RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W YLR326WQ06170 240 aaKnown RBP7.42□□□□□ -1.22
UBC9YDL064W NST1P53935 1240 aa7.41□□□□□ -1.22
UBC9YDL064W YDR090CQ03193 310 aa7.41□□□□□ -1.22
UBC9YDL064W RPN1P38764 993 aaKnown RBP7.4□□□□□ -1.22
UBC9YDL064W VNX1P42839 908 aa7.4□□□□□ -1.22
UBC9YDL064W COX6P00427 148 aa7.39□□□□□ -1.23
UBC9YDL064W IES2P40154 320 aa7.39□□□□□ -1.23
UBC9YDL064W MAM3Q12296 706 aa7.39□□□□□ -1.23
UBC9YDL064W MSB4Q12317 492 aa7.38□□□□□ -1.23
UBC9YDL064W HTA1P04911 132 aaKnown RBP7.37□□□□□ -1.23
UBC9YDL064W HTA2P04912 132 aa7.37□□□□□ -1.23
UBC9YDL064W DIT2P21595 489 aa7.37□□□□□ -1.23
UBC9YDL064W KEX1P09620 729 aa7.36□□□□□ -1.23
UBC9YDL064W ILV3P39522 585 aaKnown RBP7.36□□□□□ -1.23
UBC9YDL064W NUP42P49686 430 aaKnown RBP7.36□□□□□ -1.23
UBC9YDL064W TRP5P00931 707 aaKnown RBP7.35□□□□□ -1.23
UBC9YDL064W MAK21Q12176 1025 aaKnown RBP7.35□□□□□ -1.23
UBC9YDL064W ABP1P15891 592 aaKnown RBP7.34□□□□□ -1.23
UBC9YDL064W PCS60P38137 543 aaKnown RBP RIP-Chip data7.34□□□□□ -1.23not detected
UBC9YDL064W UBP9P39967 754 aa7.33□□□□□ -1.24
UBC9YDL064W TIF11P38912 153 aaKnown RBP7.32□□□□□ -1.24
UBC9YDL064W ULI1P43604 169 aa7.32□□□□□ -1.24
UBC9YDL064W MPH3P0CE00 602 aa7.31□□□□□ -1.24
UBC9YDL064W RAD54P32863 898 aa7.31□□□□□ -1.24
UBC9YDL064W YEL023CP39992 682 aa7.31□□□□□ -1.24
UBC9YDL064W YNR021WP53723 404 aaKnown RBP7.31□□□□□ -1.24
UBC9YDL064W SPP1Q03012 353 aa7.31□□□□□ -1.24
UBC9YDL064W GLC3P32775 704 aa7.3□□□□□ -1.24
UBC9YDL064W EAP1P36041 632 aaKnown RBP7.3□□□□□ -1.24
UBC9YDL064W KIC1P38692 1080 aa7.29□□□□□ -1.24
UBC9YDL064W AI4P03878 556 aa7.28□□□□□ -1.24
UBC9YDL064W IOC2Q12072 812 aa7.28□□□□□ -1.24
UBC9YDL064W DAN4P47179 1161 aa7.27□□□□□ -1.25
UBC9YDL064W PTC4P38089 393 aa7.26□□□□□ -1.25
UBC9YDL064W KIN1P13185 1064 aa7.24□□□□□ -1.25
UBC9YDL064W SLI15P38283 698 aa7.24□□□□□ -1.25
UBC9YDL064W BUD31P25337 157 aaPredicted RBP7.22□□□□□ -1.25
UBC9YDL064W ORC6P38826 435 aa7.21□□□□□ -1.26
UBC9YDL064W DMA2P53924 522 aa7.21□□□□□ -1.26
UBC9YDL064W JIP4Q03361 876 aa7.21□□□□□ -1.26
UBC9YDL064W LDB19Q12502 818 aa7.21□□□□□ -1.26
UBC9YDL064W RTG1P32607 177 aa7.19□□□□□ -1.26
UBC9YDL064W MID1P41821 548 aa7.19□□□□□ -1.26
UBC9YDL064W YNL035CP53962 389 aaKnown RBP7.19□□□□□ -1.26
UBC9YDL064W AIM7Q12156 149 aa7.19□□□□□ -1.26
UBC9YDL064W ATF2P53296 535 aa7.18□□□□□ -1.26
UBC9YDL064W CDC73Q06697 393 aa7.18□□□□□ -1.26
UBC9YDL064W PSE1P32337 1089 aaKnown RBP7.16□□□□□ -1.26
UBC9YDL064W PML39Q03760 334 aa7.16□□□□□ -1.26
UBC9YDL064W TAF7Q05021 590 aa7.16□□□□□ -1.26
UBC9YDL064W RGR1P19263 1082 aa7.15□□□□□ -1.26
UBC9YDL064W GAP1P19145 602 aaPredicted RBP7.14□□□□□ -1.27
UBC9YDL064W GUA1P38625 525 aaKnown RBP7.12□□□□□ -1.27
UBC9YDL064W MVP1P40959 511 aaKnown RBP7.12□□□□□ -1.27
UBC9YDL064W SEC61P32915 480 aa7.11□□□□□ -1.27
UBC9YDL064W NCR1Q12200 1170 aa7.11□□□□□ -1.27
UBC9YDL064W YPR109WQ06104 294 aa7.09□□□□□ -1.27
UBC9YDL064W MPC54Q08550 464 aa7.09□□□□□ -1.27
UBC9YDL064W PEX29Q03370 554 aa7.08□□□□□ -1.28
UBC9YDL064W CSC1Q06538 782 aa7.08□□□□□ -1.28
UBC9YDL064W TEA1P47988 759 aa7.07□□□□□ -1.28
UBC9YDL064W DPL1Q05567 589 aa7.07□□□□□ -1.28
UBC9YDL064W FKH1P40466 484 aa7.06□□□□□ -1.28
UBC9YDL064W YDR344CQ05510 147 aa7.06□□□□□ -1.28
UBC9YDL064W RPP1BP10622 106 aaKnown RBP7.04□□□□□ -1.28
UBC9YDL064W YDL129WQ07555 291 aa7.04□□□□□ -1.28
UBC9YDL064W TUM1Q08686 304 aaKnown RBP7.04□□□□□ -1.28
UBC9YDL064W TFG1P41895 735 aaPredicted RBP7.03□□□□□ -1.28
UBC9YDL064W PEX21P50091 288 aa7.03□□□□□ -1.28
UBC9YDL064W NMA111P53920 997 aa7.03□□□□□ -1.28
UBC9YDL064W TFB4Q12004 338 aa7.03□□□□□ -1.28
UBC9YDL064W AIR2Q12476 344 aaKnown RBP7.03□□□□□ -1.28
UBC9YDL064W KTR1P27810 393 aaKnown RBP7.02□□□□□ -1.29
UBC9YDL064W NIS1P53939 407 aa7.02□□□□□ -1.29
UBC9YDL064W TYW1Q08960 810 aaKnown RBP7.02□□□□□ -1.29
UBC9YDL064W YRR1Q12172 810 aa7.02□□□□□ -1.29
UBC9YDL064W SAP30P38429 201 aa7.01□□□□□ -1.29
UBC9YDL064W CSN12P47130 423 aa7.01□□□□□ -1.29
UBC9YDL064W ISU2Q12056 156 aa7.01□□□□□ -1.29
UBC9YDL064W CLB5P30283 435 aa6.99□□□□□ -1.29
UBC9YDL064W SIS1P25294 352 aaKnown RBP6.98□□□□□ -1.29
UBC9YDL064W SCJ1P25303 377 aa6.98□□□□□ -1.29
UBC9YDL064W FPK1P53739 893 aa6.98□□□□□ -1.29
UBC9YDL064W TFB3Q03290 321 aa6.98□□□□□ -1.29
UBC9YDL064W PDR1P12383 1068 aa6.97□□□□□ -1.29
UBC9YDL064W HPC2Q01448 625 aa6.96□□□□□ -1.3
UBC9YDL064W PKC1P24583 1151 aa6.95□□□□□ -1.3
UBC9YDL064W SIT4P20604 311 aa6.94□□□□□ -1.3
UBC9YDL064W HAP5Q02516 242 aa6.94□□□□□ -1.3
UBC9YDL064W ESS1P22696 170 aa6.93□□□□□ -1.3
UBC9YDL064W ARH1P48360 493 aa6.93□□□□□ -1.3
UBC9YDL064W HST2P53686 357 aa6.93□□□□□ -1.3
UBC9YDL064W YMR196WQ04336 1088 aa6.93□□□□□ -1.3
UBC9YDL064W ERF2Q06551 359 aa6.93□□□□□ -1.3
UBC9YDL064W GLN1P32288 370 aaKnown RBP6.92□□□□□ -1.3
UBC9YDL064W MMP1Q12372 583 aa6.92□□□□□ -1.3
UBC9YDL064W ELP4Q02884 456 aaKnown RBP6.91□□□□□ -1.3
UBC9YDL064W SSA2P10592 639 aaKnown RBP6.9□□□□□ -1.3
UBC9YDL064W KEX2P13134 814 aa6.9□□□□□ -1.3
UBC9YDL064W YJU3P28321 313 aa6.9□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms