RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C BMT6Q12291 365 aa7.8□□□□□ -1.16
ASM4YDL088C PTC3P34221 468 aaKnown RBP7.8□□□□□ -1.16
ASM4YDL088C EDS1P38073 919 aa7.8□□□□□ -1.16
ASM4YDL088C SEC61P32915 480 aa7.79□□□□□ -1.16
ASM4YDL088C JIP4Q03361 876 aa7.78□□□□□ -1.16
ASM4YDL088C YEL023CP39992 682 aa7.76□□□□□ -1.17
ASM4YDL088C GUT1P32190 709 aa7.75□□□□□ -1.17
ASM4YDL088C PTC4P38089 393 aa7.74□□□□□ -1.17
ASM4YDL088C DAN4P47179 1161 aa7.72□□□□□ -1.17
ASM4YDL088C SAP30P38429 201 aa7.67□□□□□ -1.18
ASM4YDL088C NOP53Q12080 455 aaKnown RBP7.67□□□□□ -1.18
ASM4YDL088C YDL129WQ07555 291 aa7.66□□□□□ -1.18
ASM4YDL088C SET1P38827 1080 aaKnown RBP7.65□□□□□ -1.18
ASM4YDL088C PML39Q03760 334 aa7.62□□□□□ -1.19
ASM4YDL088C SOL3P38858 249 aa7.59□□□□□ -1.19
ASM4YDL088C MPH3P0CE00 602 aa7.56□□□□□ -1.2
ASM4YDL088C YGR273CP53329 174 aa7.56□□□□□ -1.2
ASM4YDL088C NST1P53935 1240 aa7.56□□□□□ -1.2
ASM4YDL088C AI4P03878 556 aa7.55□□□□□ -1.2
ASM4YDL088C MID1P41821 548 aa7.53□□□□□ -1.2
ASM4YDL088C PEX29Q03370 554 aa7.53□□□□□ -1.2
ASM4YDL088C CHL1P22516 861 aaPredicted RBP7.51□□□□□ -1.21
ASM4YDL088C PRE3P38624 215 aa7.51□□□□□ -1.21
ASM4YDL088C ELP4Q02884 456 aaKnown RBP7.5□□□□□ -1.21
ASM4YDL088C ILV3P39522 585 aaKnown RBP7.49□□□□□ -1.21
ASM4YDL088C IFH1P39520 1085 aa7.48□□□□□ -1.21
ASM4YDL088C KEX1P09620 729 aa7.44□□□□□ -1.22
ASM4YDL088C VHR2P40041 505 aa7.44□□□□□ -1.22
ASM4YDL088C YDR344CQ05510 147 aa7.44□□□□□ -1.22
ASM4YDL088C SLI15P38283 698 aa7.42□□□□□ -1.22
ASM4YDL088C ARH1P48360 493 aa7.42□□□□□ -1.22
ASM4YDL088C BCK2P33306 851 aa7.42□□□□□ -1.22
ASM4YDL088C YLR326WQ06170 240 aaKnown RBP7.4□□□□□ -1.22
ASM4YDL088C MPC54Q08550 464 aa7.39□□□□□ -1.23
ASM4YDL088C UBP14P38237 781 aaKnown RBP7.38□□□□□ -1.23
ASM4YDL088C DMA1P38823 416 aa7.38□□□□□ -1.23
ASM4YDL088C VPS70P47161 811 aa7.38□□□□□ -1.23
ASM4YDL088C HAP5Q02516 242 aa7.38□□□□□ -1.23
ASM4YDL088C RAD54P32863 898 aa7.37□□□□□ -1.23
ASM4YDL088C SPT23P35210 1082 aa7.37□□□□□ -1.23
ASM4YDL088C DPL1Q05567 589 aa7.37□□□□□ -1.23
ASM4YDL088C YPR148CQ06523 435 aa7.37□□□□□ -1.23
ASM4YDL088C VRP1P37370 817 aa7.36□□□□□ -1.23
ASM4YDL088C KIC1P38692 1080 aa7.36□□□□□ -1.23
ASM4YDL088C NMA111P53920 997 aa7.35□□□□□ -1.23
ASM4YDL088C REF2P42073 533 aaPredicted RBP7.34□□□□□ -1.23
ASM4YDL088C PCS60P38137 543 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24not detected
ASM4YDL088C RPP1BP10622 106 aaKnown RBP7.32□□□□□ -1.24
ASM4YDL088C CDC73Q06697 393 aa7.32□□□□□ -1.24
ASM4YDL088C PTC2P39966 464 aaKnown RBP7.31□□□□□ -1.24
ASM4YDL088C BNI4P53858 892 aa7.31□□□□□ -1.24
ASM4YDL088C ISU2Q12056 156 aa7.29□□□□□ -1.24
ASM4YDL088C YDR090CQ03193 310 aa7.28□□□□□ -1.24
ASM4YDL088C XDJ1P39102 459 aa7.25□□□□□ -1.25
ASM4YDL088C YML082WQ04533 649 aaKnown RBP7.24□□□□□ -1.25
ASM4YDL088C CKB1P43639 278 aa7.23□□□□□ -1.25
ASM4YDL088C PEX21P50091 288 aa7.23□□□□□ -1.25
ASM4YDL088C MAK21Q12176 1025 aaKnown RBP7.22□□□□□ -1.25
ASM4YDL088C COX6P00427 148 aa7.2□□□□□ -1.26
ASM4YDL088C PBS2P08018 668 aa7.18□□□□□ -1.26
ASM4YDL088C PDR1P12383 1068 aa7.16□□□□□ -1.26
ASM4YDL088C CSC1Q06538 782 aa7.16□□□□□ -1.26
ASM4YDL088C YRR1Q12172 810 aa7.16□□□□□ -1.26
ASM4YDL088C SAS10Q12136 610 aaPredicted RBP7.15□□□□□ -1.27
ASM4YDL088C YPR015CQ12531 247 aa7.14□□□□□ -1.27
ASM4YDL088C RQC2Q12532 1038 aaKnown RBP7.14□□□□□ -1.27
ASM4YDL088C RAM1P22007 431 aa7.13□□□□□ -1.27
ASM4YDL088C GYP1Q08484 637 aa7.13□□□□□ -1.27
ASM4YDL088C TFB4Q12004 338 aa7.13□□□□□ -1.27
ASM4YDL088C ORC6P38826 435 aa7.12□□□□□ -1.27
ASM4YDL088C TUM1Q08686 304 aaKnown RBP7.12□□□□□ -1.27
ASM4YDL088C DPS1P04802 557 aaKnown RBP7.12□□□□□ -1.27
ASM4YDL088C GAP1P19145 602 aaPredicted RBP7.11□□□□□ -1.27
ASM4YDL088C SPB4P25808 606 aaPredicted RBP7.11□□□□□ -1.27
ASM4YDL088C MAM3Q12296 706 aa7.1□□□□□ -1.27
ASM4YDL088C NPL4P33755 580 aa7.07□□□□□ -1.28
ASM4YDL088C MVP1P40959 511 aaKnown RBP7.07□□□□□ -1.28
ASM4YDL088C NUD1P32336 851 aa7.05□□□□□ -1.28
ASM4YDL088C YPR109WQ06104 294 aa7.05□□□□□ -1.28
ASM4YDL088C RGR1P19263 1082 aa7.04□□□□□ -1.28
ASM4YDL088C DSF2P38213 736 aa7.04□□□□□ -1.28
ASM4YDL088C SAS4Q04003 481 aa7.04□□□□□ -1.28
ASM4YDL088C IES2P40154 320 aa7.03□□□□□ -1.28
ASM4YDL088C STR2P47164 639 aa7.02□□□□□ -1.29
ASM4YDL088C ISM1P48526 1002 aa7.02□□□□□ -1.29
ASM4YDL088C BUD20Q08004 166 aaPredicted RBP7.02□□□□□ -1.29
ASM4YDL088C PRT1P06103 763 aaKnown RBP7.01□□□□□ -1.29
ASM4YDL088C PSE1P32337 1089 aaKnown RBP7.01□□□□□ -1.29
ASM4YDL088C GCD11P32481 527 aaKnown RBP7□□□□□ -1.29
ASM4YDL088C MRF1P30775 413 aaPredicted RBP6.98□□□□□ -1.29
ASM4YDL088C RAS1P01119 309 aa6.95□□□□□ -1.3
ASM4YDL088C YEL077CQ3E7X8 1277 aa6.95□□□□□ -1.3
ASM4YDL088C AMS1P22855 1083 aa6.95□□□□□ -1.3
ASM4YDL088C CLB5P30283 435 aa6.95□□□□□ -1.3
ASM4YDL088C NUP42P49686 430 aaKnown RBP6.95□□□□□ -1.3
ASM4YDL088C SPT16P32558 1035 aaKnown RBP6.94□□□□□ -1.3
ASM4YDL088C ERG12P07277 443 aa6.92□□□□□ -1.3
ASM4YDL088C DIT2P21595 489 aa6.92□□□□□ -1.3
ASM4YDL088C KEX2P13134 814 aa6.91□□□□□ -1.3
ASM4YDL088C TEA1P47988 759 aa6.91□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms