDR108W DMA2P53924 522 aa5.17□□□□□ -1.58
TRS85YDR108W SRC1Q03707 834 aa5.17□□□□□ -1.58
TRS85YDR108W PAF1P38351 445 aa5.16□□□□□ -1.58
TRS85YDR108W NMA111P53920 997 aa5.16□□□□□ -1.58
TRS85YDR108W IOC4Q04213 475 aa5.16□□□□□ -1.58
TRS85YDR108W HSP82P02829 709 aaKnown RBP5.16□□□□□ -1.58
TRS85YDR108W RPC31P17890 251 aa5.16□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 44.1 ms