RNA–Protein interactions for RNA: YDL025C

RTK1, Transcript of Putative protein kinase, potentially phosphorylated by Cdc28p, yeastyeast

Gene RTK1, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTK1YDL025C YFR006WP43590 535 aa6.93□□□□□ -1.3
RTK1YDL025C PTC3P34221 468 aaKnown RBP6.88□□□□□ -1.31
RTK1YDL025C HPC2Q01448 625 aa6.87□□□□□ -1.31
RTK1YDL025C PIB1Q06651 286 aa6.87□□□□□ -1.31
RTK1YDL025C MON2P48563 1636 aaPredicted RBP6.86□□□□□ -1.31
RTK1YDL025C TFB3Q03290 321 aa6.85□□□□□ -1.31
RTK1YDL025C VMA1P17255 1071 aaKnown RBP6.83□□□□□ -1.32
RTK1YDL025C VHR2P40041 505 aa6.83□□□□□ -1.32
RTK1YDL025C BRL1P38770 471 aa6.82□□□□□ -1.32
RTK1YDL025C SAM3Q08986 587 aa6.81□□□□□ -1.32
RTK1YDL025C YDR090CQ03193 310 aa6.79□□□□□ -1.32
RTK1YDL025C INO80P53115 1489 aa6.79□□□□□ -1.32
RTK1YDL025C KIC1P38692 1080 aa6.79□□□□□ -1.32
RTK1YDL025C PKC1P24583 1151 aa6.78□□□□□ -1.32
RTK1YDL025C UBP14P38237 781 aaKnown RBP6.78□□□□□ -1.32
RTK1YDL025C SSA2P10592 639 aaKnown RBP6.77□□□□□ -1.33
RTK1YDL025C CSN12P47130 423 aa6.77□□□□□ -1.33
RTK1YDL025C ATH1P48016 1211 aa6.77□□□□□ -1.33
RTK1YDL025C YLR326WQ06170 240 aaKnown RBP6.75□□□□□ -1.33
RTK1YDL025C YJL007CP47080 104 aa6.74□□□□□ -1.33
RTK1YDL025C SSA1P10591 642 aaKnown RBP6.73□□□□□ -1.33
RTK1YDL025C BIM1P40013 344 aa6.73□□□□□ -1.33
RTK1YDL025C YML020WQ03722 664 aa6.73□□□□□ -1.33
RTK1YDL025C GRE2Q12068 342 aaKnown RBP6.73□□□□□ -1.33
RTK1YDL025C YBL029C-AQ3E756 94 aa6.73□□□□□ -1.33
RTK1YDL025C PSE1P32337 1089 aaKnown RBP6.73□□□□□ -1.33
RTK1YDL025C GTT3P39996 337 aa6.73□□□□□ -1.33
RTK1YDL025C VNX1P42839 908 aa6.73□□□□□ -1.33
RTK1YDL025C GUT1P32190 709 aa6.72□□□□□ -1.33
RTK1YDL025C UBP9P39967 754 aa6.72□□□□□ -1.33
RTK1YDL025C SUB2Q07478 446 aaKnown RBP6.72□□□□□ -1.33
RTK1YDL025C YOL036WQ08206 761 aa6.72□□□□□ -1.33
RTK1YDL025C GEF1P37020 779 aa6.71□□□□□ -1.34
RTK1YDL025C RAD54P32863 898 aa6.7□□□□□ -1.34
RTK1YDL025C SLX8P40072 274 aa6.7□□□□□ -1.34
RTK1YDL025C ATG32P40458 529 aa6.69□□□□□ -1.34
RTK1YDL025C YGR273CP53329 174 aa6.69□□□□□ -1.34
RTK1YDL025C MSB4Q12317 492 aa6.69□□□□□ -1.34
RTK1YDL025C GLN1P32288 370 aaKnown RBP6.68□□□□□ -1.34
RTK1YDL025C PCS60P38137 543 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
RTK1YDL025C TEA1P47988 759 aa6.68□□□□□ -1.34
RTK1YDL025C WSC3Q12215 556 aa6.68□□□□□ -1.34
RTK1YDL025C KEX1P09620 729 aa6.67□□□□□ -1.34
RTK1YDL025C RPL34BP40525 121 aaKnown RBP6.67□□□□□ -1.34
RTK1YDL025C SET4P42948 560 aa6.66□□□□□ -1.34
RTK1YDL025C GYP5Q12344 894 aa6.66□□□□□ -1.34
RTK1YDL025C NST1P53935 1240 aa6.66□□□□□ -1.34
RTK1YDL025C SSA4P22202 642 aaKnown RBP6.65□□□□□ -1.34
RTK1YDL025C TYW1Q08960 810 aaKnown RBP6.65□□□□□ -1.34
RTK1YDL025C SOL3P38858 249 aa6.64□□□□□ -1.35
RTK1YDL025C SIS1P25294 352 aaKnown RBP6.64□□□□□ -1.35
RTK1YDL025C KTR1P27810 393 aaKnown RBP6.64□□□□□ -1.35
RTK1YDL025C NOP8Q08287 484 aaPredicted RBP6.64□□□□□ -1.35
RTK1YDL025C TIF1P10081 395 aaKnown RBP6.63□□□□□ -1.35
RTK1YDL025C TIF11P38912 153 aaKnown RBP6.63□□□□□ -1.35
RTK1YDL025C YBL036CP38197 257 aa6.62□□□□□ -1.35
RTK1YDL025C IOC2Q12072 812 aa6.62□□□□□ -1.35
RTK1YDL025C ORC6P38826 435 aa6.62□□□□□ -1.35
RTK1YDL025C ERG12P07277 443 aa6.61□□□□□ -1.35
RTK1YDL025C SPP1Q03012 353 aa6.6□□□□□ -1.35
RTK1YDL025C EAP1P36041 632 aaKnown RBP6.6□□□□□ -1.35
RTK1YDL025C TRP5P00931 707 aaKnown RBP6.59□□□□□ -1.35
RTK1YDL025C RGR1P19263 1082 aa6.59□□□□□ -1.35
RTK1YDL025C CPS1P27614 576 aa6.59□□□□□ -1.35
RTK1YDL025C DCW1P36091 449 aa6.59□□□□□ -1.35
RTK1YDL025C YPR204WQ08995 1032 aa6.59□□□□□ -1.35
RTK1YDL025C ULI1P43604 169 aa6.58□□□□□ -1.36
RTK1YDL025C RTG2P32608 588 aaKnown RBP6.58□□□□□ -1.36
RTK1YDL025C HTA1P04911 132 aaKnown RBP6.57□□□□□ -1.36
RTK1YDL025C HTA2P04912 132 aa6.57□□□□□ -1.36
RTK1YDL025C CLB5P30283 435 aa6.57□□□□□ -1.36
RTK1YDL025C YMR196WQ04336 1088 aa6.57□□□□□ -1.36
RTK1YDL025C RPL34AP87262 121 aaPredicted RBP6.56□□□□□ -1.36
RTK1YDL025C BIO2P32451 375 aa6.56□□□□□ -1.36
RTK1YDL025C MVP1P40959 511 aaKnown RBP6.56□□□□□ -1.36
RTK1YDL025C DAN4P47179 1161 aa6.56□□□□□ -1.36
RTK1YDL025C NIS1P53939 407 aa6.56□□□□□ -1.36
RTK1YDL025C PKH3Q03306 898 aaPredicted RBP6.56□□□□□ -1.36
RTK1YDL025C TTI1P36097 1038 aa6.55□□□□□ -1.36
RTK1YDL025C FPK1P53739 893 aa6.55□□□□□ -1.36
RTK1YDL025C YNL108CP53929 270 aa6.55□□□□□ -1.36
RTK1YDL025C RAD59Q12223 238 aa6.54□□□□□ -1.36
RTK1YDL025C MMP1Q12372 583 aa6.54□□□□□ -1.36
RTK1YDL025C ILV3P39522 585 aaKnown RBP6.53□□□□□ -1.36
RTK1YDL025C HST2P53686 357 aa6.53□□□□□ -1.36
RTK1YDL025C ESS1P22696 170 aa6.53□□□□□ -1.36
RTK1YDL025C SCJ1P25303 377 aa6.53□□□□□ -1.36
RTK1YDL025C SLD2P34252 453 aa6.53□□□□□ -1.36
RTK1YDL025C YEL023CP39992 682 aa6.53□□□□□ -1.36
RTK1YDL025C CSE4P36012 229 aa6.52□□□□□ -1.37
RTK1YDL025C PTC4P38089 393 aa6.52□□□□□ -1.37
RTK1YDL025C MPH3P0CE00 602 aa6.51□□□□□ -1.37
RTK1YDL025C YPR109WQ06104 294 aa6.51□□□□□ -1.37
RTK1YDL025C AIM44Q99299 758 aa6.51□□□□□ -1.37
RTK1YDL025C AI4P03878 556 aa6.51□□□□□ -1.37
RTK1YDL025C JIP4Q03361 876 aa6.51□□□□□ -1.37
RTK1YDL025C NOB1Q08444 459 aaKnown RBP6.51□□□□□ -1.37
RTK1YDL025C LDB19Q12502 818 aa6.51□□□□□ -1.37
RTK1YDL025C RPP1BP10622 106 aaKnown RBP6.49□□□□□ -1.37
RTK1YDL025C ARG8P18544 423 aa6.49□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms