RNA–Protein interactions for RNA: YDL113C

ATG20, Transcript of Sorting nexin family member, yeastyeast

Gene ATG20, Length 1,923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG20YDL113C ULS1Q08562 1619 aa7.58□□□□□ -1.2
ATG20YDL113C RTT106P40161 455 aa7.57□□□□□ -1.2
ATG20YDL113C IKI3Q06706 1349 aaKnown RBP7.57□□□□□ -1.2
ATG20YDL113C SNT2P53127 1403 aa7.55□□□□□ -1.2
ATG20YDL113C TY1B-JR2P47100 1755 aaKnown RBP7.54□□□□□ -1.2
ATG20YDL113C TY1B-ER2Q03619 1755 aa7.54□□□□□ -1.2
ATG20YDL113C TY1B-MR1Q04214 1755 aa7.54□□□□□ -1.2
ATG20YDL113C TY1B-MR2Q04670 1755 aaKnown RBP7.54□□□□□ -1.2
ATG20YDL113C TY1B-LR1Q12088 1755 aaKnown RBP7.54□□□□□ -1.2
ATG20YDL113C TY1B-NL1Q12112 1755 aa7.54□□□□□ -1.2
ATG20YDL113C TY1B-GR1Q12141 1755 aa7.54□□□□□ -1.2
ATG20YDL113C TY1B-BLQ12490 1755 aa7.54□□□□□ -1.2
ATG20YDL113C RPA190P10964 1664 aaKnown RBP7.53□□□□□ -1.2
ATG20YDL113C SSM4P40318 1319 aa7.52□□□□□ -1.21
ATG20YDL113C TY3B-GQ99315 1547 aa7.49□□□□□ -1.21
ATG20YDL113C NUP159P40477 1460 aa7.48□□□□□ -1.21
ATG20YDL113C NTE1Q04958 1679 aa7.47□□□□□ -1.21
ATG20YDL113C PTP3P40048 928 aa7.46□□□□□ -1.22
ATG20YDL113C VPS15P22219 1454 aa7.45□□□□□ -1.22
ATG20YDL113C GEA2P39993 1459 aaKnown RBP7.45□□□□□ -1.22
ATG20YDL113C RPO21P04050 1733 aaKnown RBP7.45□□□□□ -1.22
ATG20YDL113C MET10P39692 1035 aa7.43□□□□□ -1.22
ATG20YDL113C CKB1P43639 278 aa7.43□□□□□ -1.22
ATG20YDL113C NUP170P38181 1502 aa7.41□□□□□ -1.22
ATG20YDL113C IRC20Q06554 1556 aa7.4□□□□□ -1.22
ATG20YDL113C GDB1Q06625 1536 aa7.4□□□□□ -1.23
ATG20YDL113C YBT1P32386 1661 aa7.39□□□□□ -1.23
ATG20YDL113C MET5P47169 1442 aa7.39□□□□□ -1.23
ATG20YDL113C NUP157P40064 1391 aaKnown RBP7.39□□□□□ -1.23
ATG20YDL113C YRF1-1P0CX20 1796 aa7.38□□□□□ -1.23
ATG20YDL113C YRF1-5P0CX21 1796 aa7.38□□□□□ -1.23
ATG20YDL113C YRF1-8P0CX22 1796 aa7.38□□□□□ -1.23
ATG20YDL113C CAT8P39113 1433 aa7.38□□□□□ -1.23
ATG20YDL113C PDR10P51533 1564 aa7.36□□□□□ -1.23
ATG20YDL113C SPO14P36126 1683 aa7.36□□□□□ -1.23
ATG20YDL113C BUD3P25558 1636 aa7.34□□□□□ -1.23
ATG20YDL113C PDR12Q02785 1511 aa7.33□□□□□ -1.24
ATG20YDL113C ARO1P08566 1588 aaKnown RBP7.33□□□□□ -1.24
ATG20YDL113C SRB8P25648 1427 aa7.32□□□□□ -1.24
ATG20YDL113C BUD21Q08492 214 aaPredicted RBP7.3□□□□□ -1.24
ATG20YDL113C LEU3P08638 886 aa7.28□□□□□ -1.24
ATG20YDL113C YSP2Q06681 1438 aa7.28□□□□□ -1.24
ATG20YDL113C RPL17AP05740 184 aaKnown RBP7.27□□□□□ -1.25
ATG20YDL113C RPL17BP46990 184 aaKnown RBP7.27□□□□□ -1.25
ATG20YDL113C ISW2Q08773 1120 aa7.27□□□□□ -1.25
ATG20YDL113C IQG1Q12280 1495 aa7.25□□□□□ -1.25
ATG20YDL113C BNR1P40450 1375 aa7.23□□□□□ -1.25
ATG20YDL113C SSP1P38871 571 aa7.23□□□□□ -1.25
ATG20YDL113C LTE1P07866 1435 aa7.22□□□□□ -1.25
ATG20YDL113C RIM101P33400 625 aa7.21□□□□□ -1.25
ATG20YDL113C RPG1P38249 964 aaKnown RBP7.2□□□□□ -1.26
ATG20YDL113C ITT1Q04638 464 aa7.2□□□□□ -1.26
ATG20YDL113C MMS1Q06211 1407 aa7.19□□□□□ -1.26
ATG20YDL113C DRS2P39524 1355 aa7.19□□□□□ -1.26
ATG20YDL113C NOP7P53261 605 aaKnown RBP7.17□□□□□ -1.26
ATG20YDL113C SPT21P35209 758 aa7.16□□□□□ -1.26
ATG20YDL113C FAP1P53971 965 aa7.16□□□□□ -1.26
ATG20YDL113C POL5P39985 1022 aaKnown RBP7.15□□□□□ -1.26
ATG20YDL113C GCN2P15442 1659 aa7.15□□□□□ -1.26
ATG20YDL113C ORC1P54784 914 aaPredicted RBP7.15□□□□□ -1.27
ATG20YDL113C PAF1P38351 445 aa7.13□□□□□ -1.27
ATG20YDL113C SEC7P11075 2009 aaKnown RBP7.13□□□□□ -1.27
ATG20YDL113C DOP1Q03921 1698 aa7.1□□□□□ -1.27
ATG20YDL113C BNI1P41832 1953 aa7.09□□□□□ -1.27
ATG20YDL113C TRM3Q07527 1436 aa7.09□□□□□ -1.27
ATG20YDL113C PDR11P40550 1411 aa7.09□□□□□ -1.27
ATG20YDL113C YOR093CQ12275 1648 aa7.08□□□□□ -1.28
ATG20YDL113C REB1P21538 810 aa7.07□□□□□ -1.28
ATG20YDL113C DMA2P53924 522 aa7.07□□□□□ -1.28
ATG20YDL113C TYS1P36421 394 aaKnown RBP7.06□□□□□ -1.28
ATG20YDL113C PDR5P33302 1511 aaKnown RBP7.06□□□□□ -1.28
ATG20YDL113C CHC1P22137 1653 aaKnown RBP7.06□□□□□ -1.28
ATG20YDL113C VMR1P38735 1592 aa7.06□□□□□ -1.28
ATG20YDL113C TAF5P38129 798 aa7.05□□□□□ -1.28
ATG20YDL113C OXP1P28273 1286 aa7.04□□□□□ -1.28
ATG20YDL113C RAV1P47104 1357 aa7.03□□□□□ -1.28
ATG20YDL113C ABP1P15891 592 aaKnown RBP7.03□□□□□ -1.28
ATG20YDL113C NSR1P27476 414 aaKnown RBP RIP-Chip data7.03□□□□□ -1.28not detected
ATG20YDL113C IML1P47170 1584 aa7.02□□□□□ -1.29
ATG20YDL113C RTC1Q08281 1341 aa7.02□□□□□ -1.29
ATG20YDL113C IPL1P38991 367 aa7.01□□□□□ -1.29
ATG20YDL113C SPT7P35177 1332 aa7.01□□□□□ -1.29
ATG20YDL113C DNF2Q12675 1612 aa7.01□□□□□ -1.29
ATG20YDL113C NUP188P52593 1655 aaKnown RBP7□□□□□ -1.29
ATG20YDL113C KIP3P53086 805 aaKnown RBP6.99□□□□□ -1.29
ATG20YDL113C YLR271WQ06152 274 aa6.98□□□□□ -1.29
ATG20YDL113C YAH1Q12184 172 aaKnown RBP6.98□□□□□ -1.29
ATG20YDL113C YAP3P38749 330 aa6.97□□□□□ -1.29
ATG20YDL113C URN1Q06525 465 aaKnown RBP6.97□□□□□ -1.29
ATG20YDL113C PRI1P10363 409 aa6.97□□□□□ -1.29
ATG20YDL113C RPN1P38764 993 aaKnown RBP6.97□□□□□ -1.29
ATG20YDL113C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
ATG20YDL113C ESL2P36168 1195 aa6.96□□□□□ -1.3
ATG20YDL113C PSD2P53037 1138 aaKnown RBP6.95□□□□□ -1.3
ATG20YDL113C RAD9P14737 1309 aa6.93□□□□□ -1.3
ATG20YDL113C NUP192P47054 1683 aa6.93□□□□□ -1.3
ATG20YDL113C MHP1P43638 1398 aa6.92□□□□□ -1.3
ATG20YDL113C TAF8Q03750 510 aa6.92□□□□□ -1.3
ATG20YDL113C CAB1Q04430 367 aa6.92□□□□□ -1.3
ATG20YDL113C TY3B-IQ7LHG5 1498 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 49.6 ms